RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 TMUB1Q9BVT8 246 aa12.99□□□□□ -0.33
TRAPPC13-209ENST00000508304 TMEM134Q9H6X4 195 aa12.99□□□□□ -0.33
TRAPPC13-209ENST00000508304 PCDHB3Q9Y5E6 796 aa12.99□□□□□ -0.33
TRAPPC13-209ENST00000508304 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
TRAPPC13-209ENST00000508304 BLOC1S3Q6QNY0 202 aa12.95□□□□□ -0.34
TRAPPC13-209ENST00000508304 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
TRAPPC13-209ENST00000508304 FAM161AQ3B820 660 aa12.93□□□□□ -0.34
TRAPPC13-209ENST00000508304 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
TRAPPC13-209ENST00000508304 ACTN4O43707 911 aaKnown RBP12.91□□□□□ -0.34
TRAPPC13-209ENST00000508304 PDZRN3Q9UPQ7 1066 aa12.91□□□□□ -0.34
TRAPPC13-209ENST00000508304 SEMA3EO15041 775 aa12.9□□□□□ -0.34
TRAPPC13-209ENST00000508304 FCHSD2O94868 740 aa12.9□□□□□ -0.34
TRAPPC13-209ENST00000508304 RNF223E7ERA6 249 aa12.89□□□□□ -0.35
TRAPPC13-209ENST00000508304 TLL1O43897 1013 aa12.89□□□□□ -0.35
TRAPPC13-209ENST00000508304 KMT5BQ4FZB7 885 aa12.89□□□□□ -0.35
TRAPPC13-209ENST00000508304 CFHP08603 1231 aa12.88□□□□□ -0.35
TRAPPC13-209ENST00000508304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
TRAPPC13-209ENST00000508304 SLC10A3P09131 477 aa12.87□□□□□ -0.35
TRAPPC13-209ENST00000508304 EMID1Q96A84 441 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC13-209ENST00000508304 PXYLP1Q8TE99 480 aa12.84□□□□□ -0.35
TRAPPC13-209ENST00000508304 SLC19A1P41440 591 aa12.83□□□□□ -0.36
TRAPPC13-209ENST00000508304 TRIM67Q6ZTA4 783 aa12.83□□□□□ -0.36
TRAPPC13-209ENST00000508304 OATP04181 439 aa12.82□□□□□ -0.36
TRAPPC13-209ENST00000508304 ANKLE1Q8NAG6 615 aa12.82□□□□□ -0.36
TRAPPC13-209ENST00000508304 S1PR4O95977 384 aa12.81□□□□□ -0.36
TRAPPC13-209ENST00000508304 HIC1Q14526 733 aa12.81□□□□□ -0.36
TRAPPC13-209ENST00000508304 PPEF1O14829 653 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC13-209ENST00000508304 ADH1BP00325 375 aa12.79□□□□□ -0.36
TRAPPC13-209ENST00000508304 SPRYD7Q5W111 196 aa12.79□□□□□ -0.36
TRAPPC13-209ENST00000508304 METTL3Q86U44 580 aaKnown RBP12.79□□□□□ -0.36
TRAPPC13-209ENST00000508304 TESPA1A2RU30 521 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC13-209ENST00000508304 NR1I2O75469 434 aa12.78□□□□□ -0.36
TRAPPC13-209ENST00000508304 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
TRAPPC13-209ENST00000508304 ZNF598Q86UK7 904 aaKnown RBP12.76□□□□□ -0.37
TRAPPC13-209ENST00000508304 LIAT1Q6ZQX7 453 aa12.75□□□□□ -0.37
TRAPPC13-209ENST00000508304 PRR20EP86478 221 aa12.74□□□□□ -0.37
TRAPPC13-209ENST00000508304 PRR20CP86479 221 aa12.74□□□□□ -0.37
TRAPPC13-209ENST00000508304 PRR20DP86480 221 aa12.74□□□□□ -0.37
TRAPPC13-209ENST00000508304 PRR20BP86481 221 aa12.74□□□□□ -0.37
TRAPPC13-209ENST00000508304 PRR20AP86496 221 aa12.74□□□□□ -0.37
TRAPPC13-209ENST00000508304 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
TRAPPC13-209ENST00000508304 GPR37O15354 613 aa12.72□□□□□ -0.37
TRAPPC13-209ENST00000508304 FECHP22830 423 aa12.72□□□□□ -0.37
TRAPPC13-209ENST00000508304 ZNF787Q6DD87 383 aa12.72□□□□□ -0.37
TRAPPC13-209ENST00000508304 SLC6A16Q9GZN6 736 aa12.72□□□□□ -0.37
TRAPPC13-209ENST00000508304 GNPATO15228 680 aa12.71□□□□□ -0.37
TRAPPC13-209ENST00000508304 RSPH4AQ5TD94 716 aa12.71□□□□□ -0.37
TRAPPC13-209ENST00000508304 SMYD5Q6GMV2 418 aa12.71□□□□□ -0.37
TRAPPC13-209ENST00000508304 PUS10Q3MIT2 529 aaKnown RBP12.7□□□□□ -0.38
TRAPPC13-209ENST00000508304 PLA2G2CQ5R387 149 aa12.7□□□□□ -0.38
TRAPPC13-209ENST00000508304 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
TRAPPC13-209ENST00000508304 GDF9O60383 454 aa12.68□□□□□ -0.38
TRAPPC13-209ENST00000508304 DGAT1O75907 488 aa12.68□□□□□ -0.38
TRAPPC13-209ENST00000508304 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC13-209ENST00000508304 PKDCCQ504Y2 493 aa12.67□□□□□ -0.38
TRAPPC13-209ENST00000508304 SPSB2Q99619 263 aa12.67□□□□□ -0.38
TRAPPC13-209ENST00000508304 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
TRAPPC13-209ENST00000508304 MYT1Q01538 1121 aa12.66□□□□□ -0.38
TRAPPC13-209ENST00000508304 MORN1Q5T089 497 aa12.64□□□□□ -0.39
TRAPPC13-209ENST00000508304 RDH13Q8NBN7 331 aa12.63□□□□□ -0.39
TRAPPC13-209ENST00000508304 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
TRAPPC13-209ENST00000508304 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
TRAPPC13-209ENST00000508304 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
TRAPPC13-209ENST00000508304 FUT2Q10981 343 aa12.61□□□□□ -0.39
TRAPPC13-209ENST00000508304 NLRP7Q8WX94 980 aa12.61□□□□□ -0.39
TRAPPC13-209ENST00000508304 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
TRAPPC13-209ENST00000508304 FAM187AA6NFU0 413 aa12.59□□□□□ -0.39
TRAPPC13-209ENST00000508304 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
TRAPPC13-209ENST00000508304 ZNF775Q96BV0 537 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC13-209ENST00000508304 GCGRP47871 477 aa12.58□□□□□ -0.4
TRAPPC13-209ENST00000508304 PKD2L1Q9P0L9 805 aa12.58□□□□□ -0.4
TRAPPC13-209ENST00000508304 SLC27A5Q9Y2P5 690 aa12.57□□□□□ -0.4
TRAPPC13-209ENST00000508304 RPIAP49247 311 aa12.56□□□□□ -0.4
TRAPPC13-209ENST00000508304 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
TRAPPC13-209ENST00000508304 SULF1Q8IWU6 871 aa12.56□□□□□ -0.4
TRAPPC13-209ENST00000508304 FAM160A2Q8N612 972 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC13-209ENST00000508304 SALL2Q9Y467 1007 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC13-209ENST00000508304 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC13-209ENST00000508304 FCF1Q9Y324 198 aaKnown RBP12.54□□□□□ -0.4
TRAPPC13-209ENST00000508304 POTECB2RU33 542 aa12.53□□□□□ -0.4
TRAPPC13-209ENST00000508304 GPIHBP1Q8IV16 184 aa12.53□□□□□ -0.4
TRAPPC13-209ENST00000508304 BRICD5Q6PL45 260 aa12.52□□□□□ -0.41
TRAPPC13-209ENST00000508304 FOXC1Q12948 553 aa12.51□□□□□ -0.41
TRAPPC13-209ENST00000508304 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
TRAPPC13-209ENST00000508304 AAASQ9NRG9 546 aa12.5□□□□□ -0.41
TRAPPC13-209ENST00000508304 ST8SIA5O15466 376 aa12.49□□□□□ -0.41
TRAPPC13-209ENST00000508304 CD2BP2O95400 341 aaKnown RBP12.48□□□□□ -0.41
TRAPPC13-209ENST00000508304 MSS51Q4VC12 460 aa12.48□□□□□ -0.41
TRAPPC13-209ENST00000508304 RNF19BQ6ZMZ0 732 aa12.47□□□□□ -0.41
TRAPPC13-209ENST00000508304 TOR4AQ9NXH8 423 aa12.47□□□□□ -0.41
TRAPPC13-209ENST00000508304 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
TRAPPC13-209ENST00000508304 CRIPAKQ8N1N5 446 aa12.45□□□□□ -0.42
TRAPPC13-209ENST00000508304 AVPP01185 164 aa12.44□□□□□ -0.42
TRAPPC13-209ENST00000508304 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
TRAPPC13-209ENST00000508304 CD46P15529 392 aa12.43□□□□□ -0.42
TRAPPC13-209ENST00000508304 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC13-209ENST00000508304 MAP2K5Q13163 448 aa12.42□□□□□ -0.42
TRAPPC13-209ENST00000508304 CYP4X1Q8N118 509 aa12.41□□□□□ -0.42
TRAPPC13-209ENST00000508304 Q3C1V9 767 aa12.4□□□□□ -0.42
TRAPPC13-209ENST00000508304 ZBTB24O43167 697 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms