RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 ERBINQ96RT1 1412 aa16.37■□□□□ 0.21
CDK11A-222ENST00000498810 CHIC2Q9UKJ5 165 aa16.37■□□□□ 0.21
CDK11A-222ENST00000498810 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
CDK11A-222ENST00000498810 PPARGC1BQ86YN6 1023 aaKnown RBP16.36■□□□□ 0.21
CDK11A-222ENST00000498810 RRP7BPQ9NSQ0 103 aa16.36■□□□□ 0.21
CDK11A-222ENST00000498810 PTPRKQ15262 1439 aa16.36■□□□□ 0.21
CDK11A-222ENST00000498810 PZPP20742 1482 aa16.35■□□□□ 0.21
CDK11A-222ENST00000498810 STRCQ7RTU9 1775 aa16.35■□□□□ 0.21
CDK11A-222ENST00000498810 ABCC3O15438 1527 aa16.35■□□□□ 0.21
CDK11A-222ENST00000498810 PRDM15P57071 1507 aaPredicted RBP16.34■□□□□ 0.21
CDK11A-222ENST00000498810 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
CDK11A-222ENST00000498810 DEPDC5O75140 1603 aa16.33■□□□□ 0.2
CDK11A-222ENST00000498810 KANK1Q14678 1352 aa16.32■□□□□ 0.2
CDK11A-222ENST00000498810 TNRQ92752 1358 aa16.31■□□□□ 0.2
CDK11A-222ENST00000498810 POLR1AO95602 1720 aaPredicted RBP16.31■□□□□ 0.2
CDK11A-222ENST00000498810 ADGRL2O95490 1459 aa16.3■□□□□ 0.2
CDK11A-222ENST00000498810 DCBLD2Q96PD2 775 aa16.3■□□□□ 0.2
CDK11A-222ENST00000498810 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
CDK11A-222ENST00000498810 ITGAEP38570 1179 aa16.28■□□□□ 0.2
CDK11A-222ENST00000498810 KIF12Q96FN5 646 aa16.28■□□□□ 0.2
CDK11A-222ENST00000498810 NCOA1Q15788 1441 aa16.28■□□□□ 0.2
CDK11A-222ENST00000498810 MS4A3Q96HJ5 214 aa16.27■□□□□ 0.2
CDK11A-222ENST00000498810 NLRP1Q9C000 1473 aa16.25■□□□□ 0.19
CDK11A-222ENST00000498810 FBXO31Q5XUX0 539 aaPredicted RBP16.25■□□□□ 0.19
CDK11A-222ENST00000498810 SPATA31D1Q6ZQQ2 1576 aa16.25■□□□□ 0.19
CDK11A-222ENST00000498810 ERVK-7P63135 1459 aa16.24■□□□□ 0.19
CDK11A-222ENST00000498810 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
CDK11A-222ENST00000498810 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
CDK11A-222ENST00000498810 UGGT1Q9NYU2 1555 aa16.24■□□□□ 0.19
CDK11A-222ENST00000498810 GCC2Q8IWJ2 1684 aa16.21■□□□□ 0.19
CDK11A-222ENST00000498810 PTPRTO14522 1441 aa16.21■□□□□ 0.19
CDK11A-222ENST00000498810 FAM212AQ96EL1 285 aa16.21■□□□□ 0.19
CDK11A-222ENST00000498810 UNC13BO14795 1591 aa16.21■□□□□ 0.18
CDK11A-222ENST00000498810 EFCAB6Q5THR3 1501 aa16.2■□□□□ 0.18
CDK11A-222ENST00000498810 TET3O43151 1660 aa16.2■□□□□ 0.18
CDK11A-222ENST00000498810 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
CDK11A-222ENST00000498810 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
CDK11A-222ENST00000498810 PKD2Q13563 968 aa16.19■□□□□ 0.18
CDK11A-222ENST00000498810 ILDR1Q86SU0 546 aaPredicted RBP16.19■□□□□ 0.18
CDK11A-222ENST00000498810 UBR1Q8IWV7 1749 aa16.19■□□□□ 0.18
CDK11A-222ENST00000498810 VWDEQ8N2E2 1590 aa16.18■□□□□ 0.18
CDK11A-222ENST00000498810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDK11A-222ENST00000498810 MAP3K13O43283 966 aa16.18■□□□□ 0.18
CDK11A-222ENST00000498810 KLHL34Q8N239 644 aa16.18■□□□□ 0.18
CDK11A-222ENST00000498810 LMTK2Q8IWU2 1503 aa16.18■□□□□ 0.18
CDK11A-222ENST00000498810 ARHGAP31Q2M1Z3 1444 aa16.18■□□□□ 0.18
CDK11A-222ENST00000498810 PIK3C2BO00750 1634 aa16.16■□□□□ 0.18
CDK11A-222ENST00000498810 THEMISQ8N1K5 641 aaPredicted RBP16.16■□□□□ 0.18
CDK11A-222ENST00000498810 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
CDK11A-222ENST00000498810 IFNLR1Q8IU57 520 aaPredicted RBP16.15■□□□□ 0.18
CDK11A-222ENST00000498810 IQGAP3Q86VI3 1631 aa16.15■□□□□ 0.18
CDK11A-222ENST00000498810 IQGAP1P46940 1657 aa16.14■□□□□ 0.18
CDK11A-222ENST00000498810 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
CDK11A-222ENST00000498810 CERKQ8TCT0 537 aa16.13■□□□□ 0.17
CDK11A-222ENST00000498810 FBXO41Q8TF61 875 aa16.13■□□□□ 0.17
CDK11A-222ENST00000498810 ANKLE2Q86XL3 938 aa16.12■□□□□ 0.17
CDK11A-222ENST00000498810 KDM5AP29375 1690 aaKnown RBP16.11■□□□□ 0.17
CDK11A-222ENST00000498810 RPRD2Q5VT52 1461 aaKnown RBP16.11■□□□□ 0.17
CDK11A-222ENST00000498810 ASTLQ6HA08 431 aaPredicted RBP16.11■□□□□ 0.17
CDK11A-222ENST00000498810 SYNMO15061 1565 aa16.11■□□□□ 0.17
CDK11A-222ENST00000498810 E9PCH4 1651 aa16.11■□□□□ 0.17
CDK11A-222ENST00000498810 DCAF8Q5TAQ9 597 aa16.1■□□□□ 0.17
CDK11A-222ENST00000498810 SGIP1Q9BQI5 828 aa16.1■□□□□ 0.17
CDK11A-222ENST00000498810 MYO5BQ9ULV0 1848 aa16.09■□□□□ 0.17
CDK11A-222ENST00000498810 NPHP4O75161 1426 aaPredicted RBP16.09■□□□□ 0.17
CDK11A-222ENST00000498810 ADGRB3O60242 1522 aa16.09■□□□□ 0.17
CDK11A-222ENST00000498810 ATMINO43313 823 aaPredicted RBP16.08■□□□□ 0.16
CDK11A-222ENST00000498810 LHX8Q68G74 356 aa16.08■□□□□ 0.16
CDK11A-222ENST00000498810 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
CDK11A-222ENST00000498810 TRPC6Q9Y210 931 aa16.07■□□□□ 0.16
CDK11A-222ENST00000498810 NUP155O75694 1391 aa16.07■□□□□ 0.16
CDK11A-222ENST00000498810 SCAF11Q99590 1463 aaKnown RBP16.07■□□□□ 0.16
CDK11A-222ENST00000498810 LTBP4Q8N2S1 1624 aa16.07■□□□□ 0.16
CDK11A-222ENST00000498810 SPHKAPQ2M3C7 1700 aa16.06■□□□□ 0.16
CDK11A-222ENST00000498810 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
CDK11A-222ENST00000498810 EID1Q9Y6B2 187 aa16.06■□□□□ 0.16
CDK11A-222ENST00000498810 SLIT1O75093 1534 aa16.04■□□□□ 0.16
CDK11A-222ENST00000498810 NOS1P29475 1434 aa16.04■□□□□ 0.16
CDK11A-222ENST00000498810 PCDHB13Q9Y5F0 798 aa16.04■□□□□ 0.16
CDK11A-222ENST00000498810 MED14O60244 1454 aa16.03■□□□□ 0.16
CDK11A-222ENST00000498810 IQSEC2Q5JU85 1478 aa16.03■□□□□ 0.16
CDK11A-222ENST00000498810 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
CDK11A-222ENST00000498810 SPOCK2Q92563 424 aa16.02■□□□□ 0.16
CDK11A-222ENST00000498810 CPS1P31327 1500 aa16.02■□□□□ 0.15
CDK11A-222ENST00000498810 TIE1P35590 1138 aa16.01■□□□□ 0.15
CDK11A-222ENST00000498810 GSE1Q14687 1217 aa16.01■□□□□ 0.15
CDK11A-222ENST00000498810 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
CDK11A-222ENST00000498810 SLC52A1Q9NWF4 448 aa16.01■□□□□ 0.15
CDK11A-222ENST00000498810 ARHGAP23Q9P227 1491 aa16.01■□□□□ 0.15
CDK11A-222ENST00000498810 NAIPQ13075 1403 aa16.01■□□□□ 0.15
CDK11A-222ENST00000498810 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
CDK11A-222ENST00000498810 BCANQ96GW7 911 aa16■□□□□ 0.15
CDK11A-222ENST00000498810 HFM1A2PYH4 1435 aa16■□□□□ 0.15
CDK11A-222ENST00000498810 TMEM2Q9UHN6 1383 aa16■□□□□ 0.15
CDK11A-222ENST00000498810 IDI1Q13907 227 aa15.99■□□□□ 0.15
CDK11A-222ENST00000498810 IFNL1Q8IU54 200 aa15.99■□□□□ 0.15
CDK11A-222ENST00000498810 TRIM52Q96A61 297 aa15.99■□□□□ 0.15
CDK11A-222ENST00000498810 TMEM131LA2VDJ0 1609 aa15.98■□□□□ 0.15
CDK11A-222ENST00000498810 PPP1R15AO75807 674 aaPredicted RBP15.98■□□□□ 0.15
CDK11A-222ENST00000498810 PYGBP11216 843 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms