RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 DDX12PQ92771 950 aa10.17□□□□□ -0.78
SSBP2-206ENST00000506960 C11orf95C9JLR9 678 aaPredicted RBP10.16□□□□□ -0.78
SSBP2-206ENST00000506960 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
SSBP2-206ENST00000506960 TSR1Q2NL82 804 aaKnown RBP10.16□□□□□ -0.78
SSBP2-206ENST00000506960 EMID1Q96A84 441 aaPredicted RBP10.16□□□□□ -0.78
SSBP2-206ENST00000506960 NBR1Q14596 966 aa10.15□□□□□ -0.78
SSBP2-206ENST00000506960 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
SSBP2-206ENST00000506960 DPYSL4O14531 572 aa10.13□□□□□ -0.79
SSBP2-206ENST00000506960 CAMK2BQ13554 666 aa10.13□□□□□ -0.79
SSBP2-206ENST00000506960 PCDHB3Q9Y5E6 796 aa10.12□□□□□ -0.79
SSBP2-206ENST00000506960 CTC1Q2NKJ3 1217 aa10.11□□□□□ -0.79
SSBP2-206ENST00000506960 LIAT1Q6ZQX7 453 aa10.11□□□□□ -0.79
SSBP2-206ENST00000506960 NUDT18Q6ZVK8 323 aa10.1□□□□□ -0.79
SSBP2-206ENST00000506960 FAM198AQ9UFP1 575 aa10.1□□□□□ -0.79
SSBP2-206ENST00000506960 AXIN1O15169 862 aa10.09□□□□□ -0.79
SSBP2-206ENST00000506960 AVPP01185 164 aa10.09□□□□□ -0.79
SSBP2-206ENST00000506960 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
SSBP2-206ENST00000506960 GMPR2Q9P2T1 348 aaKnown RBP10.09□□□□□ -0.79
SSBP2-206ENST00000506960 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
SSBP2-206ENST00000506960 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.06□□□□□ -0.8
SSBP2-206ENST00000506960 SWT1Q5T5J6 900 aaKnown RBP10.05□□□□□ -0.8
SSBP2-206ENST00000506960 SMCPP49901 116 aaPredicted RBP10.04□□□□□ -0.8
SSBP2-206ENST00000506960 C3orf80F5H4A9 247 aa10.03□□□□□ -0.8
SSBP2-206ENST00000506960 TERTO14746 1132 aaKnown RBP10.03□□□□□ -0.8
SSBP2-206ENST00000506960 S1PR4O95977 384 aa10.03□□□□□ -0.8
SSBP2-206ENST00000506960 BLOC1S3Q6QNY0 202 aa10.03□□□□□ -0.8
SSBP2-206ENST00000506960 DACH1Q9UI36 760 aa10.03□□□□□ -0.8
SSBP2-206ENST00000506960 PAXIP1Q6ZW49 1069 aaPredicted RBP10.02□□□□□ -0.81
SSBP2-206ENST00000506960 SPDYE16A6NNV3 312 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-206ENST00000506960 PPEF1O14829 653 aaPredicted RBP10.01□□□□□ -0.81
SSBP2-206ENST00000506960 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
SSBP2-206ENST00000506960 FOXC1Q12948 553 aa10□□□□□ -0.81
SSBP2-206ENST00000506960 SUZ12Q15022 739 aaKnown RBP10□□□□□ -0.81
SSBP2-206ENST00000506960 PDIA6Q15084 440 aa9.99□□□□□ -0.81
SSBP2-206ENST00000506960 PKD2L1Q9P0L9 805 aa9.99□□□□□ -0.81
SSBP2-206ENST00000506960 CYP4X1Q8N118 509 aa9.98□□□□□ -0.81
SSBP2-206ENST00000506960 SENP2Q9HC62 589 aa9.98□□□□□ -0.81
SSBP2-206ENST00000506960 TLL1O43897 1013 aa9.96□□□□□ -0.82
SSBP2-206ENST00000506960 ADH1BP00325 375 aa9.96□□□□□ -0.82
SSBP2-206ENST00000506960 SLC16A10Q8TF71 515 aa9.96□□□□□ -0.82
SSBP2-206ENST00000506960 TOR4AQ9NXH8 423 aa9.96□□□□□ -0.82
SSBP2-206ENST00000506960 KMT5BQ4FZB7 885 aa9.95□□□□□ -0.82
SSBP2-206ENST00000506960 SLC6A16Q9GZN6 736 aa9.95□□□□□ -0.82
SSBP2-206ENST00000506960 CD2BP2O95400 341 aaKnown RBP9.94□□□□□ -0.82
SSBP2-206ENST00000506960 RPIAP49247 311 aa9.94□□□□□ -0.82
SSBP2-206ENST00000506960 NR1I2O75469 434 aa9.93□□□□□ -0.82
SSBP2-206ENST00000506960 ZSCAN1Q8NBB4 408 aa9.93□□□□□ -0.82
SSBP2-206ENST00000506960 ACTN4O43707 911 aaKnown RBP9.92□□□□□ -0.82
SSBP2-206ENST00000506960 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
SSBP2-206ENST00000506960 KIFC2Q96AC6 838 aa9.91□□□□□ -0.82
SSBP2-206ENST00000506960 TRIM47Q96LD4 638 aa9.91□□□□□ -0.82
SSBP2-206ENST00000506960 PLA2G2CQ5R387 149 aa9.89□□□□□ -0.83
SSBP2-206ENST00000506960 LCE2CQ5TA81 110 aa9.89□□□□□ -0.83
SSBP2-206ENST00000506960 ATP13A2Q9NQ11 1180 aa9.89□□□□□ -0.83
SSBP2-206ENST00000506960 SNRPBP14678 240 aaKnown RBP9.87□□□□□ -0.83
SSBP2-206ENST00000506960 EYA1Q99502 592 aa9.87□□□□□ -0.83
SSBP2-206ENST00000506960 TTC24A2A3L6 582 aaPredicted RBP9.86□□□□□ -0.83
SSBP2-206ENST00000506960 GRXCR2A6NFK2 248 aa9.85□□□□□ -0.83
SSBP2-206ENST00000506960 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
SSBP2-206ENST00000506960 PRIM1P49642 420 aaKnown RBP9.83□□□□□ -0.84
SSBP2-206ENST00000506960 NPAS3Q8IXF0 933 aa9.83□□□□□ -0.84
SSBP2-206ENST00000506960 IRF7Q92985 503 aa9.83□□□□□ -0.84
SSBP2-206ENST00000506960 CDHR5Q9HBB8 845 aa9.83□□□□□ -0.84
SSBP2-206ENST00000506960 TSHZ2Q9NRE2 1034 aa9.83□□□□□ -0.84
SSBP2-206ENST00000506960 DNAJB2P25686 324 aa9.82□□□□□ -0.84
SSBP2-206ENST00000506960 OSBPP22059 807 aa9.8□□□□□ -0.84
SSBP2-206ENST00000506960 E2F4Q16254 413 aa9.8□□□□□ -0.84
SSBP2-206ENST00000506960 NXF1Q9UBU9 619 aaKnown RBP9.8□□□□□ -0.84
SSBP2-206ENST00000506960 CFHP08603 1231 aa9.79□□□□□ -0.84
SSBP2-206ENST00000506960 GMPRP36959 345 aa9.79□□□□□ -0.84
SSBP2-206ENST00000506960 SNIP1Q8TAD8 396 aaKnown RBP9.78□□□□□ -0.84
SSBP2-206ENST00000506960 SPSB2Q99619 263 aa9.78□□□□□ -0.84
SSBP2-206ENST00000506960 WDR70Q9NW82 654 aa9.78□□□□□ -0.84
SSBP2-206ENST00000506960 LORP23490 312 aaPredicted RBP9.77□□□□□ -0.85
SSBP2-206ENST00000506960 SCUBE3Q8IX30 993 aa9.77□□□□□ -0.85
SSBP2-206ENST00000506960 TMEM134Q9H6X4 195 aa9.76□□□□□ -0.85
SSBP2-206ENST00000506960 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
SSBP2-206ENST00000506960 NPDC1Q9NQX5 325 aaPredicted RBP9.75□□□□□ -0.85
SSBP2-206ENST00000506960 ZBTB24O43167 697 aaPredicted RBP9.74□□□□□ -0.85
SSBP2-206ENST00000506960 ARIH1Q9Y4X5 557 aaPredicted RBP9.74□□□□□ -0.85
SSBP2-206ENST00000506960 SMPD1P17405 629 aa9.73□□□□□ -0.85
SSBP2-206ENST00000506960 WNT7AO00755 349 aa9.72□□□□□ -0.85
SSBP2-206ENST00000506960 RSPH4AQ5TD94 716 aa9.72□□□□□ -0.85
SSBP2-206ENST00000506960 FCF1Q9Y324 198 aaKnown RBP9.72□□□□□ -0.85
SSBP2-206ENST00000506960 PLCB2Q00722 1185 aa9.71□□□□□ -0.86
SSBP2-206ENST00000506960 KCNMA1Q12791 1236 aa9.71□□□□□ -0.86
SSBP2-206ENST00000506960 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
SSBP2-206ENST00000506960 H3BM21 787 aa9.66□□□□□ -0.86
SSBP2-206ENST00000506960 KCNV2Q8TDN2 545 aa9.66□□□□□ -0.86
SSBP2-206ENST00000506960 REPIN1Q9BWE0 567 aaKnown RBP9.66□□□□□ -0.86
SSBP2-206ENST00000506960 RCCD1A6NED2 376 aa9.63□□□□□ -0.87
SSBP2-206ENST00000506960 SLC10A3P09131 477 aa9.63□□□□□ -0.87
SSBP2-206ENST00000506960 J3QL48 77 aa9.62□□□□□ -0.87
SSBP2-206ENST00000506960 TMEM151AQ8N4L1 468 aa9.62□□□□□ -0.87
SSBP2-206ENST00000506960 HPS1Q92902 700 aa9.61□□□□□ -0.87
SSBP2-206ENST00000506960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.6□□□□□ -0.87
SSBP2-206ENST00000506960 FMNL1O95466 1100 aaPredicted RBP9.6□□□□□ -0.87
SSBP2-206ENST00000506960 PUS10Q3MIT2 529 aaKnown RBP9.6□□□□□ -0.87
SSBP2-206ENST00000506960 ARHGEF1Q92888 912 aaKnown RBP9.6□□□□□ -0.87
SSBP2-206ENST00000506960 MRGPRX2Q96LB1 330 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms