RNA–Protein interactions for RNA: ENST00000505119.1

NEK1-202, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-202ENST00000505119 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
NEK1-202ENST00000505119 ITGBL1O95965 494 aaPredicted RBP13.34□□□□□ -0.27
NEK1-202ENST00000505119 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
NEK1-202ENST00000505119 MAP2K5Q13163 448 aa13.33□□□□□ -0.28
NEK1-202ENST00000505119 APLP1P51693 650 aa13.28□□□□□ -0.28
NEK1-202ENST00000505119 PRR14Q9BWN1 585 aa13.27□□□□□ -0.29
NEK1-202ENST00000505119 MINK1Q8N4C8 1332 aaPredicted RBP13.25□□□□□ -0.29
NEK1-202ENST00000505119 IRF6O14896 467 aa13.25□□□□□ -0.29
NEK1-202ENST00000505119 KCNC4Q03721 635 aa13.24□□□□□ -0.29
NEK1-202ENST00000505119 PHOX2BQ99453 314 aa13.24□□□□□ -0.29
NEK1-202ENST00000505119 MTRQ99707 1265 aa13.22□□□□□ -0.29
NEK1-202ENST00000505119 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
NEK1-202ENST00000505119 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.29
NEK1-202ENST00000505119 ZC3H15Q8WU90 426 aaKnown RBP13.21□□□□□ -0.29
NEK1-202ENST00000505119 NLRP7Q8WX94 980 aa13.21□□□□□ -0.29
NEK1-202ENST00000505119 CCDC102AQ96A19 550 aa13.21□□□□□ -0.29
NEK1-202ENST00000505119 CFHP08603 1231 aa13.2□□□□□ -0.3
NEK1-202ENST00000505119 SLC10A3P09131 477 aa13.2□□□□□ -0.3
NEK1-202ENST00000505119 KMT5BQ4FZB7 885 aa13.2□□□□□ -0.3
NEK1-202ENST00000505119 A0A0G2JS52 829 aa13.19□□□□□ -0.3
NEK1-202ENST00000505119 ZMYND10O75800 440 aa13.19□□□□□ -0.3
NEK1-202ENST00000505119 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
NEK1-202ENST00000505119 IL21Q9HBE4 155 aa13.19□□□□□ -0.3
NEK1-202ENST00000505119 ACTN4O43707 911 aaKnown RBP13.17□□□□□ -0.3
NEK1-202ENST00000505119 BARGINQ6ZT62 677 aa13.17□□□□□ -0.3
NEK1-202ENST00000505119 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
NEK1-202ENST00000505119 BCANQ96GW7 911 aa13.16□□□□□ -0.3
NEK1-202ENST00000505119 PCDHB3Q9Y5E6 796 aa13.16□□□□□ -0.3
NEK1-202ENST00000505119 DDX11L8A8MPP1 907 aa13.14□□□□□ -0.31
NEK1-202ENST00000505119 RDH13Q8NBN7 331 aa13.14□□□□□ -0.31
NEK1-202ENST00000505119 COPS2P61201 443 aa13.13□□□□□ -0.31
NEK1-202ENST00000505119 KRI1Q8N9T8 703 aaKnown RBP13.13□□□□□ -0.31
NEK1-202ENST00000505119 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
NEK1-202ENST00000505119 BLOC1S3Q6QNY0 202 aa13.1□□□□□ -0.31
NEK1-202ENST00000505119 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
NEK1-202ENST00000505119 ZPR1O75312 459 aa13.07□□□□□ -0.32
NEK1-202ENST00000505119 RGS20O76081 388 aa13.07□□□□□ -0.32
NEK1-202ENST00000505119 CLCN1P35523 988 aa13.07□□□□□ -0.32
NEK1-202ENST00000505119 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
NEK1-202ENST00000505119 GCGRP47871 477 aa13.06□□□□□ -0.32
NEK1-202ENST00000505119 CD46P15529 392 aa13.05□□□□□ -0.32
NEK1-202ENST00000505119 NR1I2O75469 434 aa13.03□□□□□ -0.32
NEK1-202ENST00000505119 FUT2Q10981 343 aa13.02□□□□□ -0.33
NEK1-202ENST00000505119 AMHR2Q16671 573 aa13.02□□□□□ -0.33
NEK1-202ENST00000505119 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
NEK1-202ENST00000505119 TMUB1Q9BVT8 246 aa13.02□□□□□ -0.33
NEK1-202ENST00000505119 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
NEK1-202ENST00000505119 PUS10Q3MIT2 529 aaKnown RBP13□□□□□ -0.33
NEK1-202ENST00000505119 TLL1O43897 1013 aa12.99□□□□□ -0.33
NEK1-202ENST00000505119 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
NEK1-202ENST00000505119 TTLL12Q14166 644 aaPredicted RBP12.98□□□□□ -0.33
NEK1-202ENST00000505119 PPP1R18Q6NYC8 613 aa12.98□□□□□ -0.33
NEK1-202ENST00000505119 AK7Q96M32 723 aa12.98□□□□□ -0.33
NEK1-202ENST00000505119 GGCXP38435 758 aa12.97□□□□□ -0.33
NEK1-202ENST00000505119 MORN1Q5T089 497 aa12.97□□□□□ -0.33
NEK1-202ENST00000505119 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.33
NEK1-202ENST00000505119 REPIN1Q9BWE0 567 aaKnown RBP12.96□□□□□ -0.33
NEK1-202ENST00000505119 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
NEK1-202ENST00000505119 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.95□□□□□ -0.34
NEK1-202ENST00000505119 TRIM66O15016 1216 aa12.94□□□□□ -0.34
NEK1-202ENST00000505119 KDM4AO75164 1064 aa12.94□□□□□ -0.34
NEK1-202ENST00000505119 ADH1BP00325 375 aa12.94□□□□□ -0.34
NEK1-202ENST00000505119 USP46P62068 366 aa12.92□□□□□ -0.34
NEK1-202ENST00000505119 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
NEK1-202ENST00000505119 SLC24A3Q9HC58 644 aa12.91□□□□□ -0.34
NEK1-202ENST00000505119 SLC27A5Q9Y2P5 690 aa12.91□□□□□ -0.34
NEK1-202ENST00000505119 SSTR3P32745 418 aaPredicted RBP12.9□□□□□ -0.34
NEK1-202ENST00000505119 PARP9Q8IXQ6 854 aa12.9□□□□□ -0.34
NEK1-202ENST00000505119 SPSB2Q99619 263 aa12.9□□□□□ -0.34
NEK1-202ENST00000505119 THAP11Q96EK4 314 aa12.89□□□□□ -0.35
NEK1-202ENST00000505119 SALL2Q9Y467 1007 aaPredicted RBP12.89□□□□□ -0.35
NEK1-202ENST00000505119 S1PR4O95977 384 aa12.88□□□□□ -0.35
NEK1-202ENST00000505119 HOXA2O43364 376 aa12.87□□□□□ -0.35
NEK1-202ENST00000505119 FMNL1O95466 1100 aaPredicted RBP12.87□□□□□ -0.35
NEK1-202ENST00000505119 SLC6A16Q9GZN6 736 aa12.87□□□□□ -0.35
NEK1-202ENST00000505119 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
NEK1-202ENST00000505119 Q3C1V9 767 aa12.85□□□□□ -0.35
NEK1-202ENST00000505119 NUTM1Q86Y26 1132 aa12.85□□□□□ -0.35
NEK1-202ENST00000505119 PDE4DQ08499 809 aa12.84□□□□□ -0.35
NEK1-202ENST00000505119 BRICD5Q6PL45 260 aa12.83□□□□□ -0.36
NEK1-202ENST00000505119 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.36
NEK1-202ENST00000505119 ANKLE1Q8NAG6 615 aa12.83□□□□□ -0.36
NEK1-202ENST00000505119 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
NEK1-202ENST00000505119 HLA-CQ95604 372 aa12.82□□□□□ -0.36
NEK1-202ENST00000505119 V9GY48 417 aaPredicted RBP12.82□□□□□ -0.36
NEK1-202ENST00000505119 MS4A1P11836 297 aa12.8□□□□□ -0.36
NEK1-202ENST00000505119 MSS51Q4VC12 460 aa12.8□□□□□ -0.36
NEK1-202ENST00000505119 BEGAINQ9BUH8 593 aa12.8□□□□□ -0.36
NEK1-202ENST00000505119 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
NEK1-202ENST00000505119 SPIRE2Q8WWL2 714 aa12.79□□□□□ -0.36
NEK1-202ENST00000505119 PPEF1O14829 653 aaPredicted RBP12.77□□□□□ -0.37
NEK1-202ENST00000505119 GUCA2AQ02747 115 aa12.77□□□□□ -0.37
NEK1-202ENST00000505119 IRX2Q9BZI1 471 aaPredicted RBP12.77□□□□□ -0.37
NEK1-202ENST00000505119 PRDM9Q9NQV7 894 aa12.76□□□□□ -0.37
NEK1-202ENST00000505119 DIXDC1Q155Q3 683 aa12.75□□□□□ -0.37
NEK1-202ENST00000505119 USB1Q9BQ65 265 aaKnown RBP12.75□□□□□ -0.37
NEK1-202ENST00000505119 FDX1P10109 184 aa12.74□□□□□ -0.37
NEK1-202ENST00000505119 MOXD2PA6NHM9 499 aa12.72□□□□□ -0.37
NEK1-202ENST00000505119 SLC19A1P41440 591 aa12.72□□□□□ -0.37
NEK1-202ENST00000505119 EMID1Q96A84 441 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms