RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 KIAA1210Q9ULL0 1709 aa11.75□□□□□ -0.53
SPIRE1-211ENST00000498803 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
SPIRE1-211ENST00000498803 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
SPIRE1-211ENST00000498803 ST20-MTHFSA0A0A6YYL1 179 aa11.74□□□□□ -0.53
SPIRE1-211ENST00000498803 NBPF1Q3BBV0 1214 aa11.74□□□□□ -0.53
SPIRE1-211ENST00000498803 SCAF11Q99590 1463 aaKnown RBP11.74□□□□□ -0.53
SPIRE1-211ENST00000498803 MROH2AA6NES4 1674 aa11.74□□□□□ -0.53
SPIRE1-211ENST00000498803 ADGRF5Q8IZF2 1346 aa11.73□□□□□ -0.53
SPIRE1-211ENST00000498803 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPIRE1-211ENST00000498803 TNRQ92752 1358 aa11.73□□□□□ -0.53
SPIRE1-211ENST00000498803 CFAP65Q6ZU64 1925 aaKnown RBP11.72□□□□□ -0.53
SPIRE1-211ENST00000498803 IFT172Q9UG01 1749 aa11.72□□□□□ -0.53
SPIRE1-211ENST00000498803 PIK3C2GO75747 1445 aa11.72□□□□□ -0.53
SPIRE1-211ENST00000498803 ANP32CO43423 234 aa11.72□□□□□ -0.53
SPIRE1-211ENST00000498803 CDCA8Q53HL2 280 aa11.72□□□□□ -0.53
SPIRE1-211ENST00000498803 MIER1Q8N108 512 aa11.72□□□□□ -0.53
SPIRE1-211ENST00000498803 C14orf93Q9H972 538 aaKnown RBP11.72□□□□□ -0.53
SPIRE1-211ENST00000498803 KIF7Q2M1P5 1343 aa11.71□□□□□ -0.53
SPIRE1-211ENST00000498803 TMF1P82094 1093 aa11.71□□□□□ -0.53
SPIRE1-211ENST00000498803 TMEM131LA2VDJ0 1609 aa11.71□□□□□ -0.54
SPIRE1-211ENST00000498803 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.54
SPIRE1-211ENST00000498803 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
SPIRE1-211ENST00000498803 NLRP1Q9C000 1473 aa11.7□□□□□ -0.54
SPIRE1-211ENST00000498803 PPLO60437 1756 aa11.7□□□□□ -0.54
SPIRE1-211ENST00000498803 CFAP70Q5T0N1 1121 aa11.7□□□□□ -0.54
SPIRE1-211ENST00000498803 A2ML1A8K2U0 1454 aa11.69□□□□□ -0.54
SPIRE1-211ENST00000498803 C11orf95C9JLR9 678 aaPredicted RBP11.68□□□□□ -0.54
SPIRE1-211ENST00000498803 POLR1AO95602 1720 aaPredicted RBP11.68□□□□□ -0.54
SPIRE1-211ENST00000498803 KDM5AP29375 1690 aaKnown RBP11.68□□□□□ -0.54
SPIRE1-211ENST00000498803 TESK2Q96S53 571 aa11.66□□□□□ -0.54
SPIRE1-211ENST00000498803 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
SPIRE1-211ENST00000498803 SBNO2Q9Y2G9 1366 aa11.66□□□□□ -0.54
SPIRE1-211ENST00000498803 IQGAP1P46940 1657 aa11.65□□□□□ -0.54
SPIRE1-211ENST00000498803 CCER2I3L3R5 266 aa11.65□□□□□ -0.54
SPIRE1-211ENST00000498803 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
SPIRE1-211ENST00000498803 CENPJQ9HC77 1338 aaPredicted RBP11.63□□□□□ -0.55
SPIRE1-211ENST00000498803 THEMISQ8N1K5 641 aaPredicted RBP11.63□□□□□ -0.55
SPIRE1-211ENST00000498803 POLR3GLQ9BT43 218 aa11.63□□□□□ -0.55
SPIRE1-211ENST00000498803 TMEM2Q9UHN6 1383 aa11.63□□□□□ -0.55
SPIRE1-211ENST00000498803 ADGRB1O14514 1584 aa11.62□□□□□ -0.55
SPIRE1-211ENST00000498803 PUS7Q96PZ0 661 aaKnown RBP11.62□□□□□ -0.55
SPIRE1-211ENST00000498803 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
SPIRE1-211ENST00000498803 CEBPAP49715 358 aaPredicted RBP11.61□□□□□ -0.55
SPIRE1-211ENST00000498803 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
SPIRE1-211ENST00000498803 C3P01024 1663 aa11.61□□□□□ -0.55
SPIRE1-211ENST00000498803 NUTM2DQ5VT03 806 aaPredicted RBP11.6□□□□□ -0.55
SPIRE1-211ENST00000498803 TRAK1Q9UPV9 953 aa11.6□□□□□ -0.55
SPIRE1-211ENST00000498803 MYO3AQ8NEV4 1616 aa11.6□□□□□ -0.55
SPIRE1-211ENST00000498803 DISP3Q9P2K9 1392 aa11.59□□□□□ -0.55
SPIRE1-211ENST00000498803 MYO5BQ9ULV0 1848 aa11.58□□□□□ -0.56
SPIRE1-211ENST00000498803 TMEM132EQ6IEE7 984 aa11.58□□□□□ -0.56
SPIRE1-211ENST00000498803 ADAMTSL3P82987 1691 aa11.58□□□□□ -0.56
SPIRE1-211ENST00000498803 UBR1Q8IWV7 1749 aa11.57□□□□□ -0.56
SPIRE1-211ENST00000498803 ALKQ9UM73 1620 aa11.57□□□□□ -0.56
SPIRE1-211ENST00000498803 LRPPRCP42704 1394 aaKnown RBP11.57□□□□□ -0.56
SPIRE1-211ENST00000498803 PLEKHG1Q9ULL1 1385 aa11.57□□□□□ -0.56
SPIRE1-211ENST00000498803 CENPBP07199 599 aaPredicted RBP11.57□□□□□ -0.56
SPIRE1-211ENST00000498803 SIRT1Q96EB6 747 aa11.57□□□□□ -0.56
SPIRE1-211ENST00000498803 PRKRIP1Q9H875 184 aaPredicted RBP11.57□□□□□ -0.56
SPIRE1-211ENST00000498803 YTHDC2Q9H6S0 1430 aaKnown RBP11.57□□□□□ -0.56
SPIRE1-211ENST00000498803 ABCC11Q96J66 1382 aa11.56□□□□□ -0.56
SPIRE1-211ENST00000498803 SLIT1O75093 1534 aa11.56□□□□□ -0.56
SPIRE1-211ENST00000498803 TXNDC2Q86VQ3 553 aa11.56□□□□□ -0.56
SPIRE1-211ENST00000498803 BCANQ96GW7 911 aa11.56□□□□□ -0.56
SPIRE1-211ENST00000498803 ARHGAP23Q9P227 1491 aa11.56□□□□□ -0.56
SPIRE1-211ENST00000498803 EVC2Q86UK5 1308 aa11.56□□□□□ -0.56
SPIRE1-211ENST00000498803 DLC1Q96QB1 1528 aa11.55□□□□□ -0.56
SPIRE1-211ENST00000498803 RALBP1Q15311 655 aa11.55□□□□□ -0.56
SPIRE1-211ENST00000498803 POGKQ9P215 609 aa11.55□□□□□ -0.56
SPIRE1-211ENST00000498803 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
SPIRE1-211ENST00000498803 PLPPR3Q6T4P5 718 aa11.53□□□□□ -0.56
SPIRE1-211ENST00000498803 STK26Q9P289 416 aa11.53□□□□□ -0.56
SPIRE1-211ENST00000498803 TBX22Q9Y458 520 aa11.53□□□□□ -0.56
SPIRE1-211ENST00000498803 SETD1BQ9UPS6 1966 aaKnown RBP11.53□□□□□ -0.56
SPIRE1-211ENST00000498803 ASXL1Q8IXJ9 1541 aa11.53□□□□□ -0.56
SPIRE1-211ENST00000498803 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
SPIRE1-211ENST00000498803 PANK3Q9H999 370 aa11.52□□□□□ -0.57
SPIRE1-211ENST00000498803 KNSTRNQ9Y448 316 aa11.52□□□□□ -0.57
SPIRE1-211ENST00000498803 CEP170BQ9Y4F5 1589 aaPredicted RBP11.52□□□□□ -0.57
SPIRE1-211ENST00000498803 TECPR2O15040 1411 aa11.52□□□□□ -0.57
SPIRE1-211ENST00000498803 FAM135BQ49AJ0 1406 aa11.52□□□□□ -0.57
SPIRE1-211ENST00000498803 PER1O15534 1290 aaPredicted RBP11.51□□□□□ -0.57
SPIRE1-211ENST00000498803 LTKP29376 864 aa11.51□□□□□ -0.57
SPIRE1-211ENST00000498803 ANKLE2Q86XL3 938 aa11.51□□□□□ -0.57
SPIRE1-211ENST00000498803 PRAM1Q96QH2 718 aa11.51□□□□□ -0.57
SPIRE1-211ENST00000498803 PTPRMP28827 1452 aa11.51□□□□□ -0.57
SPIRE1-211ENST00000498803 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
SPIRE1-211ENST00000498803 QRICH2Q9H0J4 1663 aa11.5□□□□□ -0.57
SPIRE1-211ENST00000498803 ARHGEF28Q8N1W1 1705 aaKnown RBP11.5□□□□□ -0.57
SPIRE1-211ENST00000498803 ATAD2Q6PL18 1390 aa11.5□□□□□ -0.57
SPIRE1-211ENST00000498803 PIK3R4Q99570 1358 aa11.5□□□□□ -0.57
SPIRE1-211ENST00000498803 NPC1L1Q9UHC9 1359 aa11.5□□□□□ -0.57
SPIRE1-211ENST00000498803 METP08581 1390 aa11.49□□□□□ -0.57
SPIRE1-211ENST00000498803 ADAMTS13Q76LX8 1427 aa11.49□□□□□ -0.57
SPIRE1-211ENST00000498803 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
SPIRE1-211ENST00000498803 MED14O60244 1454 aa11.48□□□□□ -0.57
SPIRE1-211ENST00000498803 ZNF142P52746 1687 aaPredicted RBP11.48□□□□□ -0.57
SPIRE1-211ENST00000498803 SETD1AO15047 1707 aaKnown RBP11.47□□□□□ -0.57
SPIRE1-211ENST00000498803 MYBBP1AQ9BQG0 1328 aaKnown RBP11.47□□□□□ -0.57
SPIRE1-211ENST00000498803 SRPK2P78362 688 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms