RNA–Protein interactions for RNA: ENST00000506787.5

UBE2B-205, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-205ENST00000506787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.92■□□□□ 0.3
UBE2B-205ENST00000506787 SYCP2Q9BX26 1530 aa16.92■□□□□ 0.3
UBE2B-205ENST00000506787 TTLL13PA6NNM8 815 aa16.92■□□□□ 0.3
UBE2B-205ENST00000506787 NPHP4O75161 1426 aaPredicted RBP16.92■□□□□ 0.3
UBE2B-205ENST00000506787 CDC42BPAQ5VT25 1732 aa16.92■□□□□ 0.3
UBE2B-205ENST00000506787 SETD1AO15047 1707 aaKnown RBP16.91■□□□□ 0.3
UBE2B-205ENST00000506787 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
UBE2B-205ENST00000506787 TNRQ92752 1358 aa16.9■□□□□ 0.3
UBE2B-205ENST00000506787 SEC24BO95487 1268 aa16.9■□□□□ 0.3
UBE2B-205ENST00000506787 HNRNPMP52272 730 aaKnown RBP eCLIP16.9■□□□□ 0.3
UBE2B-205ENST00000506787 FBXO31Q5XUX0 539 aaPredicted RBP16.9■□□□□ 0.3
UBE2B-205ENST00000506787 SGIP1Q9BQI5 828 aa16.9■□□□□ 0.3
UBE2B-205ENST00000506787 INO80Q9ULG1 1556 aaPredicted RBP16.89■□□□□ 0.3
UBE2B-205ENST00000506787 EEA1Q15075 1411 aa16.89■□□□□ 0.29
UBE2B-205ENST00000506787 ZNF777Q9ULD5 760 aaPredicted RBP16.89■□□□□ 0.29
UBE2B-205ENST00000506787 DEPDC5O75140 1603 aa16.88■□□□□ 0.29
UBE2B-205ENST00000506787 SYNMO15061 1565 aa16.87■□□□□ 0.29
UBE2B-205ENST00000506787 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
UBE2B-205ENST00000506787 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
UBE2B-205ENST00000506787 COLQQ9Y215 455 aaPredicted RBP16.86■□□□□ 0.29
UBE2B-205ENST00000506787 IER5LQ5T953 404 aa16.85■□□□□ 0.29
UBE2B-205ENST00000506787 THEMISQ8N1K5 641 aaPredicted RBP16.85■□□□□ 0.29
UBE2B-205ENST00000506787 ZBTB47Q9UFB7 747 aaPredicted RBP16.84■□□□□ 0.29
UBE2B-205ENST00000506787 PZPP20742 1482 aa16.84■□□□□ 0.29
UBE2B-205ENST00000506787 UGGT1Q9NYU2 1555 aa16.83■□□□□ 0.28
UBE2B-205ENST00000506787 GPATCH8Q9UKJ3 1502 aaKnown RBP16.82■□□□□ 0.28
UBE2B-205ENST00000506787 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
UBE2B-205ENST00000506787 PCDHB13Q9Y5F0 798 aa16.82■□□□□ 0.28
UBE2B-205ENST00000506787 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
UBE2B-205ENST00000506787 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
UBE2B-205ENST00000506787 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
UBE2B-205ENST00000506787 MIA2Q96PC5 1412 aa16.8■□□□□ 0.28
UBE2B-205ENST00000506787 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBE2B-205ENST00000506787 ADGBQ8N7X0 1667 aa16.8■□□□□ 0.28
UBE2B-205ENST00000506787 FAM135BQ49AJ0 1406 aa16.79■□□□□ 0.28
UBE2B-205ENST00000506787 CCDC18Q5T9S5 1454 aa16.78■□□□□ 0.28
UBE2B-205ENST00000506787 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.27
UBE2B-205ENST00000506787 KDM5DQ9BY66 1539 aa16.76■□□□□ 0.27
UBE2B-205ENST00000506787 ZC3H13Q5T200 1668 aaKnown RBP16.76■□□□□ 0.27
UBE2B-205ENST00000506787 PLEKHH2Q8IVE3 1493 aa16.76■□□□□ 0.27
UBE2B-205ENST00000506787 NUBP1P53384 320 aa16.75■□□□□ 0.27
UBE2B-205ENST00000506787 DHX29Q7Z478 1369 aaKnown RBP16.75■□□□□ 0.27
UBE2B-205ENST00000506787 UBTFP17480 764 aaKnown RBP16.74■□□□□ 0.27
UBE2B-205ENST00000506787 CASKIN1Q8WXD9 1431 aa16.73■□□□□ 0.27
UBE2B-205ENST00000506787 KIF3BO15066 747 aa16.72■□□□□ 0.27
UBE2B-205ENST00000506787 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
UBE2B-205ENST00000506787 WASHC2CQ9Y4E1 1318 aa16.7■□□□□ 0.26
UBE2B-205ENST00000506787 IFNL1Q8IU54 200 aa16.7■□□□□ 0.26
UBE2B-205ENST00000506787 ROBO1Q9Y6N7 1651 aa16.69■□□□□ 0.26
UBE2B-205ENST00000506787 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
UBE2B-205ENST00000506787 FAM212AQ96EL1 285 aa16.69■□□□□ 0.26
UBE2B-205ENST00000506787 RTEL1-TNFRSF6BF6WH68 1400 aa16.69■□□□□ 0.26
UBE2B-205ENST00000506787 ZNF644Q9H582 1327 aaPredicted RBP16.68■□□□□ 0.26
UBE2B-205ENST00000506787 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
UBE2B-205ENST00000506787 CCNB3Q8WWL7 1395 aa16.65■□□□□ 0.26
UBE2B-205ENST00000506787 LTKP29376 864 aa16.65■□□□□ 0.26
UBE2B-205ENST00000506787 TRIM52Q96A61 297 aa16.65■□□□□ 0.26
UBE2B-205ENST00000506787 TMEM106CQ9BVX2 250 aa16.65■□□□□ 0.26
UBE2B-205ENST00000506787 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
UBE2B-205ENST00000506787 SLAIN1Q8ND83 568 aa16.63■□□□□ 0.25
UBE2B-205ENST00000506787 JCADQ9P266 1359 aa16.63■□□□□ 0.25
UBE2B-205ENST00000506787 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
UBE2B-205ENST00000506787 MAP3K1Q13233 1512 aa16.62■□□□□ 0.25
UBE2B-205ENST00000506787 CDAN1Q8IWY9 1227 aa16.62■□□□□ 0.25
UBE2B-205ENST00000506787 UBR1Q8IWV7 1749 aa16.62■□□□□ 0.25
UBE2B-205ENST00000506787 FYCO1Q9BQS8 1478 aa16.61■□□□□ 0.25
UBE2B-205ENST00000506787 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
UBE2B-205ENST00000506787 LRP6O75581 1613 aa16.61■□□□□ 0.25
UBE2B-205ENST00000506787 PLCG2P16885 1265 aa16.61■□□□□ 0.25
UBE2B-205ENST00000506787 ERVK-7P63135 1459 aa16.61■□□□□ 0.25
UBE2B-205ENST00000506787 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
UBE2B-205ENST00000506787 SLIT1O75093 1534 aa16.6■□□□□ 0.25
UBE2B-205ENST00000506787 RBM33Q96EV2 1170 aaKnown RBP16.59■□□□□ 0.25
UBE2B-205ENST00000506787 PHLPP1O60346 1717 aa16.59■□□□□ 0.25
UBE2B-205ENST00000506787 ZNF772Q68DY9 489 aaPredicted RBP16.58■□□□□ 0.24
UBE2B-205ENST00000506787 LRRC9Q6ZRR7 1453 aa16.58■□□□□ 0.24
UBE2B-205ENST00000506787 ABCC3O15438 1527 aa16.57■□□□□ 0.24
UBE2B-205ENST00000506787 TIAM1Q13009 1591 aa16.55■□□□□ 0.24
UBE2B-205ENST00000506787 ST18O60284 1047 aa16.55■□□□□ 0.24
UBE2B-205ENST00000506787 IRX5P78411 483 aaPredicted RBP16.55■□□□□ 0.24
UBE2B-205ENST00000506787 COL16A1Q07092 1604 aaPredicted RBP16.55■□□□□ 0.24
UBE2B-205ENST00000506787 KCNA6P17658 529 aa16.54■□□□□ 0.24
UBE2B-205ENST00000506787 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
UBE2B-205ENST00000506787 RXRBP28702 533 aa16.53■□□□□ 0.24
UBE2B-205ENST00000506787 PROSER2Q86WR7 435 aaPredicted RBP16.53■□□□□ 0.24
UBE2B-205ENST00000506787 CDK12Q9NYV4 1490 aaPredicted RBP16.53■□□□□ 0.24
UBE2B-205ENST00000506787 SPATA31A6Q5VVP1 1343 aa16.52■□□□□ 0.24
UBE2B-205ENST00000506787 SLAIN2Q9P270 581 aa16.52■□□□□ 0.24
UBE2B-205ENST00000506787 PRDM15P57071 1507 aaPredicted RBP16.51■□□□□ 0.23
UBE2B-205ENST00000506787 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
UBE2B-205ENST00000506787 EID1Q9Y6B2 187 aa16.5■□□□□ 0.23
UBE2B-205ENST00000506787 FGD6Q6ZV73 1430 aa16.5■□□□□ 0.23
UBE2B-205ENST00000506787 CFAP65Q6ZU64 1925 aaKnown RBP16.5■□□□□ 0.23
UBE2B-205ENST00000506787 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
UBE2B-205ENST00000506787 OCEL1Q9H607 264 aa16.48■□□□□ 0.23
UBE2B-205ENST00000506787 MSH6P52701 1360 aa16.48■□□□□ 0.23
UBE2B-205ENST00000506787 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
UBE2B-205ENST00000506787 EP400Q96L91 3159 aa16.48■□□□□ 0.23
UBE2B-205ENST00000506787 SLC26A8Q96RN1 970 aa16.47■□□□□ 0.23
UBE2B-205ENST00000506787 MROH1Q8NDA8 1641 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms