RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 GTPBP4Q9BZE4 634 aaKnown RBP12.69□□□□□ -0.38
PDGFRA-207ENST00000509092 PARD3Q8TEW0 1356 aa12.69□□□□□ -0.38
PDGFRA-207ENST00000509092 TCOF1Q13428 1488 aaKnown RBP12.68□□□□□ -0.38
PDGFRA-207ENST00000509092 LRRIQ1Q96JM4 1722 aa12.67□□□□□ -0.38
PDGFRA-207ENST00000509092 FOXD1Q16676 465 aa12.67□□□□□ -0.38
PDGFRA-207ENST00000509092 HS1BP3Q53T59 392 aa12.67□□□□□ -0.38
PDGFRA-207ENST00000509092 ZNF326Q5BKZ1 582 aaKnown RBP12.67□□□□□ -0.38
PDGFRA-207ENST00000509092 ZMYM3Q14202 1370 aa12.67□□□□□ -0.38
PDGFRA-207ENST00000509092 SCAPERQ9BY12 1400 aa12.67□□□□□ -0.38
PDGFRA-207ENST00000509092 ZNF500O60304 480 aaPredicted RBP12.67□□□□□ -0.38
PDGFRA-207ENST00000509092 TMEM51Q9NW97 253 aa12.66□□□□□ -0.38
PDGFRA-207ENST00000509092 LETM1O95202 739 aaPredicted RBP12.66□□□□□ -0.38
PDGFRA-207ENST00000509092 SKOR2Q2VWA4 1001 aaPredicted RBP12.66□□□□□ -0.38
PDGFRA-207ENST00000509092 ANP32BQ92688 251 aaKnown RBP12.66□□□□□ -0.38
PDGFRA-207ENST00000509092 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
PDGFRA-207ENST00000509092 UGGT2Q9NYU1 1516 aa12.65□□□□□ -0.38
PDGFRA-207ENST00000509092 PTMSP20962 102 aa12.65□□□□□ -0.38
PDGFRA-207ENST00000509092 SAMD9Q5K651 1589 aa12.65□□□□□ -0.39
PDGFRA-207ENST00000509092 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
PDGFRA-207ENST00000509092 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
PDGFRA-207ENST00000509092 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
PDGFRA-207ENST00000509092 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
PDGFRA-207ENST00000509092 ARID3AQ99856 593 aa12.64□□□□□ -0.39
PDGFRA-207ENST00000509092 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
PDGFRA-207ENST00000509092 ARHGEF11O15085 1522 aa12.63□□□□□ -0.39
PDGFRA-207ENST00000509092 CLASP1Q7Z460 1538 aa12.63□□□□□ -0.39
PDGFRA-207ENST00000509092 TAF3Q5VWG9 929 aa12.62□□□□□ -0.39
PDGFRA-207ENST00000509092 SASS6Q6UVJ0 657 aa12.62□□□□□ -0.39
PDGFRA-207ENST00000509092 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
PDGFRA-207ENST00000509092 NOL7Q9UMY1 257 aaKnown RBP12.62□□□□□ -0.39
PDGFRA-207ENST00000509092 RALGAPBQ86X10 1494 aa12.62□□□□□ -0.39
PDGFRA-207ENST00000509092 IGHDP01880 384 aa12.62□□□□□ -0.39
PDGFRA-207ENST00000509092 RSPH4AQ5TD94 716 aa12.62□□□□□ -0.39
PDGFRA-207ENST00000509092 DUSP27Q5VZP5 1158 aa12.62□□□□□ -0.39
PDGFRA-207ENST00000509092 NCOA3Q9Y6Q9 1424 aa12.62□□□□□ -0.39
PDGFRA-207ENST00000509092 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
PDGFRA-207ENST00000509092 CHIC2Q9UKJ5 165 aa12.61□□□□□ -0.39
PDGFRA-207ENST00000509092 IBTKQ9P2D0 1353 aaPredicted RBP12.61□□□□□ -0.39
PDGFRA-207ENST00000509092 DISP1Q96F81 1524 aa12.61□□□□□ -0.39
PDGFRA-207ENST00000509092 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
PDGFRA-207ENST00000509092 GBP4Q96PP9 640 aa12.6□□□□□ -0.39
PDGFRA-207ENST00000509092 KIAA0556O60303 1618 aa12.59□□□□□ -0.39
PDGFRA-207ENST00000509092 SHROOM2Q13796 1616 aa12.59□□□□□ -0.39
PDGFRA-207ENST00000509092 DDIT3P35638 169 aa12.59□□□□□ -0.39
PDGFRA-207ENST00000509092 MCM5P33992 734 aa12.58□□□□□ -0.4
PDGFRA-207ENST00000509092 XPCQ01831 940 aaPredicted RBP12.58□□□□□ -0.4
PDGFRA-207ENST00000509092 UHRF1BP1Q6BDS2 1440 aa12.58□□□□□ -0.4
PDGFRA-207ENST00000509092 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.58□□□□□ -0.4
PDGFRA-207ENST00000509092 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
PDGFRA-207ENST00000509092 PRG4Q92954 1404 aaPredicted RBP12.57□□□□□ -0.4
PDGFRA-207ENST00000509092 CGNL1Q0VF96 1302 aa12.57□□□□□ -0.4
PDGFRA-207ENST00000509092 HSCBQ8IWL3 235 aa12.57□□□□□ -0.4
PDGFRA-207ENST00000509092 TNPO1Q92973 898 aaKnown RBP12.57□□□□□ -0.4
PDGFRA-207ENST00000509092 ZNF830Q96NB3 372 aaPredicted RBP12.57□□□□□ -0.4
PDGFRA-207ENST00000509092 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
PDGFRA-207ENST00000509092 CARMIL2Q6F5E8 1435 aa12.56□□□□□ -0.4
PDGFRA-207ENST00000509092 ZKSCAN5Q9Y2L8 839 aa12.56□□□□□ -0.4
PDGFRA-207ENST00000509092 PLEKHH1Q9ULM0 1364 aa12.55□□□□□ -0.4
PDGFRA-207ENST00000509092 ZNF521Q96K83 1311 aa12.55□□□□□ -0.4
PDGFRA-207ENST00000509092 PDLIM2Q96JY6 352 aa12.55□□□□□ -0.4
PDGFRA-207ENST00000509092 EPRSP07814 1512 aaKnown RBP12.55□□□□□ -0.4
PDGFRA-207ENST00000509092 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
PDGFRA-207ENST00000509092 NINLQ9Y2I6 1382 aa12.54□□□□□ -0.4
PDGFRA-207ENST00000509092 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
PDGFRA-207ENST00000509092 ERCC6L2Q5T890 1561 aa12.54□□□□□ -0.4
PDGFRA-207ENST00000509092 RAB3GAP1Q15042 981 aa12.53□□□□□ -0.4
PDGFRA-207ENST00000509092 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
PDGFRA-207ENST00000509092 ROCK1Q13464 1354 aa12.53□□□□□ -0.4
PDGFRA-207ENST00000509092 VGLL3A8MV65 326 aa12.53□□□□□ -0.4
PDGFRA-207ENST00000509092 CBX1P83916 185 aa12.53□□□□□ -0.4
PDGFRA-207ENST00000509092 MYRIPQ8NFW9 859 aa12.53□□□□□ -0.4
PDGFRA-207ENST00000509092 FTSJ3Q8IY81 847 aaKnown RBP12.52□□□□□ -0.4
PDGFRA-207ENST00000509092 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.4
PDGFRA-207ENST00000509092 NKTRP30414 1462 aaKnown RBP12.52□□□□□ -0.41
PDGFRA-207ENST00000509092 SMC5Q8IY18 1101 aa12.52□□□□□ -0.41
PDGFRA-207ENST00000509092 CARD11Q9BXL7 1154 aa12.52□□□□□ -0.41
PDGFRA-207ENST00000509092 ZNF445P59923 1031 aa12.51□□□□□ -0.41
PDGFRA-207ENST00000509092 SLFN5Q08AF3 891 aa12.51□□□□□ -0.41
PDGFRA-207ENST00000509092 PDE3AQ14432 1141 aa12.51□□□□□ -0.41
PDGFRA-207ENST00000509092 PANK3Q9H999 370 aa12.51□□□□□ -0.41
PDGFRA-207ENST00000509092 PZPP20742 1482 aa12.51□□□□□ -0.41
PDGFRA-207ENST00000509092 ST20-MTHFSA0A0A6YYL1 179 aa12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 KLHL40Q2TBA0 621 aa12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 TRMT2AQ8IZ69 625 aaKnown RBP12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 PMFBP1Q8TBY8 1022 aa12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 ARHGEF12Q9NZN5 1544 aa12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 ARHGAP31Q2M1Z3 1444 aa12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 VGFO15240 615 aaPredicted RBP12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 RBM25P49756 843 aaKnown RBP12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 ZNF710Q8N1W2 664 aa12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 SNX21Q969T3 373 aa12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 ANKRD30AQ9BXX3 1397 aa12.5□□□□□ -0.41
PDGFRA-207ENST00000509092 MAGI3Q5TCQ9 1506 aa12.49□□□□□ -0.41
PDGFRA-207ENST00000509092 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
PDGFRA-207ENST00000509092 GOLGA6L22H0YM25 854 aa12.49□□□□□ -0.41
PDGFRA-207ENST00000509092 HSP90AB1P08238 724 aaKnown RBP12.49□□□□□ -0.41
PDGFRA-207ENST00000509092 ATP2B3Q16720 1220 aa12.49□□□□□ -0.41
PDGFRA-207ENST00000509092 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms