RNA–Protein interactions for RNA: ENST00000504099.5

SLF1-206, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 4

Gene SLF1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-206ENST00000504099 HSPA2P54652 639 aa12.18□□□□□ -0.46
SLF1-206ENST00000504099 CLIP1P30622 1438 aa12.18□□□□□ -0.46
SLF1-206ENST00000504099 FAM205CA6NFA0 338 aa12.17□□□□□ -0.46
SLF1-206ENST00000504099 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
SLF1-206ENST00000504099 PKD2Q13563 968 aa12.17□□□□□ -0.46
SLF1-206ENST00000504099 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
SLF1-206ENST00000504099 CDC42BPAQ5VT25 1732 aa12.17□□□□□ -0.46
SLF1-206ENST00000504099 EFCAB2Q5VUJ9 269 aa12.16□□□□□ -0.46
SLF1-206ENST00000504099 REREQ9P2R6 1566 aa12.16□□□□□ -0.46
SLF1-206ENST00000504099 RGL2O15211 777 aa12.15□□□□□ -0.46
SLF1-206ENST00000504099 C3P01024 1663 aa12.15□□□□□ -0.46
SLF1-206ENST00000504099 ABCC1P33527 1531 aa12.15□□□□□ -0.46
SLF1-206ENST00000504099 HOXB3P14651 431 aaPredicted RBP12.14□□□□□ -0.47
SLF1-206ENST00000504099 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
SLF1-206ENST00000504099 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
SLF1-206ENST00000504099 KIDINS220Q9ULH0 1771 aa12.13□□□□□ -0.47
SLF1-206ENST00000504099 SETD1BQ9UPS6 1966 aaKnown RBP12.13□□□□□ -0.47
SLF1-206ENST00000504099 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
SLF1-206ENST00000504099 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
SLF1-206ENST00000504099 MLH3Q9UHC1 1453 aa12.11□□□□□ -0.47
SLF1-206ENST00000504099 AFAP1Q8N556 730 aa12.11□□□□□ -0.47
SLF1-206ENST00000504099 FBXO22Q8NEZ5 403 aa12.1□□□□□ -0.47
SLF1-206ENST00000504099 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
SLF1-206ENST00000504099 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
SLF1-206ENST00000504099 TMEM92Q6UXU6 159 aa12.09□□□□□ -0.47
SLF1-206ENST00000504099 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
SLF1-206ENST00000504099 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
SLF1-206ENST00000504099 AGLP35573 1532 aa12.09□□□□□ -0.47
SLF1-206ENST00000504099 TRAPPC8Q9Y2L5 1435 aa12.09□□□□□ -0.47
SLF1-206ENST00000504099 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
SLF1-206ENST00000504099 UHRF1BP1Q6BDS2 1440 aa12.08□□□□□ -0.48
SLF1-206ENST00000504099 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
SLF1-206ENST00000504099 ERBB3P21860 1342 aa12.08□□□□□ -0.48
SLF1-206ENST00000504099 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
SLF1-206ENST00000504099 SYCP2Q9BX26 1530 aa12.06□□□□□ -0.48
SLF1-206ENST00000504099 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
SLF1-206ENST00000504099 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
SLF1-206ENST00000504099 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
SLF1-206ENST00000504099 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
SLF1-206ENST00000504099 SPNS2Q8IVW8 549 aa12.03□□□□□ -0.48
SLF1-206ENST00000504099 INO80Q9ULG1 1556 aaPredicted RBP12.03□□□□□ -0.48
SLF1-206ENST00000504099 CLTCQ00610 1675 aaKnown RBP12.03□□□□□ -0.48
SLF1-206ENST00000504099 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
SLF1-206ENST00000504099 ATP7AQ04656 1500 aa12.01□□□□□ -0.49
SLF1-206ENST00000504099 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
SLF1-206ENST00000504099 GPATCH8Q9UKJ3 1502 aaKnown RBP12.01□□□□□ -0.49
SLF1-206ENST00000504099 PLXNC1O60486 1568 aa12.01□□□□□ -0.49
SLF1-206ENST00000504099 ZNF142P52746 1687 aaPredicted RBP12□□□□□ -0.49
SLF1-206ENST00000504099 ESF1Q9H501 851 aaKnown RBP12□□□□□ -0.49
SLF1-206ENST00000504099 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
SLF1-206ENST00000504099 ADGBQ8N7X0 1667 aa12□□□□□ -0.49
SLF1-206ENST00000504099 MMRN1Q13201 1228 aa11.99□□□□□ -0.49
SLF1-206ENST00000504099 PTPRTO14522 1441 aa11.98□□□□□ -0.49
SLF1-206ENST00000504099 ZNF777Q9ULD5 760 aaPredicted RBP11.98□□□□□ -0.49
SLF1-206ENST00000504099 CAMSAP1Q5T5Y3 1602 aa11.97□□□□□ -0.49
SLF1-206ENST00000504099 TIAM1Q13009 1591 aa11.97□□□□□ -0.49
SLF1-206ENST00000504099 NCOA1Q15788 1441 aa11.97□□□□□ -0.49
SLF1-206ENST00000504099 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
SLF1-206ENST00000504099 LTBP4Q8N2S1 1624 aa11.97□□□□□ -0.49
SLF1-206ENST00000504099 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.49
SLF1-206ENST00000504099 SPAG9O60271 1321 aaKnown RBP11.96□□□□□ -0.49
SLF1-206ENST00000504099 NPATQ14207 1427 aa11.95□□□□□ -0.5
SLF1-206ENST00000504099 KIAA1107Q9UPP5 1409 aa11.95□□□□□ -0.5
SLF1-206ENST00000504099 HNRNPMP52272 730 aaKnown RBP eCLIP11.95□□□□□ -0.5
SLF1-206ENST00000504099 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
SLF1-206ENST00000504099 KRTAP3-3Q9BYR6 98 aa11.95□□□□□ -0.5
SLF1-206ENST00000504099 KRTAP3-2Q9BYR7 98 aa11.95□□□□□ -0.5
SLF1-206ENST00000504099 EHBP1L1Q8N3D4 1523 aa11.95□□□□□ -0.5
SLF1-206ENST00000504099 A2MP01023 1474 aa11.95□□□□□ -0.5
SLF1-206ENST00000504099 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
SLF1-206ENST00000504099 C2orf72A6NCS6 295 aa11.94□□□□□ -0.5
SLF1-206ENST00000504099 ARSIQ5FYB1 569 aa11.94□□□□□ -0.5
SLF1-206ENST00000504099 GPR153Q6NV75 609 aa11.94□□□□□ -0.5
SLF1-206ENST00000504099 MTUS2Q5JR59 1369 aa11.93□□□□□ -0.5
SLF1-206ENST00000504099 CEP170BQ9Y4F5 1589 aaPredicted RBP11.93□□□□□ -0.5
SLF1-206ENST00000504099 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
SLF1-206ENST00000504099 IQSEC2Q5JU85 1478 aa11.92□□□□□ -0.5
SLF1-206ENST00000504099 CFDP1Q9UEE9 299 aaPredicted RBP11.92□□□□□ -0.5
SLF1-206ENST00000504099 SPATA31D1Q6ZQQ2 1576 aa11.92□□□□□ -0.5
SLF1-206ENST00000504099 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
SLF1-206ENST00000504099 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
SLF1-206ENST00000504099 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
SLF1-206ENST00000504099 PLA2R1Q13018 1463 aa11.89□□□□□ -0.51
SLF1-206ENST00000504099 PTPRKQ15262 1439 aa11.89□□□□□ -0.51
SLF1-206ENST00000504099 MBD5Q9P267 1494 aa11.89□□□□□ -0.51
SLF1-206ENST00000504099 KIF3CO14782 793 aa11.88□□□□□ -0.51
SLF1-206ENST00000504099 PPP1R37O75864 691 aa11.88□□□□□ -0.51
SLF1-206ENST00000504099 DNMT1P26358 1616 aaKnown RBP11.88□□□□□ -0.51
SLF1-206ENST00000504099 DISP3Q9P2K9 1392 aa11.88□□□□□ -0.51
SLF1-206ENST00000504099 TCOF1Q13428 1488 aaKnown RBP11.88□□□□□ -0.51
SLF1-206ENST00000504099 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
SLF1-206ENST00000504099 CEP162Q5TB80 1403 aa11.87□□□□□ -0.51
SLF1-206ENST00000504099 GGT6Q6P531 493 aa11.87□□□□□ -0.51
SLF1-206ENST00000504099 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.51
SLF1-206ENST00000504099 ZNF687Q8N1G0 1237 aa11.86□□□□□ -0.51
SLF1-206ENST00000504099 CAMSAP2Q08AD1 1489 aa11.86□□□□□ -0.51
SLF1-206ENST00000504099 RTEL1-TNFRSF6BF6WH68 1400 aa11.86□□□□□ -0.51
SLF1-206ENST00000504099 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
SLF1-206ENST00000504099 CCDC141Q6ZP82 1450 aa11.85□□□□□ -0.51
SLF1-206ENST00000504099 KDM5DQ9BY66 1539 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms