RNA–Protein interactions for RNA: ENST00000506239.6

SMN1-205, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-205ENST00000506239 CHGAP10645 457 aaKnown RBP25.83■■□□□ 1.73
SMN1-205ENST00000506239 IDI1Q13907 227 aa25.83■■□□□ 1.73
SMN1-205ENST00000506239 MLECQ14165 292 aa25.83■■□□□ 1.73
SMN1-205ENST00000506239 IQGAP1P46940 1657 aa25.83■■□□□ 1.72
SMN1-205ENST00000506239 ST20-MTHFSA0A0A6YYL1 179 aa25.82■■□□□ 1.72
SMN1-205ENST00000506239 ADGRF5Q8IZF2 1346 aa25.82■■□□□ 1.72
SMN1-205ENST00000506239 TMEM131LA2VDJ0 1609 aa25.81■■□□□ 1.72
SMN1-205ENST00000506239 NEXMIFQ5QGS0 1516 aa25.81■■□□□ 1.72
SMN1-205ENST00000506239 FBXO31Q5XUX0 539 aaPredicted RBP25.8■■□□□ 1.72
SMN1-205ENST00000506239 PIK3C2GO75747 1445 aa25.79■■□□□ 1.72
SMN1-205ENST00000506239 SCAF11Q99590 1463 aaKnown RBP25.78■■□□□ 1.72
SMN1-205ENST00000506239 ESF1Q9H501 851 aaKnown RBP25.78■■□□□ 1.72
SMN1-205ENST00000506239 ZMYM3Q14202 1370 aa25.77■■□□□ 1.72
SMN1-205ENST00000506239 ZFYVE9O95405 1425 aa25.76■■□□□ 1.71
SMN1-205ENST00000506239 SETBP1Q9Y6X0 1596 aa25.75■■□□□ 1.71
SMN1-205ENST00000506239 MYO5BQ9ULV0 1848 aa25.74■■□□□ 1.71
SMN1-205ENST00000506239 ANP32CO43423 234 aa25.72■■□□□ 1.71
SMN1-205ENST00000506239 VGFO15240 615 aaPredicted RBP25.71■■□□□ 1.71
SMN1-205ENST00000506239 CFAP70Q5T0N1 1121 aa25.71■■□□□ 1.71
SMN1-205ENST00000506239 TESK2Q96S53 571 aa25.71■■□□□ 1.71
SMN1-205ENST00000506239 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
SMN1-205ENST00000506239 C14orf93Q9H972 538 aaKnown RBP25.69■■□□□ 1.7
SMN1-205ENST00000506239 ADGRB1O14514 1584 aa25.66■■□□□ 1.7
SMN1-205ENST00000506239 A2ML1A8K2U0 1454 aa25.66■■□□□ 1.7
SMN1-205ENST00000506239 CCER2I3L3R5 266 aa25.64■■□□□ 1.69
SMN1-205ENST00000506239 MYO3AQ8NEV4 1616 aa25.63■■□□□ 1.69
SMN1-205ENST00000506239 KDM5AP29375 1690 aaKnown RBP25.63■■□□□ 1.69
SMN1-205ENST00000506239 TNRQ92752 1358 aa25.63■■□□□ 1.69
SMN1-205ENST00000506239 FER1L4A9Z1Z3 1794 aa25.62■■□□□ 1.69
SMN1-205ENST00000506239 TMF1P82094 1093 aa25.61■■□□□ 1.69
SMN1-205ENST00000506239 DISP3Q9P2K9 1392 aa25.61■■□□□ 1.69
SMN1-205ENST00000506239 STAG3Q9UJ98 1225 aa25.6■■□□□ 1.69
SMN1-205ENST00000506239 SLC24A1O60721 1099 aa25.57■■□□□ 1.68
SMN1-205ENST00000506239 POLR3GLQ9BT43 218 aa25.57■■□□□ 1.68
SMN1-205ENST00000506239 C3P01024 1663 aa25.57■■□□□ 1.68
SMN1-205ENST00000506239 SBNO2Q9Y2G9 1366 aa25.56■■□□□ 1.68
SMN1-205ENST00000506239 NUTM2DQ5VT03 806 aaPredicted RBP25.56■■□□□ 1.68
SMN1-205ENST00000506239 NLRP1Q9C000 1473 aa25.55■■□□□ 1.68
SMN1-205ENST00000506239 RIMS2Q9UQ26 1411 aa25.55■■□□□ 1.68
SMN1-205ENST00000506239 UBR1Q8IWV7 1749 aa25.52■■□□□ 1.68
SMN1-205ENST00000506239 CDCA8Q53HL2 280 aa25.52■■□□□ 1.68
SMN1-205ENST00000506239 ASXL1Q8IXJ9 1541 aa25.52■■□□□ 1.68
SMN1-205ENST00000506239 PRKRIP1Q9H875 184 aaPredicted RBP25.51■■□□□ 1.67
SMN1-205ENST00000506239 ALKQ9UM73 1620 aa25.49■■□□□ 1.67
SMN1-205ENST00000506239 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.48■■□□□ 1.67
SMN1-205ENST00000506239 CENPJQ9HC77 1338 aaPredicted RBP25.48■■□□□ 1.67
SMN1-205ENST00000506239 TMEM132EQ6IEE7 984 aa25.48■■□□□ 1.67
SMN1-205ENST00000506239 YTHDC1Q96MU7 727 aaKnown RBP25.48■■□□□ 1.67
SMN1-205ENST00000506239 ARHGEF28Q8N1W1 1705 aaKnown RBP25.47■■□□□ 1.67
SMN1-205ENST00000506239 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
SMN1-205ENST00000506239 QRICH2Q9H0J4 1663 aa25.46■■□□□ 1.67
SMN1-205ENST00000506239 TRAK1Q9UPV9 953 aa25.45■■□□□ 1.66
SMN1-205ENST00000506239 CEBPAP49715 358 aaPredicted RBP25.44■■□□□ 1.66
SMN1-205ENST00000506239 SETD1AO15047 1707 aaKnown RBP25.44■■□□□ 1.66
SMN1-205ENST00000506239 HDGFP51858 240 aaKnown RBP25.44■■□□□ 1.66
SMN1-205ENST00000506239 TMEM2Q9UHN6 1383 aa25.43■■□□□ 1.66
SMN1-205ENST00000506239 ADAMTSL3P82987 1691 aa25.42■■□□□ 1.66
SMN1-205ENST00000506239 NRXN3Q9Y4C0 1643 aa25.41■■□□□ 1.66
SMN1-205ENST00000506239 KTN1Q86UP2 1357 aaKnown RBP25.4■■□□□ 1.66
SMN1-205ENST00000506239 YTHDC2Q9H6S0 1430 aaKnown RBP25.4■■□□□ 1.66
SMN1-205ENST00000506239 PTPRMP28827 1452 aa25.4■■□□□ 1.66
SMN1-205ENST00000506239 MYOM1P52179 1685 aa25.4■■□□□ 1.66
SMN1-205ENST00000506239 RIMS1Q86UR5 1692 aaKnown RBP25.39■■□□□ 1.66
SMN1-205ENST00000506239 PER1O15534 1290 aaPredicted RBP25.38■■□□□ 1.65
SMN1-205ENST00000506239 SLIT1O75093 1534 aa25.36■■□□□ 1.65
SMN1-205ENST00000506239 DLC1Q96QB1 1528 aa25.35■■□□□ 1.65
SMN1-205ENST00000506239 ARHGAP23Q9P227 1491 aa25.35■■□□□ 1.65
SMN1-205ENST00000506239 PANK3Q9H999 370 aa25.35■■□□□ 1.65
SMN1-205ENST00000506239 PUS7Q96PZ0 661 aaKnown RBP25.33■■□□□ 1.65
SMN1-205ENST00000506239 LRPPRCP42704 1394 aaKnown RBP25.33■■□□□ 1.64
SMN1-205ENST00000506239 PLEKHG1Q9ULL1 1385 aa25.31■■□□□ 1.64
SMN1-205ENST00000506239 RALBP1Q15311 655 aa25.31■■□□□ 1.64
SMN1-205ENST00000506239 TULP4Q9NRJ4 1543 aa25.3■■□□□ 1.64
SMN1-205ENST00000506239 STK26Q9P289 416 aa25.29■■□□□ 1.64
SMN1-205ENST00000506239 ABCC11Q96J66 1382 aa25.29■■□□□ 1.64
SMN1-205ENST00000506239 PARD3Q8TEW0 1356 aa25.28■■□□□ 1.64
SMN1-205ENST00000506239 CEP170BQ9Y4F5 1589 aaPredicted RBP25.28■■□□□ 1.64
SMN1-205ENST00000506239 SENP3Q9H4L4 574 aaPredicted RBP25.27■■□□□ 1.64
SMN1-205ENST00000506239 EVC2Q86UK5 1308 aa25.27■■□□□ 1.64
SMN1-205ENST00000506239 KNDC1Q76NI1 1749 aa25.27■■□□□ 1.64
SMN1-205ENST00000506239 THEMISQ8N1K5 641 aaPredicted RBP25.26■■□□□ 1.63
SMN1-205ENST00000506239 ADAMTS13Q76LX8 1427 aa25.26■■□□□ 1.63
SMN1-205ENST00000506239 ZNF142P52746 1687 aaPredicted RBP25.25■■□□□ 1.63
SMN1-205ENST00000506239 METP08581 1390 aa25.25■■□□□ 1.63
SMN1-205ENST00000506239 LTKP29376 864 aa25.25■■□□□ 1.63
SMN1-205ENST00000506239 CCDC184Q52MB2 194 aa25.25■■□□□ 1.63
SMN1-205ENST00000506239 TECPR2O15040 1411 aa25.24■■□□□ 1.63
SMN1-205ENST00000506239 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
SMN1-205ENST00000506239 PRAM1Q96QH2 718 aa25.24■■□□□ 1.63
SMN1-205ENST00000506239 EID1Q9Y6B2 187 aa25.24■■□□□ 1.63
SMN1-205ENST00000506239 MED14O60244 1454 aa25.23■■□□□ 1.63
SMN1-205ENST00000506239 MRS2Q9HD23 443 aa25.23■■□□□ 1.63
SMN1-205ENST00000506239 MYBBP1AQ9BQG0 1328 aaKnown RBP25.23■■□□□ 1.63
SMN1-205ENST00000506239 TXNDC2Q86VQ3 553 aa25.22■■□□□ 1.63
SMN1-205ENST00000506239 NPC1L1Q9UHC9 1359 aa25.22■■□□□ 1.63
SMN1-205ENST00000506239 CPS1P31327 1500 aa25.21■■□□□ 1.63
SMN1-205ENST00000506239 SIRT1Q96EB6 747 aa25.21■■□□□ 1.63
SMN1-205ENST00000506239 POGKQ9P215 609 aa25.21■■□□□ 1.63
SMN1-205ENST00000506239 KNSTRNQ9Y448 316 aa25.21■■□□□ 1.63
SMN1-205ENST00000506239 SETD1BQ9UPS6 1966 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms