RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 CHRM1P11229 460 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-207ENST00000506687 PLCH2O75038 1416 aa7.57□□□□□ -1.2
CPNE4-207ENST00000506687 LRRC9Q6ZRR7 1453 aa7.56□□□□□ -1.2
CPNE4-207ENST00000506687 REREQ9P2R6 1566 aa7.56□□□□□ -1.2
CPNE4-207ENST00000506687 E2F4Q16254 413 aa7.56□□□□□ -1.2
CPNE4-207ENST00000506687 ZNF772Q68DY9 489 aaPredicted RBP7.56□□□□□ -1.2
CPNE4-207ENST00000506687 BARGINQ6ZT62 677 aa7.56□□□□□ -1.2
CPNE4-207ENST00000506687 RBM33Q96EV2 1170 aaKnown RBP7.56□□□□□ -1.2
CPNE4-207ENST00000506687 MYT1LQ9UL68 1186 aa7.56□□□□□ -1.2
CPNE4-207ENST00000506687 AK7Q96M32 723 aa7.55□□□□□ -1.2
CPNE4-207ENST00000506687 GPATCH8Q9UKJ3 1502 aaKnown RBP7.55□□□□□ -1.2
CPNE4-207ENST00000506687 MTUS2Q5JR59 1369 aa7.55□□□□□ -1.2
CPNE4-207ENST00000506687 ZNF518AQ6AHZ1 1483 aa7.55□□□□□ -1.2
CPNE4-207ENST00000506687 CEP170BQ9Y4F5 1589 aaPredicted RBP7.54□□□□□ -1.2
CPNE4-207ENST00000506687 FAM135BQ49AJ0 1406 aa7.54□□□□□ -1.2
CPNE4-207ENST00000506687 EHBP1L1Q8N3D4 1523 aa7.54□□□□□ -1.2
CPNE4-207ENST00000506687 RXRBP28702 533 aa7.54□□□□□ -1.2
CPNE4-207ENST00000506687 EFCAB2Q5VUJ9 269 aa7.54□□□□□ -1.2
CPNE4-207ENST00000506687 LRRC7Q96NW7 1537 aa7.53□□□□□ -1.2
CPNE4-207ENST00000506687 SMYD5Q6GMV2 418 aa7.53□□□□□ -1.2
CPNE4-207ENST00000506687 ANKLE2Q86XL3 938 aa7.53□□□□□ -1.2
CPNE4-207ENST00000506687 AFAP1Q8N556 730 aa7.53□□□□□ -1.2
CPNE4-207ENST00000506687 KDM4CQ9H3R0 1056 aa7.53□□□□□ -1.2
CPNE4-207ENST00000506687 VWDEQ8N2E2 1590 aa7.53□□□□□ -1.2
CPNE4-207ENST00000506687 CDC42BPBQ9Y5S2 1711 aa7.52□□□□□ -1.2
CPNE4-207ENST00000506687 NCOA2Q15596 1464 aa7.52□□□□□ -1.21
CPNE4-207ENST00000506687 CDK12Q9NYV4 1490 aaPredicted RBP7.52□□□□□ -1.21
CPNE4-207ENST00000506687 C1QBPQ07021 282 aaKnown RBP7.52□□□□□ -1.21
CPNE4-207ENST00000506687 MKRN3Q13064 507 aaKnown RBP7.52□□□□□ -1.21
CPNE4-207ENST00000506687 NECTIN2Q92692 538 aa7.52□□□□□ -1.21
CPNE4-207ENST00000506687 CDC42BPAQ5VT25 1732 aa7.52□□□□□ -1.21
CPNE4-207ENST00000506687 RNF17Q9BXT8 1623 aaKnown RBP7.52□□□□□ -1.21
CPNE4-207ENST00000506687 ZNF142P52746 1687 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-207ENST00000506687 A2ML1A8K2U0 1454 aa7.51□□□□□ -1.21
CPNE4-207ENST00000506687 CCNB3Q8WWL7 1395 aa7.51□□□□□ -1.21
CPNE4-207ENST00000506687 PYGBP11216 843 aa7.51□□□□□ -1.21
CPNE4-207ENST00000506687 KRI1Q8N9T8 703 aaKnown RBP7.51□□□□□ -1.21
CPNE4-207ENST00000506687 MYO5CQ9NQX4 1742 aa7.51□□□□□ -1.21
CPNE4-207ENST00000506687 MYO3AQ8NEV4 1616 aa7.51□□□□□ -1.21
CPNE4-207ENST00000506687 DIP2CQ9Y2E4 1556 aa7.5□□□□□ -1.21
CPNE4-207ENST00000506687 SUPT6HQ7KZ85 1726 aaKnown RBP7.5□□□□□ -1.21
CPNE4-207ENST00000506687 PREX2Q70Z35 1606 aa7.5□□□□□ -1.21
CPNE4-207ENST00000506687 KDM5CP41229 1560 aa7.5□□□□□ -1.21
CPNE4-207ENST00000506687 MLH3Q9UHC1 1453 aa7.49□□□□□ -1.21
CPNE4-207ENST00000506687 JCADQ9P266 1359 aa7.49□□□□□ -1.21
CPNE4-207ENST00000506687 CFDP1Q9UEE9 299 aaPredicted RBP7.49□□□□□ -1.21
CPNE4-207ENST00000506687 NPHP4O75161 1426 aaPredicted RBP7.49□□□□□ -1.21
CPNE4-207ENST00000506687 NEURL4Q96JN8 1562 aa7.49□□□□□ -1.21
CPNE4-207ENST00000506687 ZNF644Q9H582 1327 aaPredicted RBP7.49□□□□□ -1.21
CPNE4-207ENST00000506687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.48□□□□□ -1.21
CPNE4-207ENST00000506687 ARHGAP5Q13017 1502 aa7.48□□□□□ -1.21
CPNE4-207ENST00000506687 MEX3CQ5U5Q3 659 aaKnown RBP7.48□□□□□ -1.21
CPNE4-207ENST00000506687 KIAA1107Q9UPP5 1409 aa7.48□□□□□ -1.21
CPNE4-207ENST00000506687 SETBP1Q9Y6X0 1596 aa7.48□□□□□ -1.21
CPNE4-207ENST00000506687 MED14O60244 1454 aa7.48□□□□□ -1.21
CPNE4-207ENST00000506687 MBD5Q9P267 1494 aa7.48□□□□□ -1.21
CPNE4-207ENST00000506687 MROH2AA6NES4 1674 aa7.47□□□□□ -1.21
CPNE4-207ENST00000506687 SAMD9LQ8IVG5 1584 aa7.47□□□□□ -1.21
CPNE4-207ENST00000506687 MYOM3Q5VTT5 1437 aa7.47□□□□□ -1.21
CPNE4-207ENST00000506687 MIA2Q96PC5 1412 aa7.47□□□□□ -1.21
CPNE4-207ENST00000506687 RASEFQ8IZ41 740 aa7.47□□□□□ -1.21
CPNE4-207ENST00000506687 THEMISQ8N1K5 641 aaPredicted RBP7.47□□□□□ -1.21
CPNE4-207ENST00000506687 SPATA31A6Q5VVP1 1343 aa7.47□□□□□ -1.21
CPNE4-207ENST00000506687 ABCC1P33527 1531 aa7.47□□□□□ -1.21
CPNE4-207ENST00000506687 SYNMO15061 1565 aa7.46□□□□□ -1.21
CPNE4-207ENST00000506687 DNMT1P26358 1616 aaKnown RBP7.46□□□□□ -1.21
CPNE4-207ENST00000506687 HNRNPMP52272 730 aaKnown RBP eCLIP7.46□□□□□ -1.22
CPNE4-207ENST00000506687 ITSN2Q9NZM3 1697 aa7.45□□□□□ -1.22
CPNE4-207ENST00000506687 PLEKHH2Q8IVE3 1493 aa7.45□□□□□ -1.22
CPNE4-207ENST00000506687 NUTM2BA6NNL0 878 aaPredicted RBP7.45□□□□□ -1.22
CPNE4-207ENST00000506687 NUTM2EB1AL46 878 aaPredicted RBP7.45□□□□□ -1.22
CPNE4-207ENST00000506687 PDE4DQ08499 809 aa7.45□□□□□ -1.22
CPNE4-207ENST00000506687 NUTM2DQ5VT03 806 aaPredicted RBP7.45□□□□□ -1.22
CPNE4-207ENST00000506687 PPARGC1BQ86YN6 1023 aaKnown RBP7.45□□□□□ -1.22
CPNE4-207ENST00000506687 NUTM2AQ8IVF1 878 aaPredicted RBP7.45□□□□□ -1.22
CPNE4-207ENST00000506687 ZNF777Q9ULD5 760 aaPredicted RBP7.45□□□□□ -1.22
CPNE4-207ENST00000506687 TRIM66O15016 1216 aa7.44□□□□□ -1.22
CPNE4-207ENST00000506687 RSPH4AQ5TD94 716 aa7.44□□□□□ -1.22
CPNE4-207ENST00000506687 ABCA6Q8N139 1617 aa7.44□□□□□ -1.22
CPNE4-207ENST00000506687 ATAD2Q6PL18 1390 aa7.44□□□□□ -1.22
CPNE4-207ENST00000506687 FGD6Q6ZV73 1430 aa7.44□□□□□ -1.22
CPNE4-207ENST00000506687 CAMSAP2Q08AD1 1489 aa7.43□□□□□ -1.22
CPNE4-207ENST00000506687 SYCP2Q9BX26 1530 aa7.43□□□□□ -1.22
CPNE4-207ENST00000506687 ZNF316A6NFI3 1004 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-207ENST00000506687 YY1P25490 414 aa7.43□□□□□ -1.22
CPNE4-207ENST00000506687 RBM26Q5T8P6 1007 aaKnown RBP7.43□□□□□ -1.22
CPNE4-207ENST00000506687 CCDC82Q8N4S0 544 aa7.43□□□□□ -1.22
CPNE4-207ENST00000506687 FLIIQ13045 1269 aa7.42□□□□□ -1.22
CPNE4-207ENST00000506687 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
CPNE4-207ENST00000506687 GPIHBP1Q8IV16 184 aa7.42□□□□□ -1.22
CPNE4-207ENST00000506687 KCTD17Q8N5Z5 321 aa7.42□□□□□ -1.22
CPNE4-207ENST00000506687 MFRPQ9BY79 579 aa7.42□□□□□ -1.22
CPNE4-207ENST00000506687 FAM117AQ9C073 453 aa7.42□□□□□ -1.22
CPNE4-207ENST00000506687 TNRQ92752 1358 aa7.42□□□□□ -1.22
CPNE4-207ENST00000506687 KDM5DQ9BY66 1539 aa7.42□□□□□ -1.22
CPNE4-207ENST00000506687 ARHGEF5Q12774 1597 aa7.42□□□□□ -1.22
CPNE4-207ENST00000506687 LRP6O75581 1613 aa7.41□□□□□ -1.22
CPNE4-207ENST00000506687 PTPN23Q9H3S7 1636 aa7.41□□□□□ -1.22
CPNE4-207ENST00000506687 PPP1R37O75864 691 aa7.41□□□□□ -1.22
CPNE4-207ENST00000506687 RBM6P78332 1123 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms