RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 E9PCH4 1651 aa11.11□□□□□ -0.63
TOPBP1-207ENST00000509162 UHRF1BP1Q6BDS2 1440 aa11.1□□□□□ -0.63
TOPBP1-207ENST00000509162 FBXO31Q5XUX0 539 aaPredicted RBP11.1□□□□□ -0.63
TOPBP1-207ENST00000509162 NEURL4Q96JN8 1562 aa11.1□□□□□ -0.63
TOPBP1-207ENST00000509162 HFM1A2PYH4 1435 aa11.09□□□□□ -0.63
TOPBP1-207ENST00000509162 ARHGAP31Q2M1Z3 1444 aa11.09□□□□□ -0.63
TOPBP1-207ENST00000509162 ITGAEP38570 1179 aa11.09□□□□□ -0.63
TOPBP1-207ENST00000509162 UGGT1Q9NYU2 1555 aa11.08□□□□□ -0.64
TOPBP1-207ENST00000509162 HAX1O00165 279 aa11.08□□□□□ -0.64
TOPBP1-207ENST00000509162 PIK3C2BO00750 1634 aa11.08□□□□□ -0.64
TOPBP1-207ENST00000509162 NOS1P29475 1434 aa11.08□□□□□ -0.64
TOPBP1-207ENST00000509162 A2ML1A8K2U0 1454 aa11.07□□□□□ -0.64
TOPBP1-207ENST00000509162 UBR1Q8IWV7 1749 aa11.07□□□□□ -0.64
TOPBP1-207ENST00000509162 TNRQ92752 1358 aa11.07□□□□□ -0.64
TOPBP1-207ENST00000509162 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
TOPBP1-207ENST00000509162 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
TOPBP1-207ENST00000509162 WASHC2CQ9Y4E1 1318 aa11.05□□□□□ -0.64
TOPBP1-207ENST00000509162 PLA2R1Q13018 1463 aa11.04□□□□□ -0.64
TOPBP1-207ENST00000509162 NLRP1Q9C000 1473 aa11.04□□□□□ -0.64
TOPBP1-207ENST00000509162 POLR1AO95602 1720 aaPredicted RBP11.04□□□□□ -0.64
TOPBP1-207ENST00000509162 CFAP65Q6ZU64 1925 aaKnown RBP11.03□□□□□ -0.64
TOPBP1-207ENST00000509162 ADGRB3O60242 1522 aa11.03□□□□□ -0.64
TOPBP1-207ENST00000509162 RPRD2Q5VT52 1461 aaKnown RBP11.02□□□□□ -0.65
TOPBP1-207ENST00000509162 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.65
TOPBP1-207ENST00000509162 SPHKAPQ2M3C7 1700 aa11.01□□□□□ -0.65
TOPBP1-207ENST00000509162 ARHGAP23Q9P227 1491 aa11.01□□□□□ -0.65
TOPBP1-207ENST00000509162 CLTCL1P53675 1640 aa11.01□□□□□ -0.65
TOPBP1-207ENST00000509162 CHADLQ6NUI6 762 aa11□□□□□ -0.65
TOPBP1-207ENST00000509162 ESF1Q9H501 851 aaKnown RBP11□□□□□ -0.65
TOPBP1-207ENST00000509162 SLIT1O75093 1534 aa10.99□□□□□ -0.65
TOPBP1-207ENST00000509162 TMEM131LA2VDJ0 1609 aa10.99□□□□□ -0.65
TOPBP1-207ENST00000509162 KDM5AP29375 1690 aaKnown RBP10.99□□□□□ -0.65
TOPBP1-207ENST00000509162 TRPM2O94759 1503 aa10.99□□□□□ -0.65
TOPBP1-207ENST00000509162 NUP155O75694 1391 aa10.98□□□□□ -0.65
TOPBP1-207ENST00000509162 KANK1Q14678 1352 aa10.98□□□□□ -0.65
TOPBP1-207ENST00000509162 PTPRTO14522 1441 aa10.98□□□□□ -0.65
TOPBP1-207ENST00000509162 LTBP4Q8N2S1 1624 aa10.98□□□□□ -0.65
TOPBP1-207ENST00000509162 STRCP1A6NGW2 1772 aa10.96□□□□□ -0.65
TOPBP1-207ENST00000509162 ZFYVE9O95405 1425 aa10.96□□□□□ -0.65
TOPBP1-207ENST00000509162 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.65
TOPBP1-207ENST00000509162 LHX8Q68G74 356 aa10.96□□□□□ -0.65
TOPBP1-207ENST00000509162 PROM2Q8N271 834 aa10.96□□□□□ -0.65
TOPBP1-207ENST00000509162 IQGAP1P46940 1657 aa10.95□□□□□ -0.66
TOPBP1-207ENST00000509162 MED14O60244 1454 aa10.95□□□□□ -0.66
TOPBP1-207ENST00000509162 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
TOPBP1-207ENST00000509162 RAB3GAP2Q9H2M9 1393 aa10.94□□□□□ -0.66
TOPBP1-207ENST00000509162 SCAF11Q99590 1463 aaKnown RBP10.93□□□□□ -0.66
TOPBP1-207ENST00000509162 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
TOPBP1-207ENST00000509162 NRXN3Q9Y4C0 1643 aa10.92□□□□□ -0.66
TOPBP1-207ENST00000509162 EVX2Q03828 476 aa10.92□□□□□ -0.66
TOPBP1-207ENST00000509162 IDI1Q13907 227 aa10.92□□□□□ -0.66
TOPBP1-207ENST00000509162 TMEM2Q9UHN6 1383 aa10.91□□□□□ -0.66
TOPBP1-207ENST00000509162 NEXMIFQ5QGS0 1516 aa10.91□□□□□ -0.66
TOPBP1-207ENST00000509162 FARP1Q9Y4F1 1045 aaPredicted RBP10.91□□□□□ -0.66
TOPBP1-207ENST00000509162 NPHP4O75161 1426 aaPredicted RBP10.91□□□□□ -0.66
TOPBP1-207ENST00000509162 LTKP29376 864 aa10.9□□□□□ -0.66
TOPBP1-207ENST00000509162 ALKQ9UM73 1620 aa10.89□□□□□ -0.67
TOPBP1-207ENST00000509162 SETD1AO15047 1707 aaKnown RBP10.88□□□□□ -0.67
TOPBP1-207ENST00000509162 NWD1Q149M9 1564 aa10.88□□□□□ -0.67
TOPBP1-207ENST00000509162 CREBZFQ9NS37 354 aa10.88□□□□□ -0.67
TOPBP1-207ENST00000509162 IFT172Q9UG01 1749 aa10.88□□□□□ -0.67
TOPBP1-207ENST00000509162 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
TOPBP1-207ENST00000509162 ZNF335Q9H4Z2 1342 aaPredicted RBP10.87□□□□□ -0.67
TOPBP1-207ENST00000509162 RIMS2Q9UQ26 1411 aa10.87□□□□□ -0.67
TOPBP1-207ENST00000509162 ADAMTS13Q76LX8 1427 aa10.86□□□□□ -0.67
TOPBP1-207ENST00000509162 PKD2Q13563 968 aa10.86□□□□□ -0.67
TOPBP1-207ENST00000509162 XIRP1Q702N8 1843 aaKnown RBP10.86□□□□□ -0.67
TOPBP1-207ENST00000509162 PPLO60437 1756 aa10.85□□□□□ -0.67
TOPBP1-207ENST00000509162 SPATA31E1Q6ZUB1 1445 aa10.85□□□□□ -0.67
TOPBP1-207ENST00000509162 SETBP1Q9Y6X0 1596 aa10.85□□□□□ -0.67
TOPBP1-207ENST00000509162 KIF1BO60333 1816 aa10.84□□□□□ -0.67
TOPBP1-207ENST00000509162 ASXL1Q8IXJ9 1541 aa10.84□□□□□ -0.67
TOPBP1-207ENST00000509162 PLEKHG1Q9ULL1 1385 aa10.82□□□□□ -0.68
TOPBP1-207ENST00000509162 XRN1Q8IZH2 1706 aaKnown RBP10.82□□□□□ -0.68
TOPBP1-207ENST00000509162 THEMISQ8N1K5 641 aaPredicted RBP10.82□□□□□ -0.68
TOPBP1-207ENST00000509162 TRIM52Q96A61 297 aa10.82□□□□□ -0.68
TOPBP1-207ENST00000509162 MPHOSPH9Q99550 1183 aa10.82□□□□□ -0.68
TOPBP1-207ENST00000509162 SLC52A1Q9NWF4 448 aa10.82□□□□□ -0.68
TOPBP1-207ENST00000509162 LRRC7Q96NW7 1537 aa10.81□□□□□ -0.68
TOPBP1-207ENST00000509162 PTPRUQ92729 1446 aa10.81□□□□□ -0.68
TOPBP1-207ENST00000509162 DIP2AQ14689 1571 aa10.81□□□□□ -0.68
TOPBP1-207ENST00000509162 ANKLE2Q86XL3 938 aa10.8□□□□□ -0.68
TOPBP1-207ENST00000509162 CPS1P31327 1500 aa10.79□□□□□ -0.68
TOPBP1-207ENST00000509162 ANKRD30BQ9BXX2 1392 aa10.79□□□□□ -0.68
TOPBP1-207ENST00000509162 CD44P16070 742 aaKnown RBP10.79□□□□□ -0.68
TOPBP1-207ENST00000509162 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
TOPBP1-207ENST00000509162 TXNDC2Q86VQ3 553 aa10.79□□□□□ -0.68
TOPBP1-207ENST00000509162 IQSEC2Q5JU85 1478 aa10.79□□□□□ -0.68
TOPBP1-207ENST00000509162 CHD2O14647 1828 aaKnown RBP10.78□□□□□ -0.68
TOPBP1-207ENST00000509162 CCDC144AA2RUR9 1427 aa10.77□□□□□ -0.68
TOPBP1-207ENST00000509162 NRXN1Q9ULB1 1477 aa10.77□□□□□ -0.69
TOPBP1-207ENST00000509162 CERKQ8TCT0 537 aa10.77□□□□□ -0.69
TOPBP1-207ENST00000509162 VASPP50552 380 aaPredicted RBP10.76□□□□□ -0.69
TOPBP1-207ENST00000509162 NKTRP30414 1462 aaKnown RBP10.75□□□□□ -0.69
TOPBP1-207ENST00000509162 CHGAP10645 457 aaKnown RBP10.75□□□□□ -0.69
TOPBP1-207ENST00000509162 ILDR1Q86SU0 546 aaPredicted RBP10.75□□□□□ -0.69
TOPBP1-207ENST00000509162 SLC26A8Q96RN1 970 aa10.75□□□□□ -0.69
TOPBP1-207ENST00000509162 METP08581 1390 aa10.75□□□□□ -0.69
TOPBP1-207ENST00000509162 DHX57Q6P158 1386 aaKnown RBP10.75□□□□□ -0.69
TOPBP1-207ENST00000509162 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms