RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PLPP6Q8IY26 295 aa14.88□□□□□ -0.03
CLCN3-205ENST00000506924 ARHGAP5Q13017 1502 aa14.87□□□□□ -0.03
CLCN3-205ENST00000506924 KANK4Q5T7N3 995 aaPredicted RBP14.87□□□□□ -0.03
CLCN3-205ENST00000506924 EFCAB2Q5VUJ9 269 aa14.86□□□□□ -0.03
CLCN3-205ENST00000506924 ZNF777Q9ULD5 760 aaPredicted RBP14.86□□□□□ -0.03
CLCN3-205ENST00000506924 EHBP1L1Q8N3D4 1523 aa14.86□□□□□ -0.03
CLCN3-205ENST00000506924 ARAP3Q8WWN8 1544 aa14.86□□□□□ -0.03
CLCN3-205ENST00000506924 CDC42BPBQ9Y5S2 1711 aa14.86□□□□□ -0.03
CLCN3-205ENST00000506924 CDC42BPAQ5VT25 1732 aa14.85□□□□□ -0.03
CLCN3-205ENST00000506924 CFAP74Q9C0B2 1584 aa14.85□□□□□ -0.03
CLCN3-205ENST00000506924 PHLDB1Q86UU1 1377 aa14.85□□□□□ -0.03
CLCN3-205ENST00000506924 NBR1Q14596 966 aa14.84□□□□□ -0.03
CLCN3-205ENST00000506924 CCNB3Q8WWL7 1395 aa14.84□□□□□ -0.03
CLCN3-205ENST00000506924 ADGRL1O94910 1474 aa14.83□□□□□ -0.03
CLCN3-205ENST00000506924 PREX2Q70Z35 1606 aa14.83□□□□□ -0.04
CLCN3-205ENST00000506924 SCAPERQ9BY12 1400 aa14.83□□□□□ -0.04
CLCN3-205ENST00000506924 LRRC9Q6ZRR7 1453 aa14.82□□□□□ -0.04
CLCN3-205ENST00000506924 GPATCH8Q9UKJ3 1502 aaKnown RBP14.82□□□□□ -0.04
CLCN3-205ENST00000506924 LHX8Q68G74 356 aa14.82□□□□□ -0.04
CLCN3-205ENST00000506924 DENND4BO75064 1496 aaPredicted RBP14.82□□□□□ -0.04
CLCN3-205ENST00000506924 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
CLCN3-205ENST00000506924 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
CLCN3-205ENST00000506924 NCOA2Q15596 1464 aa14.8□□□□□ -0.04
CLCN3-205ENST00000506924 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
CLCN3-205ENST00000506924 SLC34A2O95436 690 aa14.79□□□□□ -0.04
CLCN3-205ENST00000506924 MAP3K1Q13233 1512 aa14.79□□□□□ -0.04
CLCN3-205ENST00000506924 RICTORQ6R327 1708 aa14.79□□□□□ -0.04
CLCN3-205ENST00000506924 AFAP1Q8N556 730 aa14.78□□□□□ -0.04
CLCN3-205ENST00000506924 ZNF644Q9H582 1327 aaPredicted RBP14.77□□□□□ -0.04
CLCN3-205ENST00000506924 ARHGEF12Q9NZN5 1544 aa14.76□□□□□ -0.05
CLCN3-205ENST00000506924 HNRNPMP52272 730 aaKnown RBP eCLIP14.76□□□□□ -0.05
CLCN3-205ENST00000506924 PPARGC1BQ86YN6 1023 aaKnown RBP14.76□□□□□ -0.05
CLCN3-205ENST00000506924 EMILIN3Q9NT22 766 aa14.76□□□□□ -0.05
CLCN3-205ENST00000506924 MYT1LQ9UL68 1186 aa14.76□□□□□ -0.05
CLCN3-205ENST00000506924 SAMD9LQ8IVG5 1584 aa14.76□□□□□ -0.05
CLCN3-205ENST00000506924 POGZQ7Z3K3 1410 aa14.75□□□□□ -0.05
CLCN3-205ENST00000506924 SLAIN1Q8ND83 568 aa14.75□□□□□ -0.05
CLCN3-205ENST00000506924 TRAPPC8Q9Y2L5 1435 aa14.75□□□□□ -0.05
CLCN3-205ENST00000506924 ABCC1P33527 1531 aa14.74□□□□□ -0.05
CLCN3-205ENST00000506924 ITSN2Q9NZM3 1697 aa14.74□□□□□ -0.05
CLCN3-205ENST00000506924 OXER1Q8TDS5 423 aa14.73□□□□□ -0.05
CLCN3-205ENST00000506924 PTCD2Q8WV60 388 aaKnown RBP14.73□□□□□ -0.05
CLCN3-205ENST00000506924 SYCP2Q9BX26 1530 aa14.72□□□□□ -0.05
CLCN3-205ENST00000506924 SPDYE16A6NNV3 312 aaPredicted RBP14.72□□□□□ -0.05
CLCN3-205ENST00000506924 YEATS2Q9ULM3 1422 aa14.72□□□□□ -0.05
CLCN3-205ENST00000506924 ZNF518AQ6AHZ1 1483 aa14.7□□□□□ -0.06
CLCN3-205ENST00000506924 ZMYM4Q5VZL5 1548 aa14.7□□□□□ -0.06
CLCN3-205ENST00000506924 ZFYVE16Q7Z3T8 1539 aa14.7□□□□□ -0.06
CLCN3-205ENST00000506924 ARID4BQ4LE39 1312 aaPredicted RBP14.69□□□□□ -0.06
CLCN3-205ENST00000506924 KDM4FA0A1W2PPD8 638 aa14.69□□□□□ -0.06
CLCN3-205ENST00000506924 TBC1D12O60347 775 aa14.69□□□□□ -0.06
CLCN3-205ENST00000506924 PDIA6Q15084 440 aa14.69□□□□□ -0.06
CLCN3-205ENST00000506924 OTUD5Q96G74 571 aa14.68□□□□□ -0.06
CLCN3-205ENST00000506924 CAMSAP2Q08AD1 1489 aa14.68□□□□□ -0.06
CLCN3-205ENST00000506924 ARHGEF40Q8TER5 1519 aa14.67□□□□□ -0.06
CLCN3-205ENST00000506924 DPYSL4O14531 572 aa14.67□□□□□ -0.06
CLCN3-205ENST00000506924 DOK7Q18PE1 504 aa14.67□□□□□ -0.06
CLCN3-205ENST00000506924 PLEKHH2Q8IVE3 1493 aa14.67□□□□□ -0.06
CLCN3-205ENST00000506924 KDM5CP41229 1560 aa14.67□□□□□ -0.06
CLCN3-205ENST00000506924 MYOM3Q5VTT5 1437 aa14.66□□□□□ -0.06
CLCN3-205ENST00000506924 MAP3K9P80192 1104 aa14.66□□□□□ -0.06
CLCN3-205ENST00000506924 KIAA1107Q9UPP5 1409 aa14.66□□□□□ -0.06
CLCN3-205ENST00000506924 SPAG9O60271 1321 aaKnown RBP14.66□□□□□ -0.06
CLCN3-205ENST00000506924 HECW2Q9P2P5 1572 aa14.65□□□□□ -0.06
CLCN3-205ENST00000506924 MAGI2Q86UL8 1455 aa14.65□□□□□ -0.06
CLCN3-205ENST00000506924 SNPHO15079 494 aa14.65□□□□□ -0.06
CLCN3-205ENST00000506924 ZSWIM6Q9HCJ5 1215 aa14.65□□□□□ -0.06
CLCN3-205ENST00000506924 MBD5Q9P267 1494 aa14.64□□□□□ -0.07
CLCN3-205ENST00000506924 SIGLEC1Q9BZZ2 1709 aa14.64□□□□□ -0.07
CLCN3-205ENST00000506924 MLECQ14165 292 aa14.64□□□□□ -0.07
CLCN3-205ENST00000506924 RIMBP2O15034 1052 aa14.63□□□□□ -0.07
CLCN3-205ENST00000506924 ATP10AO60312 1499 aa14.63□□□□□ -0.07
CLCN3-205ENST00000506924 MLH3Q9UHC1 1453 aa14.63□□□□□ -0.07
CLCN3-205ENST00000506924 KIDINS220Q9ULH0 1771 aa14.62□□□□□ -0.07
CLCN3-205ENST00000506924 ABCA6Q8N139 1617 aa14.62□□□□□ -0.07
CLCN3-205ENST00000506924 DIP2CQ9Y2E4 1556 aa14.61□□□□□ -0.07
CLCN3-205ENST00000506924 MIA2Q96PC5 1412 aa14.61□□□□□ -0.07
CLCN3-205ENST00000506924 TESPA1A2RU30 521 aaPredicted RBP14.61□□□□□ -0.07
CLCN3-205ENST00000506924 TULP1O00294 542 aaPredicted RBP14.61□□□□□ -0.07
CLCN3-205ENST00000506924 UPF1Q92900 1129 aaKnown RBP eCLIP14.61□□□□□ -0.07
CLCN3-205ENST00000506924 C9orf84Q5VXU9 1444 aa14.6□□□□□ -0.07
CLCN3-205ENST00000506924 PTPN23Q9H3S7 1636 aa14.6□□□□□ -0.07
CLCN3-205ENST00000506924 ZNF316A6NFI3 1004 aaPredicted RBP14.6□□□□□ -0.07
CLCN3-205ENST00000506924 HOXB3P14651 431 aaPredicted RBP14.6□□□□□ -0.07
CLCN3-205ENST00000506924 FGD6Q6ZV73 1430 aa14.59□□□□□ -0.07
CLCN3-205ENST00000506924 CCDC141Q6ZP82 1450 aa14.59□□□□□ -0.07
CLCN3-205ENST00000506924 SMYD5Q6GMV2 418 aa14.59□□□□□ -0.07
CLCN3-205ENST00000506924 ATP7AQ04656 1500 aa14.59□□□□□ -0.07
CLCN3-205ENST00000506924 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
CLCN3-205ENST00000506924 PCDHGA4Q9Y5G9 962 aa14.58□□□□□ -0.08
CLCN3-205ENST00000506924 INO80Q9ULG1 1556 aaPredicted RBP14.58□□□□□ -0.08
CLCN3-205ENST00000506924 SEMA3EO15041 775 aa14.57□□□□□ -0.08
CLCN3-205ENST00000506924 TSPY4P0CV99 314 aa14.57□□□□□ -0.08
CLCN3-205ENST00000506924 TSPY10P0CW01 314 aa14.57□□□□□ -0.08
CLCN3-205ENST00000506924 PTGER2P43116 358 aa14.57□□□□□ -0.08
CLCN3-205ENST00000506924 BCORL1Q5H9F3 1711 aa14.57□□□□□ -0.08
CLCN3-205ENST00000506924 RSPH4AQ5TD94 716 aa14.56□□□□□ -0.08
CLCN3-205ENST00000506924 ARHGEF5Q12774 1597 aa14.56□□□□□ -0.08
CLCN3-205ENST00000506924 ANO8Q9HCE9 1232 aaPredicted RBP14.55□□□□□ -0.08
CLCN3-205ENST00000506924 EVI5O60447 810 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms