RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 DHX57Q6P158 1386 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-207ENST00000503974 TRPM2O94759 1503 aa13.31□□□□□ -0.28
PDLIM5-207ENST00000503974 RTN4Q9NQC3 1192 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-207ENST00000503974 PIK3C2BO00750 1634 aa13.3□□□□□ -0.28
PDLIM5-207ENST00000503974 PKD2Q13563 968 aa13.3□□□□□ -0.28
PDLIM5-207ENST00000503974 PLA2R1Q13018 1463 aa13.29□□□□□ -0.28
PDLIM5-207ENST00000503974 VSIG10Q8N0Z9 540 aa13.29□□□□□ -0.28
PDLIM5-207ENST00000503974 ZNF316A6NFI3 1004 aaPredicted RBP13.28□□□□□ -0.28
PDLIM5-207ENST00000503974 MYO3AQ8NEV4 1616 aa13.28□□□□□ -0.28
PDLIM5-207ENST00000503974 CEBPAP49715 358 aaPredicted RBP13.27□□□□□ -0.28
PDLIM5-207ENST00000503974 CFAP65Q6ZU64 1925 aaKnown RBP13.27□□□□□ -0.28
PDLIM5-207ENST00000503974 ZNF142P52746 1687 aaPredicted RBP13.27□□□□□ -0.29
PDLIM5-207ENST00000503974 FBXO31Q5XUX0 539 aaPredicted RBP13.27□□□□□ -0.29
PDLIM5-207ENST00000503974 SETD1BQ9UPS6 1966 aaKnown RBP13.26□□□□□ -0.29
PDLIM5-207ENST00000503974 TNRQ92752 1358 aa13.26□□□□□ -0.29
PDLIM5-207ENST00000503974 ANKRD30BQ9BXX2 1392 aa13.26□□□□□ -0.29
PDLIM5-207ENST00000503974 CLTCL1P53675 1640 aa13.26□□□□□ -0.29
PDLIM5-207ENST00000503974 NLRP1Q9C000 1473 aa13.25□□□□□ -0.29
PDLIM5-207ENST00000503974 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
PDLIM5-207ENST00000503974 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
PDLIM5-207ENST00000503974 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
PDLIM5-207ENST00000503974 FOXD1Q16676 465 aa13.24□□□□□ -0.29
PDLIM5-207ENST00000503974 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
PDLIM5-207ENST00000503974 CEP170BQ9Y4F5 1589 aaPredicted RBP13.22□□□□□ -0.29
PDLIM5-207ENST00000503974 A2ML1A8K2U0 1454 aa13.21□□□□□ -0.29
PDLIM5-207ENST00000503974 ADGRB3O60242 1522 aa13.21□□□□□ -0.29
PDLIM5-207ENST00000503974 UBR1Q8IWV7 1749 aa13.21□□□□□ -0.29
PDLIM5-207ENST00000503974 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.29
PDLIM5-207ENST00000503974 CCDC144AA2RUR9 1427 aa13.21□□□□□ -0.3
PDLIM5-207ENST00000503974 TMEM131LA2VDJ0 1609 aa13.21□□□□□ -0.3
PDLIM5-207ENST00000503974 KIF1BO60333 1816 aa13.2□□□□□ -0.3
PDLIM5-207ENST00000503974 UHRF1BP1Q6BDS2 1440 aa13.19□□□□□ -0.3
PDLIM5-207ENST00000503974 IDI1Q13907 227 aa13.18□□□□□ -0.3
PDLIM5-207ENST00000503974 LMTK3Q96Q04 1460 aa13.18□□□□□ -0.3
PDLIM5-207ENST00000503974 SPATA31E1Q6ZUB1 1445 aa13.17□□□□□ -0.3
PDLIM5-207ENST00000503974 MYO5BQ9ULV0 1848 aa13.17□□□□□ -0.3
PDLIM5-207ENST00000503974 PLPPR3Q6T4P5 718 aa13.17□□□□□ -0.3
PDLIM5-207ENST00000503974 SLIT1O75093 1534 aa13.15□□□□□ -0.3
PDLIM5-207ENST00000503974 ARHGAP23Q9P227 1491 aa13.15□□□□□ -0.31
PDLIM5-207ENST00000503974 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
PDLIM5-207ENST00000503974 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-207ENST00000503974 C11orf95C9JLR9 678 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-207ENST00000503974 NEXMIFQ5QGS0 1516 aa13.12□□□□□ -0.31
PDLIM5-207ENST00000503974 ZFYVE9O95405 1425 aa13.12□□□□□ -0.31
PDLIM5-207ENST00000503974 PPLO60437 1756 aa13.12□□□□□ -0.31
PDLIM5-207ENST00000503974 TMEM2Q9UHN6 1383 aa13.1□□□□□ -0.31
PDLIM5-207ENST00000503974 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
PDLIM5-207ENST00000503974 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-207ENST00000503974 HOMEZQ8IX15 550 aa13.09□□□□□ -0.31
PDLIM5-207ENST00000503974 THEMISQ8N1K5 641 aaPredicted RBP13.09□□□□□ -0.31
PDLIM5-207ENST00000503974 RPGRIP1LQ68CZ1 1315 aa13.08□□□□□ -0.32
PDLIM5-207ENST00000503974 MYOM2P54296 1465 aa13.08□□□□□ -0.32
PDLIM5-207ENST00000503974 RIMS2Q9UQ26 1411 aa13.07□□□□□ -0.32
PDLIM5-207ENST00000503974 STAG3Q9UJ98 1225 aa13.07□□□□□ -0.32
PDLIM5-207ENST00000503974 BCANQ96GW7 911 aa13.06□□□□□ -0.32
PDLIM5-207ENST00000503974 NRXN1Q9ULB1 1477 aa13.06□□□□□ -0.32
PDLIM5-207ENST00000503974 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-207ENST00000503974 STRCQ7RTU9 1775 aa13.06□□□□□ -0.32
PDLIM5-207ENST00000503974 MED14O60244 1454 aa13.06□□□□□ -0.32
PDLIM5-207ENST00000503974 SCAF11Q99590 1463 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-207ENST00000503974 NRXN3Q9Y4C0 1643 aa13.04□□□□□ -0.32
PDLIM5-207ENST00000503974 NBR1Q14596 966 aa13.03□□□□□ -0.32
PDLIM5-207ENST00000503974 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
PDLIM5-207ENST00000503974 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
PDLIM5-207ENST00000503974 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.03□□□□□ -0.32
PDLIM5-207ENST00000503974 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
PDLIM5-207ENST00000503974 LTKP29376 864 aa13.02□□□□□ -0.33
PDLIM5-207ENST00000503974 HSPA2P54652 639 aa13.02□□□□□ -0.33
PDLIM5-207ENST00000503974 RGL3Q3MIN7 710 aa13.02□□□□□ -0.33
PDLIM5-207ENST00000503974 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-207ENST00000503974 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-207ENST00000503974 TONSLQ96HA7 1378 aa13.02□□□□□ -0.33
PDLIM5-207ENST00000503974 PLEKHG1Q9ULL1 1385 aa13.02□□□□□ -0.33
PDLIM5-207ENST00000503974 BRD2P25440 801 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-207ENST00000503974 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
PDLIM5-207ENST00000503974 PIK3C2GO75747 1445 aa13.01□□□□□ -0.33
PDLIM5-207ENST00000503974 IQGAP1P46940 1657 aa13.01□□□□□ -0.33
PDLIM5-207ENST00000503974 SETD1AO15047 1707 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-207ENST00000503974 HDGFP51858 240 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-207ENST00000503974 ANKLE2Q86XL3 938 aa13□□□□□ -0.33
PDLIM5-207ENST00000503974 LAMC1P11047 1609 aa13□□□□□ -0.33
PDLIM5-207ENST00000503974 DIP2AQ14689 1571 aa13□□□□□ -0.33
PDLIM5-207ENST00000503974 FKBP8Q14318 412 aa13□□□□□ -0.33
PDLIM5-207ENST00000503974 TXNDC2Q86VQ3 553 aa13□□□□□ -0.33
PDLIM5-207ENST00000503974 EID1Q9Y6B2 187 aa13□□□□□ -0.33
PDLIM5-207ENST00000503974 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
PDLIM5-207ENST00000503974 NPHP4O75161 1426 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-207ENST00000503974 PRAG1Q86YV5 1406 aa12.99□□□□□ -0.33
PDLIM5-207ENST00000503974 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-207ENST00000503974 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
PDLIM5-207ENST00000503974 DHX37Q8IY37 1157 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-207ENST00000503974 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
PDLIM5-207ENST00000503974 ADGRF5Q8IZF2 1346 aa12.98□□□□□ -0.33
PDLIM5-207ENST00000503974 RTL5Q5HYW3 569 aaPredicted RBP12.98□□□□□ -0.33
PDLIM5-207ENST00000503974 DCAF11Q8TEB1 546 aa12.98□□□□□ -0.33
PDLIM5-207ENST00000503974 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-207ENST00000503974 NCKAP5LQ9HCH0 1330 aa12.97□□□□□ -0.33
PDLIM5-207ENST00000503974 TRPM1Q7Z4N2 1603 aa12.96□□□□□ -0.33
PDLIM5-207ENST00000503974 ALKQ9UM73 1620 aa12.96□□□□□ -0.33
PDLIM5-207ENST00000503974 PPP1R15AO75807 674 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms