RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
CSF1R-203ENST00000504875 COL17A1Q9UMD9 1497 aaPredicted RBP12.79□□□□□ -0.36
CSF1R-203ENST00000504875 UNC13BO14795 1591 aa12.79□□□□□ -0.36
CSF1R-203ENST00000504875 POLR1AO95602 1720 aaPredicted RBP12.79□□□□□ -0.36
CSF1R-203ENST00000504875 CFAP65Q6ZU64 1925 aaKnown RBP12.79□□□□□ -0.36
CSF1R-203ENST00000504875 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
CSF1R-203ENST00000504875 MLECQ14165 292 aa12.79□□□□□ -0.36
CSF1R-203ENST00000504875 CLASP1Q7Z460 1538 aa12.79□□□□□ -0.36
CSF1R-203ENST00000504875 MORC1Q86VD1 984 aa12.78□□□□□ -0.36
CSF1R-203ENST00000504875 IQGAP3Q86VI3 1631 aa12.78□□□□□ -0.36
CSF1R-203ENST00000504875 ATP7AQ04656 1500 aa12.78□□□□□ -0.36
CSF1R-203ENST00000504875 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
CSF1R-203ENST00000504875 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.37
CSF1R-203ENST00000504875 TRPM1Q7Z4N2 1603 aa12.77□□□□□ -0.37
CSF1R-203ENST00000504875 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.37
CSF1R-203ENST00000504875 ATP10AO60312 1499 aa12.77□□□□□ -0.37
CSF1R-203ENST00000504875 SCAF11Q99590 1463 aaKnown RBP12.76□□□□□ -0.37
CSF1R-203ENST00000504875 IL27Q8NEV9 243 aa12.76□□□□□ -0.37
CSF1R-203ENST00000504875 APAF1O14727 1248 aa12.76□□□□□ -0.37
CSF1R-203ENST00000504875 LRPPRCP42704 1394 aaKnown RBP12.75□□□□□ -0.37
CSF1R-203ENST00000504875 SRPK2P78362 688 aaKnown RBP12.75□□□□□ -0.37
CSF1R-203ENST00000504875 GOLGA2Q08379 1002 aa12.75□□□□□ -0.37
CSF1R-203ENST00000504875 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.75□□□□□ -0.37
CSF1R-203ENST00000504875 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
CSF1R-203ENST00000504875 FANCIQ9NVI1 1328 aa12.74□□□□□ -0.37
CSF1R-203ENST00000504875 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
CSF1R-203ENST00000504875 POGKQ9P215 609 aa12.74□□□□□ -0.37
CSF1R-203ENST00000504875 UGGT1Q9NYU2 1555 aa12.74□□□□□ -0.37
CSF1R-203ENST00000504875 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
CSF1R-203ENST00000504875 NOS1P29475 1434 aa12.73□□□□□ -0.37
CSF1R-203ENST00000504875 CRBNQ96SW2 442 aa12.73□□□□□ -0.37
CSF1R-203ENST00000504875 ESF1Q9H501 851 aaKnown RBP12.73□□□□□ -0.37
CSF1R-203ENST00000504875 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
CSF1R-203ENST00000504875 RRP7AQ9Y3A4 280 aaKnown RBP12.72□□□□□ -0.37
CSF1R-203ENST00000504875 PRDM15P57071 1507 aaPredicted RBP12.71□□□□□ -0.37
CSF1R-203ENST00000504875 ZNF518AQ6AHZ1 1483 aa12.71□□□□□ -0.37
CSF1R-203ENST00000504875 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
CSF1R-203ENST00000504875 FAM69CQ0P6D2 419 aa12.71□□□□□ -0.38
CSF1R-203ENST00000504875 CFAP53Q96M91 514 aa12.71□□□□□ -0.38
CSF1R-203ENST00000504875 NOP58Q9Y2X3 529 aaKnown RBP12.71□□□□□ -0.38
CSF1R-203ENST00000504875 E9PCH4 1651 aa12.7□□□□□ -0.38
CSF1R-203ENST00000504875 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
CSF1R-203ENST00000504875 FRAT1Q92837 279 aaPredicted RBP12.69□□□□□ -0.38
CSF1R-203ENST00000504875 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
CSF1R-203ENST00000504875 TRPM2O94759 1503 aa12.69□□□□□ -0.38
CSF1R-203ENST00000504875 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
CSF1R-203ENST00000504875 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
CSF1R-203ENST00000504875 MINK1Q8N4C8 1332 aaPredicted RBP12.68□□□□□ -0.38
CSF1R-203ENST00000504875 MAGI2Q86UL8 1455 aa12.68□□□□□ -0.38
CSF1R-203ENST00000504875 CLTCL1P53675 1640 aa12.68□□□□□ -0.38
CSF1R-203ENST00000504875 PTPRTO14522 1441 aa12.67□□□□□ -0.38
CSF1R-203ENST00000504875 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
CSF1R-203ENST00000504875 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSF1R-203ENST00000504875 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
CSF1R-203ENST00000504875 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
CSF1R-203ENST00000504875 RGS3P49796 1198 aa12.66□□□□□ -0.38
CSF1R-203ENST00000504875 CARD14Q9BXL6 1004 aa12.66□□□□□ -0.38
CSF1R-203ENST00000504875 IDI1Q13907 227 aa12.66□□□□□ -0.38
CSF1R-203ENST00000504875 C20orf194Q5TEA3 1177 aa12.66□□□□□ -0.38
CSF1R-203ENST00000504875 SKAP1Q86WV1 359 aa12.66□□□□□ -0.38
CSF1R-203ENST00000504875 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
CSF1R-203ENST00000504875 RNF123Q5XPI4 1314 aa12.65□□□□□ -0.38
CSF1R-203ENST00000504875 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.38
CSF1R-203ENST00000504875 CGNL1Q0VF96 1302 aa12.65□□□□□ -0.39
CSF1R-203ENST00000504875 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.39
CSF1R-203ENST00000504875 NSD3Q9BZ95 1437 aa12.64□□□□□ -0.39
CSF1R-203ENST00000504875 ASXL1Q8IXJ9 1541 aa12.64□□□□□ -0.39
CSF1R-203ENST00000504875 TET3O43151 1660 aa12.64□□□□□ -0.39
CSF1R-203ENST00000504875 MTHFSP49914 203 aa12.64□□□□□ -0.39
CSF1R-203ENST00000504875 PAK3O75914 559 aaPredicted RBP12.64□□□□□ -0.39
CSF1R-203ENST00000504875 UBE2Q2Q8WVN8 375 aa12.64□□□□□ -0.39
CSF1R-203ENST00000504875 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
CSF1R-203ENST00000504875 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
CSF1R-203ENST00000504875 ABCA9Q8IUA7 1624 aa12.63□□□□□ -0.39
CSF1R-203ENST00000504875 MADDQ8WXG6 1647 aa12.63□□□□□ -0.39
CSF1R-203ENST00000504875 PLEKHH1Q9ULM0 1364 aa12.63□□□□□ -0.39
CSF1R-203ENST00000504875 NPATQ14207 1427 aa12.62□□□□□ -0.39
CSF1R-203ENST00000504875 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
CSF1R-203ENST00000504875 GGNBP2Q9H3C7 697 aa12.62□□□□□ -0.39
CSF1R-203ENST00000504875 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
CSF1R-203ENST00000504875 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
CSF1R-203ENST00000504875 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
CSF1R-203ENST00000504875 E9PSI1 815 aa12.61□□□□□ -0.39
CSF1R-203ENST00000504875 NEFMP07197 916 aa12.61□□□□□ -0.39
CSF1R-203ENST00000504875 BCAR3O75815 825 aa12.61□□□□□ -0.39
CSF1R-203ENST00000504875 PDE4AP27815 886 aa12.6□□□□□ -0.39
CSF1R-203ENST00000504875 PRAM1Q96QH2 718 aa12.6□□□□□ -0.39
CSF1R-203ENST00000504875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSF1R-203ENST00000504875 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
CSF1R-203ENST00000504875 MAPK8IP3Q9UPT6 1336 aa12.6□□□□□ -0.39
CSF1R-203ENST00000504875 SLFN5Q08AF3 891 aa12.59□□□□□ -0.39
CSF1R-203ENST00000504875 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
CSF1R-203ENST00000504875 SLC52A1Q9NWF4 448 aa12.59□□□□□ -0.39
CSF1R-203ENST00000504875 BLMP54132 1417 aaPredicted RBP12.59□□□□□ -0.39
CSF1R-203ENST00000504875 KIF1BO60333 1816 aa12.59□□□□□ -0.39
CSF1R-203ENST00000504875 HDGFL2Q7Z4V5 671 aaPredicted RBP12.58□□□□□ -0.4
CSF1R-203ENST00000504875 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
CSF1R-203ENST00000504875 TERF2IPQ9NYB0 399 aa12.58□□□□□ -0.4
CSF1R-203ENST00000504875 LAMC1P11047 1609 aa12.58□□□□□ -0.4
CSF1R-203ENST00000504875 EFCAB6Q5THR3 1501 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms