RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 ARHGAP23Q9P227 1491 aa14.75□□□□□ -0.05
PTPN3-206ENST00000497739 EIF2AK4Q9P2K8 1649 aaKnown RBP14.74□□□□□ -0.05
PTPN3-206ENST00000497739 UBR1Q8IWV7 1749 aa14.73□□□□□ -0.05
PTPN3-206ENST00000497739 SCAF11Q99590 1463 aaKnown RBP14.73□□□□□ -0.05
PTPN3-206ENST00000497739 SLIT1O75093 1534 aa14.72□□□□□ -0.05
PTPN3-206ENST00000497739 XIRP1Q702N8 1843 aaKnown RBP14.69□□□□□ -0.06
PTPN3-206ENST00000497739 MYOM3Q5VTT5 1437 aa14.69□□□□□ -0.06
PTPN3-206ENST00000497739 LTKP29376 864 aa14.69□□□□□ -0.06
PTPN3-206ENST00000497739 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
PTPN3-206ENST00000497739 PRDM15P57071 1507 aaPredicted RBP14.68□□□□□ -0.06
PTPN3-206ENST00000497739 ARHGAP31Q2M1Z3 1444 aa14.67□□□□□ -0.06
PTPN3-206ENST00000497739 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
PTPN3-206ENST00000497739 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
PTPN3-206ENST00000497739 CEP152O94986 1710 aa14.66□□□□□ -0.06
PTPN3-206ENST00000497739 TSPY4P0CV99 314 aa14.66□□□□□ -0.06
PTPN3-206ENST00000497739 TSPY10P0CW01 314 aa14.66□□□□□ -0.06
PTPN3-206ENST00000497739 VASPP50552 380 aaPredicted RBP14.66□□□□□ -0.06
PTPN3-206ENST00000497739 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
PTPN3-206ENST00000497739 DUOX2Q9NRD8 1548 aa14.64□□□□□ -0.07
PTPN3-206ENST00000497739 PTPN23Q9H3S7 1636 aa14.63□□□□□ -0.07
PTPN3-206ENST00000497739 TMEM2Q9UHN6 1383 aa14.62□□□□□ -0.07
PTPN3-206ENST00000497739 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTPN3-206ENST00000497739 PIK3C2BO00750 1634 aa14.62□□□□□ -0.07
PTPN3-206ENST00000497739 POTEAQ6S8J7 498 aa14.61□□□□□ -0.07
PTPN3-206ENST00000497739 TXNDC2Q86VQ3 553 aa14.61□□□□□ -0.07
PTPN3-206ENST00000497739 RTN4Q9NQC3 1192 aaKnown RBP14.61□□□□□ -0.07
PTPN3-206ENST00000497739 TMEM94Q12767 1356 aa14.6□□□□□ -0.07
PTPN3-206ENST00000497739 ERBINQ96RT1 1412 aa14.6□□□□□ -0.07
PTPN3-206ENST00000497739 TET3O43151 1660 aa14.6□□□□□ -0.07
PTPN3-206ENST00000497739 KIF15Q9NS87 1388 aa14.6□□□□□ -0.07
PTPN3-206ENST00000497739 FGD6Q6ZV73 1430 aa14.59□□□□□ -0.07
PTPN3-206ENST00000497739 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
PTPN3-206ENST00000497739 CROCC2H7BZ55 1655 aa14.58□□□□□ -0.07
PTPN3-206ENST00000497739 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.07
PTPN3-206ENST00000497739 NWD1Q149M9 1564 aa14.58□□□□□ -0.08
PTPN3-206ENST00000497739 ROBO1Q9Y6N7 1651 aa14.58□□□□□ -0.08
PTPN3-206ENST00000497739 EFCAB6Q5THR3 1501 aa14.57□□□□□ -0.08
PTPN3-206ENST00000497739 LMTK2Q8IWU2 1503 aa14.57□□□□□ -0.08
PTPN3-206ENST00000497739 FAM50AQ14320 339 aaKnown RBP14.57□□□□□ -0.08
PTPN3-206ENST00000497739 ABCC5O15440 1437 aa14.57□□□□□ -0.08
PTPN3-206ENST00000497739 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
PTPN3-206ENST00000497739 NKTRP30414 1462 aaKnown RBP14.56□□□□□ -0.08
PTPN3-206ENST00000497739 KCNA6P17658 529 aa14.54□□□□□ -0.08
PTPN3-206ENST00000497739 MIER1Q8N108 512 aa14.54□□□□□ -0.08
PTPN3-206ENST00000497739 PIP4P2Q8N4L2 257 aa14.54□□□□□ -0.08
PTPN3-206ENST00000497739 EID1Q9Y6B2 187 aa14.54□□□□□ -0.08
PTPN3-206ENST00000497739 NOS1P29475 1434 aa14.54□□□□□ -0.08
PTPN3-206ENST00000497739 ADGRB3O60242 1522 aa14.53□□□□□ -0.08
PTPN3-206ENST00000497739 SRCAPQ6ZRS2 3230 aa14.52□□□□□ -0.08
PTPN3-206ENST00000497739 IDI1Q13907 227 aa14.52□□□□□ -0.09
PTPN3-206ENST00000497739 IFNLR1Q8IU57 520 aaPredicted RBP14.52□□□□□ -0.09
PTPN3-206ENST00000497739 CFAP65Q6ZU64 1925 aaKnown RBP14.52□□□□□ -0.09
PTPN3-206ENST00000497739 SETD1AO15047 1707 aaKnown RBP14.52□□□□□ -0.09
PTPN3-206ENST00000497739 DAPK1P53355 1430 aa14.51□□□□□ -0.09
PTPN3-206ENST00000497739 PPARGC1BQ86YN6 1023 aaKnown RBP14.51□□□□□ -0.09
PTPN3-206ENST00000497739 RBM33Q96EV2 1170 aaKnown RBP14.51□□□□□ -0.09
PTPN3-206ENST00000497739 SLC26A8Q96RN1 970 aa14.51□□□□□ -0.09
PTPN3-206ENST00000497739 RRP7BPQ9NSQ0 103 aa14.5□□□□□ -0.09
PTPN3-206ENST00000497739 ZFYVE9O95405 1425 aa14.49□□□□□ -0.09
PTPN3-206ENST00000497739 MNX1P50219 401 aaPredicted RBP14.49□□□□□ -0.09
PTPN3-206ENST00000497739 CHADLQ6NUI6 762 aa14.49□□□□□ -0.09
PTPN3-206ENST00000497739 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
PTPN3-206ENST00000497739 LRP6O75581 1613 aa14.48□□□□□ -0.09
PTPN3-206ENST00000497739 COL16A1Q07092 1604 aaPredicted RBP14.48□□□□□ -0.09
PTPN3-206ENST00000497739 ANKRD30AQ9BXX3 1397 aa14.48□□□□□ -0.09
PTPN3-206ENST00000497739 PROSER2Q86WR7 435 aaPredicted RBP14.47□□□□□ -0.09
PTPN3-206ENST00000497739 JCADQ9P266 1359 aa14.47□□□□□ -0.09
PTPN3-206ENST00000497739 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
PTPN3-206ENST00000497739 CHIC2Q9UKJ5 165 aa14.46□□□□□ -0.09
PTPN3-206ENST00000497739 KANK1Q14678 1352 aa14.46□□□□□ -0.1
PTPN3-206ENST00000497739 PHLPP1O60346 1717 aa14.45□□□□□ -0.1
PTPN3-206ENST00000497739 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
PTPN3-206ENST00000497739 SLAIN2Q9P270 581 aa14.45□□□□□ -0.1
PTPN3-206ENST00000497739 MSH6P52701 1360 aa14.45□□□□□ -0.1
PTPN3-206ENST00000497739 PLEKHG1Q9ULL1 1385 aa14.44□□□□□ -0.1
PTPN3-206ENST00000497739 ADGRL2O95490 1459 aa14.43□□□□□ -0.1
PTPN3-206ENST00000497739 RPRD2Q5VT52 1461 aaKnown RBP14.43□□□□□ -0.1
PTPN3-206ENST00000497739 ITGAEP38570 1179 aa14.42□□□□□ -0.1
PTPN3-206ENST00000497739 AHDC1Q5TGY3 1603 aaPredicted RBP14.41□□□□□ -0.1
PTPN3-206ENST00000497739 SLC52A1Q9NWF4 448 aa14.41□□□□□ -0.1
PTPN3-206ENST00000497739 NCOA3Q9Y6Q9 1424 aa14.41□□□□□ -0.1
PTPN3-206ENST00000497739 CHD2O14647 1828 aaKnown RBP14.4□□□□□ -0.1
PTPN3-206ENST00000497739 TMEM131LA2VDJ0 1609 aa14.4□□□□□ -0.1
PTPN3-206ENST00000497739 ADAMTS13Q76LX8 1427 aa14.4□□□□□ -0.1
PTPN3-206ENST00000497739 RIMS2Q9UQ26 1411 aa14.4□□□□□ -0.1
PTPN3-206ENST00000497739 DIP2AQ14689 1571 aa14.39□□□□□ -0.11
PTPN3-206ENST00000497739 SPATA31A6Q5VVP1 1343 aa14.38□□□□□ -0.11
PTPN3-206ENST00000497739 SHPRHQ149N8 1683 aa14.37□□□□□ -0.11
PTPN3-206ENST00000497739 UPF1Q92900 1129 aaKnown RBP eCLIP14.37□□□□□ -0.11
PTPN3-206ENST00000497739 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
PTPN3-206ENST00000497739 MYO5BQ9ULV0 1848 aa14.36□□□□□ -0.11
PTPN3-206ENST00000497739 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
PTPN3-206ENST00000497739 TBX22Q9Y458 520 aa14.35□□□□□ -0.11
PTPN3-206ENST00000497739 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
PTPN3-206ENST00000497739 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.35□□□□□ -0.11
PTPN3-206ENST00000497739 ANKRD50Q9ULJ7 1429 aa14.34□□□□□ -0.11
PTPN3-206ENST00000497739 CDK12Q9NYV4 1490 aaPredicted RBP14.34□□□□□ -0.11
PTPN3-206ENST00000497739 ROCK1Q13464 1354 aa14.33□□□□□ -0.12
PTPN3-206ENST00000497739 PTPRUQ92729 1446 aa14.32□□□□□ -0.12
PTPN3-206ENST00000497739 RRBP1Q9P2E9 1410 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms