RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 CCDC94Q9BW85 323 aaPredicted RBP12.61□□□□□ -0.39
ITGA1-203ENST00000504669 SWAP70Q9UH65 585 aa12.61□□□□□ -0.39
ITGA1-203ENST00000504669 MICALCLQ6ZW33 695 aa12.6□□□□□ -0.39
ITGA1-203ENST00000504669 MYCBPQ99417 103 aaPredicted RBP12.6□□□□□ -0.39
ITGA1-203ENST00000504669 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
ITGA1-203ENST00000504669 TSPY26PQ9H489 355 aa12.59□□□□□ -0.39
ITGA1-203ENST00000504669 CREBRFQ8IUR6 639 aa12.59□□□□□ -0.39
ITGA1-203ENST00000504669 CCAR1Q8IX12 1150 aaKnown RBP12.59□□□□□ -0.39
ITGA1-203ENST00000504669 ISY1Q9ULR0 285 aaKnown RBP12.58□□□□□ -0.4
ITGA1-203ENST00000504669 MYO15BQ96JP2 1530 aa12.58□□□□□ -0.4
ITGA1-203ENST00000504669 SEPT14Q6ZU15 432 aa12.57□□□□□ -0.4
ITGA1-203ENST00000504669 CENPQQ7L2Z9 268 aaPredicted RBP12.57□□□□□ -0.4
ITGA1-203ENST00000504669 ANKRD20A12PQ8NF67 263 aa12.57□□□□□ -0.4
ITGA1-203ENST00000504669 TCHPQ9BT92 498 aa12.57□□□□□ -0.4
ITGA1-203ENST00000504669 RASSF4Q9H2L5 321 aa12.57□□□□□ -0.4
ITGA1-203ENST00000504669 RBM33Q96EV2 1170 aaKnown RBP12.56□□□□□ -0.4
ITGA1-203ENST00000504669 ERLIN1O75477 346 aa12.56□□□□□ -0.4
ITGA1-203ENST00000504669 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
ITGA1-203ENST00000504669 CCDC146Q8IYE0 955 aa12.55□□□□□ -0.4
ITGA1-203ENST00000504669 RASSF8Q8NHQ8 419 aa12.55□□□□□ -0.4
ITGA1-203ENST00000504669 CAGE1Q8TC20 777 aa12.55□□□□□ -0.4
ITGA1-203ENST00000504669 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
ITGA1-203ENST00000504669 NOL8Q76FK4 1167 aaKnown RBP12.55□□□□□ -0.4
ITGA1-203ENST00000504669 A0A1B0GUL7 405 aa12.54□□□□□ -0.4
ITGA1-203ENST00000504669 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
ITGA1-203ENST00000504669 DRC1Q96MC2 740 aa12.54□□□□□ -0.4
ITGA1-203ENST00000504669 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
ITGA1-203ENST00000504669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.54□□□□□ -0.4
ITGA1-203ENST00000504669 CEP89Q96ST8 783 aa12.54□□□□□ -0.4
ITGA1-203ENST00000504669 SEPT6Q14141 434 aa12.53□□□□□ -0.4
ITGA1-203ENST00000504669 ATP6V1DQ9Y5K8 247 aa12.53□□□□□ -0.4
ITGA1-203ENST00000504669 CCDC102AQ96A19 550 aa12.53□□□□□ -0.4
ITGA1-203ENST00000504669 POLR3GO15318 223 aaPredicted RBP12.53□□□□□ -0.4
ITGA1-203ENST00000504669 KIF20AO95235 890 aa12.53□□□□□ -0.4
ITGA1-203ENST00000504669 CHMP3Q9Y3E7 222 aa12.53□□□□□ -0.4
ITGA1-203ENST00000504669 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
ITGA1-203ENST00000504669 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
ITGA1-203ENST00000504669 RNF168Q8IYW5 571 aaPredicted RBP12.52□□□□□ -0.4
ITGA1-203ENST00000504669 TMCO3Q6UWJ1 677 aa12.52□□□□□ -0.4
ITGA1-203ENST00000504669 MIPOL1Q8TD10 442 aa12.52□□□□□ -0.41
ITGA1-203ENST00000504669 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.52□□□□□ -0.41
ITGA1-203ENST00000504669 SPATA24Q86W54 205 aa12.52□□□□□ -0.41
ITGA1-203ENST00000504669 NUP133Q8WUM0 1156 aa12.52□□□□□ -0.41
ITGA1-203ENST00000504669 LRRCC1Q9C099 1032 aa12.52□□□□□ -0.41
ITGA1-203ENST00000504669 NEBLO76041 1014 aa12.51□□□□□ -0.41
ITGA1-203ENST00000504669 GBP6Q6ZN66 633 aa12.51□□□□□ -0.41
ITGA1-203ENST00000504669 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
ITGA1-203ENST00000504669 RPAINQ86UA6 219 aa12.51□□□□□ -0.41
ITGA1-203ENST00000504669 RNF214Q8ND24 703 aa12.51□□□□□ -0.41
ITGA1-203ENST00000504669 IVLP07476 585 aa12.51□□□□□ -0.41
ITGA1-203ENST00000504669 AP1ARQ63HQ0 302 aa12.5□□□□□ -0.41
ITGA1-203ENST00000504669 RNF187Q5TA31 235 aaPredicted RBP12.5□□□□□ -0.41
ITGA1-203ENST00000504669 FOXD4L6Q3SYB3 417 aaPredicted RBP12.5□□□□□ -0.41
ITGA1-203ENST00000504669 FOXD4L3Q6VB84 417 aaPredicted RBP12.5□□□□□ -0.41
ITGA1-203ENST00000504669 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
ITGA1-203ENST00000504669 PRM3Q9NNZ6 103 aa12.5□□□□□ -0.41
ITGA1-203ENST00000504669 CLCN1P35523 988 aa12.49□□□□□ -0.41
ITGA1-203ENST00000504669 ZNHIT6Q9NWK9 470 aaKnown RBP12.49□□□□□ -0.41
ITGA1-203ENST00000504669 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
ITGA1-203ENST00000504669 SOX12O15370 315 aa12.49□□□□□ -0.41
ITGA1-203ENST00000504669 SPC24Q8NBT2 197 aa12.49□□□□□ -0.41
ITGA1-203ENST00000504669 NUCB2P80303 420 aa12.48□□□□□ -0.41
ITGA1-203ENST00000504669 KTN1Q86UP2 1357 aaKnown RBP12.48□□□□□ -0.41
ITGA1-203ENST00000504669 RABEP1Q15276 862 aa12.48□□□□□ -0.41
ITGA1-203ENST00000504669 KRT222Q8N1A0 295 aa12.48□□□□□ -0.41
ITGA1-203ENST00000504669 XPCQ01831 940 aaPredicted RBP12.47□□□□□ -0.41
ITGA1-203ENST00000504669 C10orf67Q8IYJ2 551 aa12.47□□□□□ -0.41
ITGA1-203ENST00000504669 IPO7O95373 1038 aaKnown RBP12.47□□□□□ -0.41
ITGA1-203ENST00000504669 MICALL1Q8N3F8 863 aa12.47□□□□□ -0.41
ITGA1-203ENST00000504669 LMAN1P49257 510 aa12.47□□□□□ -0.41
ITGA1-203ENST00000504669 CFAP53Q96M91 514 aa12.47□□□□□ -0.41
ITGA1-203ENST00000504669 FAM114A1Q8IWE2 563 aa12.47□□□□□ -0.41
ITGA1-203ENST00000504669 GOLGA6L9A6NEM1 432 aa12.46□□□□□ -0.42
ITGA1-203ENST00000504669 EZRP15311 586 aaKnown RBP12.45□□□□□ -0.42
ITGA1-203ENST00000504669 NEUROD2Q15784 382 aa12.45□□□□□ -0.42
ITGA1-203ENST00000504669 FMNL3Q8IVF7 1028 aa12.45□□□□□ -0.42
ITGA1-203ENST00000504669 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
ITGA1-203ENST00000504669 RSRC1Q96IZ7 334 aaKnown RBP12.44□□□□□ -0.42
ITGA1-203ENST00000504669 NAA25Q14CX7 972 aa12.44□□□□□ -0.42
ITGA1-203ENST00000504669 CCDC97Q96F63 343 aaPredicted RBP12.44□□□□□ -0.42
ITGA1-203ENST00000504669 TRIM5Q9C035 493 aa12.44□□□□□ -0.42
ITGA1-203ENST00000504669 DAAM2Q86T65 1068 aa12.44□□□□□ -0.42
ITGA1-203ENST00000504669 LUZP1Q86V48 1076 aa12.43□□□□□ -0.42
ITGA1-203ENST00000504669 H3BQV1 296 aa12.43□□□□□ -0.42
ITGA1-203ENST00000504669 IFFO2Q5TF58 517 aa12.43□□□□□ -0.42
ITGA1-203ENST00000504669 EXOC6Q8TAG9 804 aa12.43□□□□□ -0.42
ITGA1-203ENST00000504669 MAP2K2P36507 400 aa12.43□□□□□ -0.42
ITGA1-203ENST00000504669 A0A1B0GUA9 196 aa12.42□□□□□ -0.42
ITGA1-203ENST00000504669 FYB1O15117 783 aa12.42□□□□□ -0.42
ITGA1-203ENST00000504669 ITPRIPQ8IWB1 547 aa12.42□□□□□ -0.42
ITGA1-203ENST00000504669 PRIMPOLQ96LW4 560 aa12.42□□□□□ -0.42
ITGA1-203ENST00000504669 BMS1Q14692 1282 aaKnown RBP12.42□□□□□ -0.42
ITGA1-203ENST00000504669 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
ITGA1-203ENST00000504669 ZMAT2Q96NC0 199 aaKnown RBP12.42□□□□□ -0.42
ITGA1-203ENST00000504669 PDILTQ8N807 584 aa12.42□□□□□ -0.42
ITGA1-203ENST00000504669 HMGB1P1B2RPK0 211 aaPredicted RBP12.42□□□□□ -0.42
ITGA1-203ENST00000504669 KIF2AO00139 706 aaPredicted RBP12.42□□□□□ -0.42
ITGA1-203ENST00000504669 CFAP45Q9UL16 551 aa12.42□□□□□ -0.42
ITGA1-203ENST00000504669 RRP1P56182 461 aaKnown RBP12.41□□□□□ -0.42
ITGA1-203ENST00000504669 PCMTD1Q96MG8 357 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms