RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
SH3D19-208ENST00000508492 KANK4Q5T7N3 995 aaPredicted RBP12.33□□□□□ -0.44
SH3D19-208ENST00000508492 PLEKHH2Q8IVE3 1493 aa12.33□□□□□ -0.44
SH3D19-208ENST00000508492 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
SH3D19-208ENST00000508492 SOX12O15370 315 aa12.32□□□□□ -0.44
SH3D19-208ENST00000508492 CEBPAP49715 358 aaPredicted RBP12.31□□□□□ -0.44
SH3D19-208ENST00000508492 NLRP6P59044 892 aa12.31□□□□□ -0.44
SH3D19-208ENST00000508492 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
SH3D19-208ENST00000508492 SPAG9O60271 1321 aaKnown RBP12.31□□□□□ -0.44
SH3D19-208ENST00000508492 MAP3K1Q13233 1512 aa12.31□□□□□ -0.44
SH3D19-208ENST00000508492 MROH2AA6NES4 1674 aa12.3□□□□□ -0.44
SH3D19-208ENST00000508492 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
SH3D19-208ENST00000508492 A2MP01023 1474 aa12.29□□□□□ -0.44
SH3D19-208ENST00000508492 POTEIP0CG38 1075 aa12.29□□□□□ -0.44
SH3D19-208ENST00000508492 EFCAB3Q8N7B9 438 aa12.29□□□□□ -0.44
SH3D19-208ENST00000508492 ARHGEF5Q12774 1597 aa12.29□□□□□ -0.44
SH3D19-208ENST00000508492 CROCC2H7BZ55 1655 aa12.29□□□□□ -0.44
SH3D19-208ENST00000508492 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
SH3D19-208ENST00000508492 HSPA2P54652 639 aa12.28□□□□□ -0.44
SH3D19-208ENST00000508492 STRCQ7RTU9 1775 aa12.28□□□□□ -0.44
SH3D19-208ENST00000508492 CCDC141Q6ZP82 1450 aa12.27□□□□□ -0.44
SH3D19-208ENST00000508492 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
SH3D19-208ENST00000508492 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
SH3D19-208ENST00000508492 CADPS2Q86UW7 1296 aa12.25□□□□□ -0.45
SH3D19-208ENST00000508492 PTPN23Q9H3S7 1636 aa12.25□□□□□ -0.45
SH3D19-208ENST00000508492 MYOM3Q5VTT5 1437 aa12.24□□□□□ -0.45
SH3D19-208ENST00000508492 MAST1Q9Y2H9 1570 aa12.24□□□□□ -0.45
SH3D19-208ENST00000508492 CFAP65Q6ZU64 1925 aaKnown RBP12.23□□□□□ -0.45
SH3D19-208ENST00000508492 CEP152O94986 1710 aa12.23□□□□□ -0.45
SH3D19-208ENST00000508492 MYO3AQ8NEV4 1616 aa12.22□□□□□ -0.45
SH3D19-208ENST00000508492 PHF8Q9UPP1 1060 aa12.22□□□□□ -0.45
SH3D19-208ENST00000508492 RTEL1-TNFRSF6BF6WH68 1400 aa12.21□□□□□ -0.45
SH3D19-208ENST00000508492 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
SH3D19-208ENST00000508492 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
SH3D19-208ENST00000508492 ZNF142P52746 1687 aaPredicted RBP12.2□□□□□ -0.46
SH3D19-208ENST00000508492 DNMT1P26358 1616 aaKnown RBP12.19□□□□□ -0.46
SH3D19-208ENST00000508492 MROH1Q8NDA8 1641 aa12.19□□□□□ -0.46
SH3D19-208ENST00000508492 RNF17Q9BXT8 1623 aaKnown RBP12.19□□□□□ -0.46
SH3D19-208ENST00000508492 GGT6Q6P531 493 aa12.19□□□□□ -0.46
SH3D19-208ENST00000508492 CNTLNQ9NXG0 1405 aa12.19□□□□□ -0.46
SH3D19-208ENST00000508492 PPP1R37O75864 691 aa12.18□□□□□ -0.46
SH3D19-208ENST00000508492 TMEM106CQ9BVX2 250 aa12.18□□□□□ -0.46
SH3D19-208ENST00000508492 UHRF1BP1Q6BDS2 1440 aa12.18□□□□□ -0.46
SH3D19-208ENST00000508492 MIA2Q96PC5 1412 aa12.18□□□□□ -0.46
SH3D19-208ENST00000508492 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
SH3D19-208ENST00000508492 EIF2AK4Q9P2K8 1649 aaKnown RBP12.17□□□□□ -0.46
SH3D19-208ENST00000508492 ZMYM3Q14202 1370 aa12.17□□□□□ -0.46
SH3D19-208ENST00000508492 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
SH3D19-208ENST00000508492 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
SH3D19-208ENST00000508492 ESF1Q9H501 851 aaKnown RBP12.16□□□□□ -0.46
SH3D19-208ENST00000508492 FGD6Q6ZV73 1430 aa12.16□□□□□ -0.46
SH3D19-208ENST00000508492 KDM5DQ9BY66 1539 aa12.16□□□□□ -0.46
SH3D19-208ENST00000508492 TCOF1Q13428 1488 aaKnown RBP12.15□□□□□ -0.46
SH3D19-208ENST00000508492 CEP170BQ9Y4F5 1589 aaPredicted RBP12.15□□□□□ -0.46
SH3D19-208ENST00000508492 ABCC5O15440 1437 aa12.15□□□□□ -0.46
SH3D19-208ENST00000508492 PTPRKQ15262 1439 aa12.15□□□□□ -0.46
SH3D19-208ENST00000508492 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
SH3D19-208ENST00000508492 CAMSAP1Q5T5Y3 1602 aa12.15□□□□□ -0.47
SH3D19-208ENST00000508492 ZC3H13Q5T200 1668 aaKnown RBP12.14□□□□□ -0.47
SH3D19-208ENST00000508492 KIF3BO15066 747 aa12.14□□□□□ -0.47
SH3D19-208ENST00000508492 DAPK1P53355 1430 aa12.13□□□□□ -0.47
SH3D19-208ENST00000508492 NPATQ14207 1427 aa12.12□□□□□ -0.47
SH3D19-208ENST00000508492 ABCC3O15438 1527 aa12.12□□□□□ -0.47
SH3D19-208ENST00000508492 POLR1AO95602 1720 aaPredicted RBP12.12□□□□□ -0.47
SH3D19-208ENST00000508492 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
SH3D19-208ENST00000508492 SHANK2Q9UPX8 1470 aa12.12□□□□□ -0.47
SH3D19-208ENST00000508492 DUOX2Q9NRD8 1548 aa12.11□□□□□ -0.47
SH3D19-208ENST00000508492 DEPDC5O75140 1603 aa12.11□□□□□ -0.47
SH3D19-208ENST00000508492 TSPY4P0CV99 314 aa12.11□□□□□ -0.47
SH3D19-208ENST00000508492 TSPY10P0CW01 314 aa12.11□□□□□ -0.47
SH3D19-208ENST00000508492 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
SH3D19-208ENST00000508492 TIE1P35590 1138 aa12.1□□□□□ -0.47
SH3D19-208ENST00000508492 NCOA1Q15788 1441 aa12.1□□□□□ -0.47
SH3D19-208ENST00000508492 PZPP20742 1482 aa12.09□□□□□ -0.47
SH3D19-208ENST00000508492 FBXO31Q5XUX0 539 aaPredicted RBP12.09□□□□□ -0.47
SH3D19-208ENST00000508492 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
SH3D19-208ENST00000508492 MS4A4AQ96JQ5 239 aa12.09□□□□□ -0.47
SH3D19-208ENST00000508492 PRDM15P57071 1507 aaPredicted RBP12.09□□□□□ -0.47
SH3D19-208ENST00000508492 FAM135AQ9P2D6 1515 aa12.09□□□□□ -0.47
SH3D19-208ENST00000508492 KIF15Q9NS87 1388 aa12.08□□□□□ -0.48
SH3D19-208ENST00000508492 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
SH3D19-208ENST00000508492 E2F4Q16254 413 aa12.08□□□□□ -0.48
SH3D19-208ENST00000508492 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
SH3D19-208ENST00000508492 RRP7BPQ9NSQ0 103 aa12.06□□□□□ -0.48
SH3D19-208ENST00000508492 CHIC2Q9UKJ5 165 aa12.06□□□□□ -0.48
SH3D19-208ENST00000508492 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
SH3D19-208ENST00000508492 SPATA31D1Q6ZQQ2 1576 aa12.05□□□□□ -0.48
SH3D19-208ENST00000508492 NEURL4Q96JN8 1562 aa12.05□□□□□ -0.48
SH3D19-208ENST00000508492 PDE4AP27815 886 aa12.05□□□□□ -0.48
SH3D19-208ENST00000508492 A2ML1A8K2U0 1454 aa12.05□□□□□ -0.48
SH3D19-208ENST00000508492 UBR1Q8IWV7 1749 aa12.05□□□□□ -0.48
SH3D19-208ENST00000508492 WASHC2CQ9Y4E1 1318 aa12.05□□□□□ -0.48
SH3D19-208ENST00000508492 TNRQ92752 1358 aa12.05□□□□□ -0.48
SH3D19-208ENST00000508492 ERBINQ96RT1 1412 aa12.04□□□□□ -0.48
SH3D19-208ENST00000508492 TTLL13PA6NNM8 815 aa12.04□□□□□ -0.48
SH3D19-208ENST00000508492 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
SH3D19-208ENST00000508492 FAM50AQ14320 339 aaKnown RBP12.04□□□□□ -0.48
SH3D19-208ENST00000508492 NCKAP5LQ9HCH0 1330 aa12.04□□□□□ -0.48
SH3D19-208ENST00000508492 MYO5BQ9ULV0 1848 aa12.04□□□□□ -0.48
SH3D19-208ENST00000508492 LTBP4Q8N2S1 1624 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms