RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 TMEM92Q6UXU6 159 aa6.31□□□□□ -1.4
ATP2C1-213ENST00000508297 PHOX2BQ99453 314 aa6.31□□□□□ -1.4
ATP2C1-213ENST00000508297 SSTR3P32745 418 aaPredicted RBP6.3□□□□□ -1.4
ATP2C1-213ENST00000508297 MDM2Q00987 491 aaPredicted RBP6.3□□□□□ -1.4
ATP2C1-213ENST00000508297 PTGDRQ13258 359 aa6.3□□□□□ -1.4
ATP2C1-213ENST00000508297 BEGAINQ9BUH8 593 aa6.3□□□□□ -1.4
ATP2C1-213ENST00000508297 AMOTL2Q9Y2J4 779 aa6.3□□□□□ -1.4
ATP2C1-213ENST00000508297 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.29□□□□□ -1.4
ATP2C1-213ENST00000508297 EIF5BO60841 1220 aaKnown RBP6.29□□□□□ -1.4
ATP2C1-213ENST00000508297 RFC5P40937 340 aa6.29□□□□□ -1.4
ATP2C1-213ENST00000508297 CCDC27Q2M243 656 aa6.29□□□□□ -1.4
ATP2C1-213ENST00000508297 GLMNQ92990 594 aa6.29□□□□□ -1.4
ATP2C1-213ENST00000508297 IVNS1ABPQ9Y6Y0 642 aa6.29□□□□□ -1.4
ATP2C1-213ENST00000508297 PATL2C9JE40 543 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-213ENST00000508297 MYSM1Q5VVJ2 828 aa6.28□□□□□ -1.4
ATP2C1-213ENST00000508297 DDX12PQ92771 950 aa6.28□□□□□ -1.4
ATP2C1-213ENST00000508297 TBC1D12O60347 775 aa6.27□□□□□ -1.41
ATP2C1-213ENST00000508297 RFX1P22670 979 aa6.27□□□□□ -1.41
ATP2C1-213ENST00000508297 CLCN1P35523 988 aa6.27□□□□□ -1.41
ATP2C1-213ENST00000508297 PDE4CQ08493 712 aa6.27□□□□□ -1.41
ATP2C1-213ENST00000508297 MTMR14Q8NCE2 650 aa6.27□□□□□ -1.41
ATP2C1-213ENST00000508297 BANK1Q8NDB2 785 aa6.27□□□□□ -1.41
ATP2C1-213ENST00000508297 GPCPD1Q9NPB8 672 aa6.27□□□□□ -1.41
ATP2C1-213ENST00000508297 ABL2P42684 1182 aa6.26□□□□□ -1.41
ATP2C1-213ENST00000508297 SRPK2P78362 688 aaKnown RBP6.26□□□□□ -1.41
ATP2C1-213ENST00000508297 FOXK1P85037 733 aa6.26□□□□□ -1.41
ATP2C1-213ENST00000508297 PBXIP1Q96AQ6 731 aa6.26□□□□□ -1.41
ATP2C1-213ENST00000508297 IGSF5Q9NSI5 407 aa6.26□□□□□ -1.41
ATP2C1-213ENST00000508297 MAP3K9P80192 1104 aa6.25□□□□□ -1.41
ATP2C1-213ENST00000508297 SND1Q7KZF4 910 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATP2C1-213ENST00000508297 PLPP6Q8IY26 295 aa6.25□□□□□ -1.41
ATP2C1-213ENST00000508297 FAM177A1Q8N128 213 aaPredicted RBP6.25□□□□□ -1.41
ATP2C1-213ENST00000508297 ADAMTS19Q8TE59 1207 aa6.25□□□□□ -1.41
ATP2C1-213ENST00000508297 NLRP7Q8WX94 980 aa6.25□□□□□ -1.41
ATP2C1-213ENST00000508297 KHSRPQ92945 711 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATP2C1-213ENST00000508297 CLK2P49760 499 aaKnown RBP6.24□□□□□ -1.41
ATP2C1-213ENST00000508297 CFAP70Q5T0N1 1121 aa6.24□□□□□ -1.41
ATP2C1-213ENST00000508297 RSPH4AQ5TD94 716 aa6.24□□□□□ -1.41
ATP2C1-213ENST00000508297 STAC3Q96MF2 364 aa6.24□□□□□ -1.41
ATP2C1-213ENST00000508297 CHMP4AQ9BY43 222 aa6.24□□□□□ -1.41
ATP2C1-213ENST00000508297 USTQ9Y2C2 406 aa6.24□□□□□ -1.41
ATP2C1-213ENST00000508297 NUDT7P0C024 238 aa6.23□□□□□ -1.41
ATP2C1-213ENST00000508297 CSB-PGBD3P0DP91 1061 aa6.23□□□□□ -1.41
ATP2C1-213ENST00000508297 FAM217BQ9NTX9 383 aaPredicted RBP6.23□□□□□ -1.41
ATP2C1-213ENST00000508297 TBC1D2BQ9UPU7 963 aa6.23□□□□□ -1.41
ATP2C1-213ENST00000508297 PSDA5PKW4 1024 aaPredicted RBP6.22□□□□□ -1.41
ATP2C1-213ENST00000508297 UPF1Q92900 1129 aaKnown RBP eCLIP6.22□□□□□ -1.41
ATP2C1-213ENST00000508297 CDHR5Q9HBB8 845 aa6.22□□□□□ -1.41
ATP2C1-213ENST00000508297 NPDC1Q9NQX5 325 aaPredicted RBP6.22□□□□□ -1.41
ATP2C1-213ENST00000508297 LIMD1Q9UGP4 676 aa6.22□□□□□ -1.41
ATP2C1-213ENST00000508297 AXIN2Q9Y2T1 843 aa6.22□□□□□ -1.41
ATP2C1-213ENST00000508297 MYT1Q01538 1121 aa6.21□□□□□ -1.42
ATP2C1-213ENST00000508297 HDGFL1Q5TGJ6 251 aa6.21□□□□□ -1.42
ATP2C1-213ENST00000508297 ARHGAP33O14559 1287 aa6.2□□□□□ -1.42
ATP2C1-213ENST00000508297 FAM161AQ3B820 660 aa6.2□□□□□ -1.42
ATP2C1-213ENST00000508297 TMEM259Q4ZIN3 620 aa6.2□□□□□ -1.42
ATP2C1-213ENST00000508297 PPP2R2DQ66LE6 453 aa6.2□□□□□ -1.42
ATP2C1-213ENST00000508297 ADGRD1Q6QNK2 874 aa6.2□□□□□ -1.42
ATP2C1-213ENST00000508297 TMC2Q8TDI7 906 aa6.2□□□□□ -1.42
ATP2C1-213ENST00000508297 TBC1D2Q9BYX2 928 aa6.2□□□□□ -1.42
ATP2C1-213ENST00000508297 LHX6Q9UPM6 363 aa6.2□□□□□ -1.42
ATP2C1-213ENST00000508297 RGS20O76081 388 aa6.19□□□□□ -1.42
ATP2C1-213ENST00000508297 VRTNQ9H8Y1 702 aa6.19□□□□□ -1.42
ATP2C1-213ENST00000508297 KIAA1522Q9P206 1035 aaPredicted RBP6.19□□□□□ -1.42
ATP2C1-213ENST00000508297 TTBK1Q5TCY1 1321 aaPredicted RBP6.19□□□□□ -1.42
ATP2C1-213ENST00000508297 RBM47A0AV96 593 aaKnown RBP6.18□□□□□ -1.42
ATP2C1-213ENST00000508297 TMEM88BA6NKF7 163 aa6.18□□□□□ -1.42
ATP2C1-213ENST00000508297 WWC1Q8IX03 1113 aa6.18□□□□□ -1.42
ATP2C1-213ENST00000508297 C2orf72A6NCS6 295 aa6.17□□□□□ -1.42
ATP2C1-213ENST00000508297 TK2O00142 265 aa6.17□□□□□ -1.42
ATP2C1-213ENST00000508297 SLC34A2O95436 690 aa6.17□□□□□ -1.42
ATP2C1-213ENST00000508297 CDCA8Q53HL2 280 aa6.17□□□□□ -1.42
ATP2C1-213ENST00000508297 PCDHGA4Q9Y5G9 962 aa6.17□□□□□ -1.42
ATP2C1-213ENST00000508297 TXNDC2Q86VQ3 553 aa6.16□□□□□ -1.42
ATP2C1-213ENST00000508297 KCTD12Q96CX2 325 aaKnown RBP6.16□□□□□ -1.42
ATP2C1-213ENST00000508297 KCNH8Q96L42 1107 aa6.16□□□□□ -1.42
ATP2C1-213ENST00000508297 IRX2Q9BZI1 471 aaPredicted RBP6.16□□□□□ -1.42
ATP2C1-213ENST00000508297 PPP1R12CQ9BZL4 782 aa6.16□□□□□ -1.42
ATP2C1-213ENST00000508297 KIF3CO14782 793 aa6.15□□□□□ -1.42
ATP2C1-213ENST00000508297 POTEEQ6S8J3 1075 aa6.15□□□□□ -1.42
ATP2C1-213ENST00000508297 RIC3Q7Z5B4 369 aa6.15□□□□□ -1.42
ATP2C1-213ENST00000508297 METTL3Q86U44 580 aaKnown RBP6.14□□□□□ -1.43
ATP2C1-213ENST00000508297 MRRFQ96E11 262 aaKnown RBP6.14□□□□□ -1.43
ATP2C1-213ENST00000508297 PALM3A6NDB9 673 aaPredicted RBP6.13□□□□□ -1.43
ATP2C1-213ENST00000508297 EVI5O60447 810 aa6.13□□□□□ -1.43
ATP2C1-213ENST00000508297 AP1G2O75843 785 aa6.13□□□□□ -1.43
ATP2C1-213ENST00000508297 LMOD1P29536 600 aaPredicted RBP6.13□□□□□ -1.43
ATP2C1-213ENST00000508297 QPCTQ16769 361 aa6.13□□□□□ -1.43
ATP2C1-213ENST00000508297 CSPP1Q1MSJ5 1256 aa6.13□□□□□ -1.43
ATP2C1-213ENST00000508297 NOM1Q5C9Z4 860 aaKnown RBP6.13□□□□□ -1.43
ATP2C1-213ENST00000508297 GNEQ9Y223 722 aaKnown RBP6.13□□□□□ -1.43
ATP2C1-213ENST00000508297 GPR37L1O60883 481 aa6.12□□□□□ -1.43
ATP2C1-213ENST00000508297 CCDC125Q86Z20 511 aa6.12□□□□□ -1.43
ATP2C1-213ENST00000508297 SPIRE2Q8WWL2 714 aa6.12□□□□□ -1.43
ATP2C1-213ENST00000508297 GJD4Q96KN9 370 aaPredicted RBP6.12□□□□□ -1.43
ATP2C1-213ENST00000508297 SOCS7O14512 581 aa6.11□□□□□ -1.43
ATP2C1-213ENST00000508297 ATG7O95352 703 aa6.11□□□□□ -1.43
ATP2C1-213ENST00000508297 TSR1Q2NL82 804 aaKnown RBP6.11□□□□□ -1.43
ATP2C1-213ENST00000508297 RTL5Q5HYW3 569 aaPredicted RBP6.11□□□□□ -1.43
ATP2C1-213ENST00000508297 PPP4R3BQ5MIZ7 849 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms