RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ZNF853P0CG23 659 aa7.68□□□□□ -1.18
CLCN3-204ENST00000504131 KIAA1211Q6ZU35 1233 aa7.68□□□□□ -1.18
CLCN3-204ENST00000504131 SEMA3FQ13275 785 aa7.68□□□□□ -1.18
CLCN3-204ENST00000504131 ANKRD13AQ8IZ07 590 aa7.67□□□□□ -1.18
CLCN3-204ENST00000504131 TPD52L2O43399 206 aaKnown RBP7.67□□□□□ -1.18
CLCN3-204ENST00000504131 CTR9Q6PD62 1173 aa7.67□□□□□ -1.18
CLCN3-204ENST00000504131 CALR3Q96L12 384 aaKnown RBP7.67□□□□□ -1.18
CLCN3-204ENST00000504131 TSPY4P0CV99 314 aa7.67□□□□□ -1.18
CLCN3-204ENST00000504131 TSPY10P0CW01 314 aa7.67□□□□□ -1.18
CLCN3-204ENST00000504131 APBB1IPQ7Z5R6 666 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-204ENST00000504131 DNAI2Q9GZS0 605 aa7.67□□□□□ -1.18
CLCN3-204ENST00000504131 CBX1P83916 185 aa7.67□□□□□ -1.18
CLCN3-204ENST00000504131 CT47A1Q5JQC4 288 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-204ENST00000504131 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.66□□□□□ -1.18
CLCN3-204ENST00000504131 MAP2K1Q02750 393 aaPredicted RBP7.66□□□□□ -1.18
CLCN3-204ENST00000504131 TOMM22Q9NS69 142 aa7.66□□□□□ -1.18
CLCN3-204ENST00000504131 FAM160A1Q05DH4 1040 aa7.66□□□□□ -1.18
CLCN3-204ENST00000504131 TEX35Q5T0J7 233 aa7.66□□□□□ -1.18
CLCN3-204ENST00000504131 CCDC175P0C221 793 aa7.66□□□□□ -1.18
CLCN3-204ENST00000504131 NBPF20Q3BBV1 942 aa7.66□□□□□ -1.18
CLCN3-204ENST00000504131 NBPF9Q3BBW0 867 aa7.66□□□□□ -1.18
CLCN3-204ENST00000504131 TMC1Q8TDI8 760 aa7.66□□□□□ -1.18
CLCN3-204ENST00000504131 CEP89Q96ST8 783 aa7.66□□□□□ -1.18
CLCN3-204ENST00000504131 KNSTRNQ9Y448 316 aa7.66□□□□□ -1.18
CLCN3-204ENST00000504131 NPHP1O15259 732 aa7.65□□□□□ -1.18
CLCN3-204ENST00000504131 STK10O94804 968 aaKnown RBP7.65□□□□□ -1.18
CLCN3-204ENST00000504131 RGL3Q3MIN7 710 aa7.65□□□□□ -1.18
CLCN3-204ENST00000504131 GOPCQ9HD26 462 aa7.65□□□□□ -1.18
CLCN3-204ENST00000504131 TRERF1Q96PN7 1200 aa7.65□□□□□ -1.18
CLCN3-204ENST00000504131 NUCKS1Q9H1E3 243 aaKnown RBP7.65□□□□□ -1.18
CLCN3-204ENST00000504131 SATB1Q01826 763 aa7.65□□□□□ -1.18
CLCN3-204ENST00000504131 BIRC2Q13490 618 aa7.65□□□□□ -1.18
CLCN3-204ENST00000504131 GET4Q7L5D6 327 aaPredicted RBP7.65□□□□□ -1.18
CLCN3-204ENST00000504131 DYDC1Q8WWB3 177 aa7.65□□□□□ -1.18
CLCN3-204ENST00000504131 CCDC91Q7Z6B0 441 aa7.65□□□□□ -1.19
CLCN3-204ENST00000504131 SPINK5Q9NQ38 1064 aaPredicted RBP7.65□□□□□ -1.19
CLCN3-204ENST00000504131 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.19
CLCN3-204ENST00000504131 GOLGA6L19H0YKK7 550 aa7.65□□□□□ -1.19
CLCN3-204ENST00000504131 TAX1BP1Q86VP1 789 aa7.65□□□□□ -1.19
CLCN3-204ENST00000504131 INF2Q27J81 1249 aa7.64□□□□□ -1.19
CLCN3-204ENST00000504131 CHMP4CQ96CF2 233 aa7.64□□□□□ -1.19
CLCN3-204ENST00000504131 SLC26A8Q96RN1 970 aa7.64□□□□□ -1.19
CLCN3-204ENST00000504131 ZBTB9Q96C00 473 aa7.64□□□□□ -1.19
CLCN3-204ENST00000504131 PRDM2Q13029 1718 aa7.63□□□□□ -1.19
CLCN3-204ENST00000504131 C11orf95C9JLR9 678 aaPredicted RBP7.63□□□□□ -1.19
CLCN3-204ENST00000504131 ZRANB2O95218 330 aaKnown RBP eCLIP7.63□□□□□ -1.191e-6■■■■■ 42
CLCN3-204ENST00000504131 LOC102724159A0A0B4J2E5 919 aa7.63□□□□□ -1.19
CLCN3-204ENST00000504131 PWP2Q15269 919 aaKnown RBP7.63□□□□□ -1.19
CLCN3-204ENST00000504131 SMC4Q9NTJ3 1288 aa7.63□□□□□ -1.19
CLCN3-204ENST00000504131 UQCRHLA0A096LP55 91 aa7.62□□□□□ -1.19
CLCN3-204ENST00000504131 IPO8O15397 1037 aaKnown RBP7.62□□□□□ -1.19
CLCN3-204ENST00000504131 UQCRHP07919 91 aa7.62□□□□□ -1.19
CLCN3-204ENST00000504131 PNMA2Q9UL42 364 aa7.62□□□□□ -1.19
CLCN3-204ENST00000504131 ZNF280DQ6N043 979 aa7.62□□□□□ -1.19
CLCN3-204ENST00000504131 CEP83Q9Y592 693 aa7.62□□□□□ -1.19
CLCN3-204ENST00000504131 IPO7O95373 1038 aaKnown RBP7.62□□□□□ -1.19
CLCN3-204ENST00000504131 CXorf38Q8TB03 319 aa7.62□□□□□ -1.19
CLCN3-204ENST00000504131 SWAP70Q9UH65 585 aa7.62□□□□□ -1.19
CLCN3-204ENST00000504131 UTP14CQ5TAP6 766 aaKnown RBP7.61□□□□□ -1.19
CLCN3-204ENST00000504131 ANAPC4Q9UJX5 808 aa7.61□□□□□ -1.19
CLCN3-204ENST00000504131 BAZ1AQ9NRL2 1556 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-204ENST00000504131 GOLGA6CA6NDK9 693 aa7.61□□□□□ -1.19
CLCN3-204ENST00000504131 GOLGA6BA6NDN3 693 aa7.61□□□□□ -1.19
CLCN3-204ENST00000504131 GOLGA6DP0CG33 693 aa7.61□□□□□ -1.19
CLCN3-204ENST00000504131 SEPT14Q6ZU15 432 aa7.61□□□□□ -1.19
CLCN3-204ENST00000504131 GOLGA6AQ9NYA3 693 aa7.61□□□□□ -1.19
CLCN3-204ENST00000504131 CTDP1Q9Y5B0 961 aaPredicted RBP7.61□□□□□ -1.19
CLCN3-204ENST00000504131 USP8P40818 1118 aa7.61□□□□□ -1.19
CLCN3-204ENST00000504131 AP1ARQ63HQ0 302 aa7.61□□□□□ -1.19
CLCN3-204ENST00000504131 SMARCA4P51532 1647 aa7.61□□□□□ -1.19
CLCN3-204ENST00000504131 PROCA1Q8NCQ7 364 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-204ENST00000504131 BAZ1BQ9UIG0 1483 aaKnown RBP7.6□□□□□ -1.19
CLCN3-204ENST00000504131 CCDC172P0C7W6 258 aa7.6□□□□□ -1.19
CLCN3-204ENST00000504131 CHMP7Q8WUX9 453 aaPredicted RBP7.6□□□□□ -1.19
CLCN3-204ENST00000504131 BRD1O95696 1058 aa7.59□□□□□ -1.19
CLCN3-204ENST00000504131 DMTNQ08495 405 aa7.59□□□□□ -1.19
CLCN3-204ENST00000504131 TRIM29Q14134 588 aa7.59□□□□□ -1.19
CLCN3-204ENST00000504131 TERF1P54274 439 aa7.59□□□□□ -1.19
CLCN3-204ENST00000504131 IRAK4Q9NWZ3 460 aa7.59□□□□□ -1.19
CLCN3-204ENST00000504131 CASQ1P31415 396 aa7.59□□□□□ -1.19
CLCN3-204ENST00000504131 SLMAPQ14BN4 828 aa7.59□□□□□ -1.2
CLCN3-204ENST00000504131 ZFYVE27Q5T4F4 411 aa7.59□□□□□ -1.2
CLCN3-204ENST00000504131 NGEFQ8N5V2 710 aa7.59□□□□□ -1.2
CLCN3-204ENST00000504131 TRIM52Q96A61 297 aa7.59□□□□□ -1.2
CLCN3-204ENST00000504131 SRPK2P78362 688 aaKnown RBP7.58□□□□□ -1.2
CLCN3-204ENST00000504131 SMARCA2P51531 1590 aa7.58□□□□□ -1.2
CLCN3-204ENST00000504131 PPP2R5AQ15172 486 aa7.58□□□□□ -1.2
CLCN3-204ENST00000504131 ESF1Q9H501 851 aaKnown RBP7.58□□□□□ -1.2
CLCN3-204ENST00000504131 TRHP20396 242 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-204ENST00000504131 CENPJQ9HC77 1338 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-204ENST00000504131 CCDC82Q8N4S0 544 aa7.58□□□□□ -1.2
CLCN3-204ENST00000504131 MORC4Q8TE76 937 aa7.58□□□□□ -1.2
CLCN3-204ENST00000504131 CECR2Q9BXF3 1484 aa7.58□□□□□ -1.2
CLCN3-204ENST00000504131 OTUD6BQ8N6M0 293 aa7.57□□□□□ -1.2
CLCN3-204ENST00000504131 PAK3O75914 559 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-204ENST00000504131 FOXD4Q12950 439 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-204ENST00000504131 ZKSCAN2Q63HK3 967 aa7.57□□□□□ -1.2
CLCN3-204ENST00000504131 CCDC94Q9BW85 323 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-204ENST00000504131 METTL14Q9HCE5 456 aaKnown RBP7.57□□□□□ -1.2
CLCN3-204ENST00000504131 PDS5BQ9NTI5 1447 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms