RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
GYPB-208ENST00000507009 LRRC9Q6ZRR7 1453 aa9.11□□□□□ -0.95
GYPB-208ENST00000507009 PIP4P2Q8N4L2 257 aa9.11□□□□□ -0.95
GYPB-208ENST00000507009 BCANQ96GW7 911 aa9.11□□□□□ -0.95
GYPB-208ENST00000507009 RRP7BPQ9NSQ0 103 aa9.11□□□□□ -0.95
GYPB-208ENST00000507009 PIK3C2BO00750 1634 aa9.1□□□□□ -0.95
GYPB-208ENST00000507009 RGS17Q9UGC6 210 aaPredicted RBP9.1□□□□□ -0.95
GYPB-208ENST00000507009 DUOX2Q9NRD8 1548 aa9.1□□□□□ -0.95
GYPB-208ENST00000507009 KANK4Q5T7N3 995 aaPredicted RBP9.09□□□□□ -0.95
GYPB-208ENST00000507009 SLC26A8Q96RN1 970 aa9.09□□□□□ -0.95
GYPB-208ENST00000507009 KIF15Q9NS87 1388 aa9.09□□□□□ -0.95
GYPB-208ENST00000507009 MYOM3Q5VTT5 1437 aa9.08□□□□□ -0.96
GYPB-208ENST00000507009 LOC105371045A0A1W2PR82 267 aa9.08□□□□□ -0.96
GYPB-208ENST00000507009 PROSER2Q86WR7 435 aaPredicted RBP9.08□□□□□ -0.96
GYPB-208ENST00000507009 ROBO1Q9Y6N7 1651 aa9.07□□□□□ -0.96
GYPB-208ENST00000507009 VPS8Q8N3P4 1428 aa9.07□□□□□ -0.96
GYPB-208ENST00000507009 SLIT1O75093 1534 aa9.07□□□□□ -0.96
GYPB-208ENST00000507009 POTEAQ6S8J7 498 aa9.07□□□□□ -0.96
GYPB-208ENST00000507009 CHIC2Q9UKJ5 165 aa9.07□□□□□ -0.96
GYPB-208ENST00000507009 TMEM94Q12767 1356 aa9.07□□□□□ -0.96
GYPB-208ENST00000507009 KANK1Q14678 1352 aa9.07□□□□□ -0.96
GYPB-208ENST00000507009 ARHGAP23Q9P227 1491 aa9.07□□□□□ -0.96
GYPB-208ENST00000507009 CROCC2H7BZ55 1655 aa9.07□□□□□ -0.96
GYPB-208ENST00000507009 PRDM15P57071 1507 aaPredicted RBP9.06□□□□□ -0.96
GYPB-208ENST00000507009 SETD1AO15047 1707 aaKnown RBP9.06□□□□□ -0.96
GYPB-208ENST00000507009 EFCAB6Q5THR3 1501 aa9.05□□□□□ -0.96
GYPB-208ENST00000507009 TMEM2Q9UHN6 1383 aa9.05□□□□□ -0.96
GYPB-208ENST00000507009 FXR2P51116 673 aaKnown RBP eCLIP9.05□□□□□ -0.96
GYPB-208ENST00000507009 ZNF692Q9BU19 519 aaPredicted RBP9.05□□□□□ -0.96
GYPB-208ENST00000507009 PTPN23Q9H3S7 1636 aa9.05□□□□□ -0.96
GYPB-208ENST00000507009 IDI1Q13907 227 aa9.04□□□□□ -0.96
GYPB-208ENST00000507009 PHLPP1O60346 1717 aa9.04□□□□□ -0.96
GYPB-208ENST00000507009 ABCC5O15440 1437 aa9.04□□□□□ -0.96
GYPB-208ENST00000507009 ARHGAP31Q2M1Z3 1444 aa9.04□□□□□ -0.96
GYPB-208ENST00000507009 FAM135BQ49AJ0 1406 aa9.04□□□□□ -0.96
GYPB-208ENST00000507009 ERBINQ96RT1 1412 aa9.04□□□□□ -0.96
GYPB-208ENST00000507009 KCNA6P17658 529 aa9.03□□□□□ -0.96
GYPB-208ENST00000507009 MSH6P52701 1360 aa9.02□□□□□ -0.97
GYPB-208ENST00000507009 MAP3K1Q13233 1512 aa9.02□□□□□ -0.97
GYPB-208ENST00000507009 PPP1R15AO75807 674 aaPredicted RBP9.02□□□□□ -0.97
GYPB-208ENST00000507009 CHGAP10645 457 aaKnown RBP9.02□□□□□ -0.97
GYPB-208ENST00000507009 MEX3CQ5U5Q3 659 aaKnown RBP9.02□□□□□ -0.97
GYPB-208ENST00000507009 C14orf37Q86TY3 774 aa9.02□□□□□ -0.97
GYPB-208ENST00000507009 DAPK1P53355 1430 aa9.02□□□□□ -0.97
GYPB-208ENST00000507009 ADGRB3O60242 1522 aa9.01□□□□□ -0.97
GYPB-208ENST00000507009 MYO5BQ9ULV0 1848 aa9.01□□□□□ -0.97
GYPB-208ENST00000507009 SSUH2Q9Y2M2 353 aa9.01□□□□□ -0.97
GYPB-208ENST00000507009 ANKRD30AQ9BXX3 1397 aa9□□□□□ -0.97
GYPB-208ENST00000507009 NUTM2DQ5VT03 806 aaPredicted RBP9□□□□□ -0.97
GYPB-208ENST00000507009 TRIM52Q96A61 297 aa9□□□□□ -0.97
GYPB-208ENST00000507009 SLAIN2Q9P270 581 aa9□□□□□ -0.97
GYPB-208ENST00000507009 CLEC11AQ9Y240 323 aa9□□□□□ -0.97
GYPB-208ENST00000507009 TET3O43151 1660 aa9□□□□□ -0.97
GYPB-208ENST00000507009 FAM50AQ14320 339 aaKnown RBP8.99□□□□□ -0.97
GYPB-208ENST00000507009 KDM5AP29375 1690 aaKnown RBP8.99□□□□□ -0.97
GYPB-208ENST00000507009 GCC2Q8IWJ2 1684 aa8.99□□□□□ -0.97
GYPB-208ENST00000507009 NWD1Q149M9 1564 aa8.99□□□□□ -0.97
GYPB-208ENST00000507009 FGD6Q6ZV73 1430 aa8.98□□□□□ -0.97
GYPB-208ENST00000507009 NKTRP30414 1462 aaKnown RBP8.98□□□□□ -0.97
GYPB-208ENST00000507009 SPDYE1Q8NFV5 336 aaPredicted RBP8.98□□□□□ -0.97
GYPB-208ENST00000507009 JCADQ9P266 1359 aa8.98□□□□□ -0.97
GYPB-208ENST00000507009 LMTK2Q8IWU2 1503 aa8.97□□□□□ -0.97
GYPB-208ENST00000507009 CHD2O14647 1828 aaKnown RBP8.97□□□□□ -0.97
GYPB-208ENST00000507009 NUTM2BA6NNL0 878 aaPredicted RBP8.97□□□□□ -0.97
GYPB-208ENST00000507009 NUTM2EB1AL46 878 aaPredicted RBP8.97□□□□□ -0.97
GYPB-208ENST00000507009 NUTM2AQ8IVF1 878 aaPredicted RBP8.97□□□□□ -0.97
GYPB-208ENST00000507009 SP7Q8TDD2 431 aaPredicted RBP8.97□□□□□ -0.97
GYPB-208ENST00000507009 RIMS2Q9UQ26 1411 aa8.97□□□□□ -0.97
GYPB-208ENST00000507009 NOS1P29475 1434 aa8.96□□□□□ -0.98
GYPB-208ENST00000507009 LRP6O75581 1613 aa8.95□□□□□ -0.98
GYPB-208ENST00000507009 COL16A1Q07092 1604 aaPredicted RBP8.95□□□□□ -0.98
GYPB-208ENST00000507009 HAX1O00165 279 aa8.95□□□□□ -0.98
GYPB-208ENST00000507009 SLC52A1Q9NWF4 448 aa8.95□□□□□ -0.98
GYPB-208ENST00000507009 PLEKHG1Q9ULL1 1385 aa8.95□□□□□ -0.98
GYPB-208ENST00000507009 ATF3P18847 181 aa8.94□□□□□ -0.98
GYPB-208ENST00000507009 HDGFP51858 240 aaKnown RBP8.94□□□□□ -0.98
GYPB-208ENST00000507009 TMEM131LA2VDJ0 1609 aa8.94□□□□□ -0.98
GYPB-208ENST00000507009 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.94□□□□□ -0.98
GYPB-208ENST00000507009 ZFYVE9O95405 1425 aa8.93□□□□□ -0.98
GYPB-208ENST00000507009 ANKRD50Q9ULJ7 1429 aa8.92□□□□□ -0.98
GYPB-208ENST00000507009 SPATA31A6Q5VVP1 1343 aa8.92□□□□□ -0.98
GYPB-208ENST00000507009 PRKAR2AP13861 404 aaKnown RBP8.92□□□□□ -0.98
GYPB-208ENST00000507009 ZNF772Q68DY9 489 aaPredicted RBP8.92□□□□□ -0.98
GYPB-208ENST00000507009 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
GYPB-208ENST00000507009 UPF1Q92900 1129 aaKnown RBP eCLIP8.92□□□□□ -0.98
GYPB-208ENST00000507009 SHPRHQ149N8 1683 aa8.91□□□□□ -0.98
GYPB-208ENST00000507009 RXRBP28702 533 aa8.91□□□□□ -0.98
GYPB-208ENST00000507009 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.91□□□□□ -0.98
GYPB-208ENST00000507009 TBX22Q9Y458 520 aa8.91□□□□□ -0.98
GYPB-208ENST00000507009 ADGRL2O95490 1459 aa8.9□□□□□ -0.98
GYPB-208ENST00000507009 RPRD2Q5VT52 1461 aaKnown RBP8.9□□□□□ -0.98
GYPB-208ENST00000507009 ITGAEP38570 1179 aa8.9□□□□□ -0.98
GYPB-208ENST00000507009 C19orf44Q9H6X5 657 aa8.9□□□□□ -0.98
GYPB-208ENST00000507009 AMOTL2Q9Y2J4 779 aa8.9□□□□□ -0.98
GYPB-208ENST00000507009 E9PCH4 1651 aa8.9□□□□□ -0.98
GYPB-208ENST00000507009 AHDC1Q5TGY3 1603 aaPredicted RBP8.9□□□□□ -0.99
GYPB-208ENST00000507009 ADAMTS13Q76LX8 1427 aa8.89□□□□□ -0.99
GYPB-208ENST00000507009 AFF2P51816 1311 aa8.89□□□□□ -0.99
GYPB-208ENST00000507009 BRINP3Q76B58 766 aa8.89□□□□□ -0.99
GYPB-208ENST00000507009 TRPM2O94759 1503 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms