RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 HECW2Q9P2P5 1572 aa13.03□□□□□ -0.32
KDM3B-202ENST00000504095 CDAN1Q8IWY9 1227 aa13.02□□□□□ -0.33
KDM3B-202ENST00000504095 ARHGEF40Q8TER5 1519 aa13.02□□□□□ -0.33
KDM3B-202ENST00000504095 KIDINS220Q9ULH0 1771 aa13.02□□□□□ -0.33
KDM3B-202ENST00000504095 MARVELD3Q96A59 401 aa13.01□□□□□ -0.33
KDM3B-202ENST00000504095 ZFYVE16Q7Z3T8 1539 aa13.01□□□□□ -0.33
KDM3B-202ENST00000504095 ARHGEF5Q12774 1597 aa13□□□□□ -0.33
KDM3B-202ENST00000504095 TCOF1Q13428 1488 aaKnown RBP13□□□□□ -0.33
KDM3B-202ENST00000504095 MAGI2Q86UL8 1455 aa13□□□□□ -0.33
KDM3B-202ENST00000504095 YEATS2Q9ULM3 1422 aa13□□□□□ -0.33
KDM3B-202ENST00000504095 ECM2O94769 699 aaPredicted RBP13□□□□□ -0.33
KDM3B-202ENST00000504095 INO80Q9ULG1 1556 aaPredicted RBP12.99□□□□□ -0.33
KDM3B-202ENST00000504095 MLH3Q9UHC1 1453 aa12.99□□□□□ -0.33
KDM3B-202ENST00000504095 ABCA6Q8N139 1617 aa12.99□□□□□ -0.33
KDM3B-202ENST00000504095 CCDC141Q6ZP82 1450 aa12.98□□□□□ -0.33
KDM3B-202ENST00000504095 SIGLEC1Q9BZZ2 1709 aa12.98□□□□□ -0.33
KDM3B-202ENST00000504095 DIP2CQ9Y2E4 1556 aa12.98□□□□□ -0.33
KDM3B-202ENST00000504095 CROCC2H7BZ55 1655 aa12.97□□□□□ -0.33
KDM3B-202ENST00000504095 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
KDM3B-202ENST00000504095 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
KDM3B-202ENST00000504095 ATP7AQ04656 1500 aa12.97□□□□□ -0.33
KDM3B-202ENST00000504095 DNMT1P26358 1616 aaKnown RBP12.95□□□□□ -0.34
KDM3B-202ENST00000504095 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
KDM3B-202ENST00000504095 RSPH4AQ5TD94 716 aa12.95□□□□□ -0.34
KDM3B-202ENST00000504095 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
KDM3B-202ENST00000504095 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
KDM3B-202ENST00000504095 ADGBQ8N7X0 1667 aa12.94□□□□□ -0.34
KDM3B-202ENST00000504095 ATP10AO60312 1499 aa12.94□□□□□ -0.34
KDM3B-202ENST00000504095 SOX12O15370 315 aa12.94□□□□□ -0.34
KDM3B-202ENST00000504095 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
KDM3B-202ENST00000504095 MAST1Q9Y2H9 1570 aa12.94□□□□□ -0.34
KDM3B-202ENST00000504095 MS4A4AQ96JQ5 239 aa12.93□□□□□ -0.34
KDM3B-202ENST00000504095 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
KDM3B-202ENST00000504095 ABCC5O15440 1437 aa12.93□□□□□ -0.34
KDM3B-202ENST00000504095 C9orf84Q5VXU9 1444 aa12.93□□□□□ -0.34
KDM3B-202ENST00000504095 DAPK1P53355 1430 aa12.92□□□□□ -0.34
KDM3B-202ENST00000504095 FAM50AQ14320 339 aaKnown RBP12.92□□□□□ -0.34
KDM3B-202ENST00000504095 REREQ9P2R6 1566 aa12.92□□□□□ -0.34
KDM3B-202ENST00000504095 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
KDM3B-202ENST00000504095 MICALL2Q8IY33 904 aa12.91□□□□□ -0.34
KDM3B-202ENST00000504095 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
KDM3B-202ENST00000504095 BCORL1Q5H9F3 1711 aa12.91□□□□□ -0.34
KDM3B-202ENST00000504095 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
KDM3B-202ENST00000504095 TSPY4P0CV99 314 aa12.9□□□□□ -0.34
KDM3B-202ENST00000504095 TSPY10P0CW01 314 aa12.9□□□□□ -0.34
KDM3B-202ENST00000504095 EMP3P54852 163 aa12.9□□□□□ -0.34
KDM3B-202ENST00000504095 PKD2Q13563 968 aa12.9□□□□□ -0.34
KDM3B-202ENST00000504095 STK25O00506 426 aa12.89□□□□□ -0.35
KDM3B-202ENST00000504095 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
KDM3B-202ENST00000504095 RGL2O15211 777 aa12.88□□□□□ -0.35
KDM3B-202ENST00000504095 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.88□□□□□ -0.35
KDM3B-202ENST00000504095 A2MP01023 1474 aa12.88□□□□□ -0.35
KDM3B-202ENST00000504095 ARID4BQ4LE39 1312 aaPredicted RBP12.88□□□□□ -0.35
KDM3B-202ENST00000504095 ADAMTSL3P82987 1691 aa12.87□□□□□ -0.35
KDM3B-202ENST00000504095 AGLP35573 1532 aa12.87□□□□□ -0.35
KDM3B-202ENST00000504095 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
KDM3B-202ENST00000504095 KDM4FA0A1W2PPD8 638 aa12.85□□□□□ -0.35
KDM3B-202ENST00000504095 CHIC2Q9UKJ5 165 aa12.85□□□□□ -0.35
KDM3B-202ENST00000504095 HOXB3P14651 431 aaPredicted RBP12.84□□□□□ -0.35
KDM3B-202ENST00000504095 NLRP6P59044 892 aa12.84□□□□□ -0.35
KDM3B-202ENST00000504095 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
KDM3B-202ENST00000504095 ADGRL2O95490 1459 aa12.84□□□□□ -0.35
KDM3B-202ENST00000504095 MADDQ8WXG6 1647 aa12.84□□□□□ -0.35
KDM3B-202ENST00000504095 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
KDM3B-202ENST00000504095 DHX29Q7Z478 1369 aaKnown RBP12.83□□□□□ -0.36
KDM3B-202ENST00000504095 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
KDM3B-202ENST00000504095 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.36
KDM3B-202ENST00000504095 KIF15Q9NS87 1388 aa12.82□□□□□ -0.36
KDM3B-202ENST00000504095 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
KDM3B-202ENST00000504095 FAM205CA6NFA0 338 aa12.82□□□□□ -0.36
KDM3B-202ENST00000504095 MLECQ14165 292 aa12.82□□□□□ -0.36
KDM3B-202ENST00000504095 RIMS1Q86UR5 1692 aaKnown RBP12.82□□□□□ -0.36
KDM3B-202ENST00000504095 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
KDM3B-202ENST00000504095 ITGAEP38570 1179 aa12.81□□□□□ -0.36
KDM3B-202ENST00000504095 RRP7BPQ9NSQ0 103 aa12.81□□□□□ -0.36
KDM3B-202ENST00000504095 EIF2AK4Q9P2K8 1649 aaKnown RBP12.8□□□□□ -0.36
KDM3B-202ENST00000504095 FBXO22Q8NEZ5 403 aa12.8□□□□□ -0.36
KDM3B-202ENST00000504095 MFRPQ9BY79 579 aa12.8□□□□□ -0.36
KDM3B-202ENST00000504095 DOK7Q18PE1 504 aa12.79□□□□□ -0.36
KDM3B-202ENST00000504095 RNF17Q9BXT8 1623 aaKnown RBP12.79□□□□□ -0.36
KDM3B-202ENST00000504095 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
KDM3B-202ENST00000504095 ROCK1Q13464 1354 aa12.78□□□□□ -0.36
KDM3B-202ENST00000504095 ERBINQ96RT1 1412 aa12.78□□□□□ -0.36
KDM3B-202ENST00000504095 POTEB3A0JP26 581 aa12.77□□□□□ -0.37
KDM3B-202ENST00000504095 KIF3BO15066 747 aa12.77□□□□□ -0.37
KDM3B-202ENST00000504095 POTEBQ6S5H4 581 aa12.77□□□□□ -0.37
KDM3B-202ENST00000504095 MROH1Q8NDA8 1641 aa12.77□□□□□ -0.37
KDM3B-202ENST00000504095 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.37
KDM3B-202ENST00000504095 GGT6Q6P531 493 aa12.76□□□□□ -0.37
KDM3B-202ENST00000504095 DEPDC5O75140 1603 aa12.75□□□□□ -0.37
KDM3B-202ENST00000504095 PTPRMP28827 1452 aa12.75□□□□□ -0.37
KDM3B-202ENST00000504095 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
KDM3B-202ENST00000504095 MROH2AA6NES4 1674 aa12.74□□□□□ -0.37
KDM3B-202ENST00000504095 C3P01024 1663 aa12.73□□□□□ -0.37
KDM3B-202ENST00000504095 ANKRD50Q9ULJ7 1429 aa12.73□□□□□ -0.37
KDM3B-202ENST00000504095 CEP152O94986 1710 aa12.73□□□□□ -0.37
KDM3B-202ENST00000504095 PRDM15P57071 1507 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-202ENST00000504095 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
KDM3B-202ENST00000504095 HOXB1P14653 301 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-202ENST00000504095 KDM5DQ9BY66 1539 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms