RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 A2MP01023 1474 aa13.55□□□□□ -0.24
ARHGEF28-206ENST00000504003 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
ARHGEF28-206ENST00000504003 ATP10AO60312 1499 aa13.54□□□□□ -0.24
ARHGEF28-206ENST00000504003 CCER1Q8TC90 406 aaPredicted RBP13.53□□□□□ -0.24
ARHGEF28-206ENST00000504003 KANK1Q14678 1352 aa13.53□□□□□ -0.24
ARHGEF28-206ENST00000504003 ABCA6Q8N139 1617 aa13.53□□□□□ -0.24
ARHGEF28-206ENST00000504003 DIP2CQ9Y2E4 1556 aa13.52□□□□□ -0.25
ARHGEF28-206ENST00000504003 COL17A1Q9UMD9 1497 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF28-206ENST00000504003 SEC24BO95487 1268 aa13.51□□□□□ -0.25
ARHGEF28-206ENST00000504003 REREQ9P2R6 1566 aa13.5□□□□□ -0.25
ARHGEF28-206ENST00000504003 ARHGEF40Q8TER5 1519 aa13.5□□□□□ -0.25
ARHGEF28-206ENST00000504003 KIF3BO15066 747 aa13.5□□□□□ -0.25
ARHGEF28-206ENST00000504003 YEATS2Q9ULM3 1422 aa13.48□□□□□ -0.25
ARHGEF28-206ENST00000504003 NUP155O75694 1391 aa13.48□□□□□ -0.25
ARHGEF28-206ENST00000504003 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
ARHGEF28-206ENST00000504003 UNC13BO14795 1591 aa13.48□□□□□ -0.25
ARHGEF28-206ENST00000504003 BCORL1Q5H9F3 1711 aa13.47□□□□□ -0.25
ARHGEF28-206ENST00000504003 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
ARHGEF28-206ENST00000504003 IER5LQ5T953 404 aa13.47□□□□□ -0.25
ARHGEF28-206ENST00000504003 IFNL1Q8IU54 200 aa13.47□□□□□ -0.25
ARHGEF28-206ENST00000504003 TRIM35Q9UPQ4 493 aa13.47□□□□□ -0.25
ARHGEF28-206ENST00000504003 AGLP35573 1532 aa13.45□□□□□ -0.26
ARHGEF28-206ENST00000504003 KDM5DQ9BY66 1539 aa13.45□□□□□ -0.26
ARHGEF28-206ENST00000504003 POTEJP0CG39 1038 aa13.45□□□□□ -0.26
ARHGEF28-206ENST00000504003 ESF1Q9H501 851 aaKnown RBP13.45□□□□□ -0.26
ARHGEF28-206ENST00000504003 DEPDC5O75140 1603 aa13.45□□□□□ -0.26
ARHGEF28-206ENST00000504003 ARID4BQ4LE39 1312 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF28-206ENST00000504003 RNF17Q9BXT8 1623 aaKnown RBP13.44□□□□□ -0.26
ARHGEF28-206ENST00000504003 KDM4FA0A1W2PPD8 638 aa13.44□□□□□ -0.26
ARHGEF28-206ENST00000504003 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
ARHGEF28-206ENST00000504003 IQGAP3Q86VI3 1631 aa13.43□□□□□ -0.26
ARHGEF28-206ENST00000504003 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF28-206ENST00000504003 GGT6Q6P531 493 aa13.43□□□□□ -0.26
ARHGEF28-206ENST00000504003 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
ARHGEF28-206ENST00000504003 DHX57Q6P158 1386 aaKnown RBP13.43□□□□□ -0.26
ARHGEF28-206ENST00000504003 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF28-206ENST00000504003 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
ARHGEF28-206ENST00000504003 PRDM15P57071 1507 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF28-206ENST00000504003 FAM135AQ9P2D6 1515 aa13.42□□□□□ -0.26
ARHGEF28-206ENST00000504003 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
ARHGEF28-206ENST00000504003 ZC3H13Q5T200 1668 aaKnown RBP13.41□□□□□ -0.26
ARHGEF28-206ENST00000504003 POTEFA5A3E0 1075 aa13.41□□□□□ -0.26
ARHGEF28-206ENST00000504003 PYGBP11216 843 aa13.39□□□□□ -0.27
ARHGEF28-206ENST00000504003 TET3O43151 1660 aa13.38□□□□□ -0.27
ARHGEF28-206ENST00000504003 PZPP20742 1482 aa13.38□□□□□ -0.27
ARHGEF28-206ENST00000504003 POTEMA6NI47 508 aa13.38□□□□□ -0.27
ARHGEF28-206ENST00000504003 PKD2Q13563 968 aa13.38□□□□□ -0.27
ARHGEF28-206ENST00000504003 GSE1Q14687 1217 aa13.37□□□□□ -0.27
ARHGEF28-206ENST00000504003 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
ARHGEF28-206ENST00000504003 LMTK2Q8IWU2 1503 aa13.36□□□□□ -0.27
ARHGEF28-206ENST00000504003 VWDEQ8N2E2 1590 aa13.36□□□□□ -0.27
ARHGEF28-206ENST00000504003 MROH1Q8NDA8 1641 aa13.35□□□□□ -0.27
ARHGEF28-206ENST00000504003 MLECQ14165 292 aa13.35□□□□□ -0.27
ARHGEF28-206ENST00000504003 RPRD2Q5VT52 1461 aaKnown RBP13.35□□□□□ -0.27
ARHGEF28-206ENST00000504003 CEP152O94986 1710 aa13.34□□□□□ -0.27
ARHGEF28-206ENST00000504003 CNTLNQ9NXG0 1405 aa13.34□□□□□ -0.27
ARHGEF28-206ENST00000504003 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
ARHGEF28-206ENST00000504003 PLCG2P16885 1265 aa13.33□□□□□ -0.28
ARHGEF28-206ENST00000504003 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.28
ARHGEF28-206ENST00000504003 ABCC3O15438 1527 aa13.33□□□□□ -0.28
ARHGEF28-206ENST00000504003 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
ARHGEF28-206ENST00000504003 CAMSAP1Q5T5Y3 1602 aa13.32□□□□□ -0.28
ARHGEF28-206ENST00000504003 TIMELESSQ9UNS1 1208 aa13.31□□□□□ -0.28
ARHGEF28-206ENST00000504003 E9PCH4 1651 aa13.31□□□□□ -0.28
ARHGEF28-206ENST00000504003 CLTCQ00610 1675 aaKnown RBP13.31□□□□□ -0.28
ARHGEF28-206ENST00000504003 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
ARHGEF28-206ENST00000504003 NEUROD1Q13562 356 aa13.29□□□□□ -0.28
ARHGEF28-206ENST00000504003 SPHKAPQ2M3C7 1700 aa13.29□□□□□ -0.28
ARHGEF28-206ENST00000504003 SIGLEC1Q9BZZ2 1709 aa13.29□□□□□ -0.28
ARHGEF28-206ENST00000504003 ANKRD30BQ9BXX2 1392 aa13.29□□□□□ -0.28
ARHGEF28-206ENST00000504003 CCDC144AA2RUR9 1427 aa13.29□□□□□ -0.28
ARHGEF28-206ENST00000504003 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
ARHGEF28-206ENST00000504003 FER1L4A9Z1Z3 1794 aa13.28□□□□□ -0.28
ARHGEF28-206ENST00000504003 ZNF467Q7Z7K2 595 aaPredicted RBP13.28□□□□□ -0.28
ARHGEF28-206ENST00000504003 PCDHB8Q9UN66 801 aa13.27□□□□□ -0.29
ARHGEF28-206ENST00000504003 TONSLQ96HA7 1378 aa13.27□□□□□ -0.29
ARHGEF28-206ENST00000504003 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
ARHGEF28-206ENST00000504003 TRPM2O94759 1503 aa13.25□□□□□ -0.29
ARHGEF28-206ENST00000504003 NPATQ14207 1427 aa13.25□□□□□ -0.29
ARHGEF28-206ENST00000504003 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
ARHGEF28-206ENST00000504003 PCDH10Q9P2E7 1040 aa13.25□□□□□ -0.29
ARHGEF28-206ENST00000504003 PTPRTO14522 1441 aa13.24□□□□□ -0.29
ARHGEF28-206ENST00000504003 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
ARHGEF28-206ENST00000504003 SLC52A1Q9NWF4 448 aa13.24□□□□□ -0.29
ARHGEF28-206ENST00000504003 CFAP65Q6ZU64 1925 aaKnown RBP13.23□□□□□ -0.29
ARHGEF28-206ENST00000504003 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
ARHGEF28-206ENST00000504003 PREX1Q8TCU6 1659 aa13.22□□□□□ -0.29
ARHGEF28-206ENST00000504003 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
ARHGEF28-206ENST00000504003 KIF1BO60333 1816 aa13.22□□□□□ -0.29
ARHGEF28-206ENST00000504003 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
ARHGEF28-206ENST00000504003 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.3
ARHGEF28-206ENST00000504003 NOS1P29475 1434 aa13.21□□□□□ -0.3
ARHGEF28-206ENST00000504003 CHRM1P11229 460 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF28-206ENST00000504003 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
ARHGEF28-206ENST00000504003 ERVK-7P63135 1459 aa13.2□□□□□ -0.3
ARHGEF28-206ENST00000504003 MADDQ8WXG6 1647 aa13.2□□□□□ -0.3
ARHGEF28-206ENST00000504003 RIMS1Q86UR5 1692 aaKnown RBP13.19□□□□□ -0.3
ARHGEF28-206ENST00000504003 SLAIN1Q8ND83 568 aa13.19□□□□□ -0.3
ARHGEF28-206ENST00000504003 SPATA31D1Q6ZQQ2 1576 aa13.19□□□□□ -0.3
ARHGEF28-206ENST00000504003 C3P01024 1663 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms