RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 NPHP4O75161 1426 aaPredicted RBP23.69■■□□□ 1.38
TNRC18-210ENST00000497663 PITPNM1O00562 1244 aa23.67■■□□□ 1.38
TNRC18-210ENST00000497663 PRDM15P57071 1507 aaPredicted RBP23.67■■□□□ 1.38
TNRC18-210ENST00000497663 MED14O60244 1454 aa23.67■■□□□ 1.38
TNRC18-210ENST00000497663 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
TNRC18-210ENST00000497663 LTKP29376 864 aa23.64■■□□□ 1.37
TNRC18-210ENST00000497663 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
TNRC18-210ENST00000497663 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
TNRC18-210ENST00000497663 ARHGAP31Q2M1Z3 1444 aa23.61■■□□□ 1.37
TNRC18-210ENST00000497663 STRCP1A6NGW2 1772 aa23.61■■□□□ 1.37
TNRC18-210ENST00000497663 PIP4K2BP78356 416 aa23.61■■□□□ 1.37
TNRC18-210ENST00000497663 ALKQ9UM73 1620 aa23.6■■□□□ 1.37
TNRC18-210ENST00000497663 IQGAP1P46940 1657 aa23.6■■□□□ 1.37
TNRC18-210ENST00000497663 CPS1P31327 1500 aa23.59■■□□□ 1.37
TNRC18-210ENST00000497663 ANKRD30AQ9BXX3 1397 aa23.58■■□□□ 1.37
TNRC18-210ENST00000497663 FAM50AQ14320 339 aaKnown RBP23.58■■□□□ 1.37
TNRC18-210ENST00000497663 HSPA1LP34931 641 aa23.57■■□□□ 1.36
TNRC18-210ENST00000497663 ARHGAP23Q9P227 1491 aa23.56■■□□□ 1.36
TNRC18-210ENST00000497663 IDI1Q13907 227 aa23.54■■□□□ 1.36
TNRC18-210ENST00000497663 TXNDC2Q86VQ3 553 aa23.54■■□□□ 1.36
TNRC18-210ENST00000497663 PIK3C2BO00750 1634 aa23.54■■□□□ 1.36
TNRC18-210ENST00000497663 SCAF11Q99590 1463 aaKnown RBP23.54■■□□□ 1.36
TNRC18-210ENST00000497663 PRR29P0C7W0 189 aa23.53■■□□□ 1.36
TNRC18-210ENST00000497663 ADGRL2O95490 1459 aa23.53■■□□□ 1.36
TNRC18-210ENST00000497663 SLIT1O75093 1534 aa23.53■■□□□ 1.36
TNRC18-210ENST00000497663 LMTK2Q8IWU2 1503 aa23.53■■□□□ 1.36
TNRC18-210ENST00000497663 LRRC7Q96NW7 1537 aa23.53■■□□□ 1.36
TNRC18-210ENST00000497663 VASPP50552 380 aaPredicted RBP23.52■■□□□ 1.36
TNRC18-210ENST00000497663 SYNMO15061 1565 aa23.52■■□□□ 1.36
TNRC18-210ENST00000497663 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
TNRC18-210ENST00000497663 KANK1Q14678 1352 aa23.5■■□□□ 1.35
TNRC18-210ENST00000497663 TOM1O60784 492 aa23.49■■□□□ 1.35
TNRC18-210ENST00000497663 TMEM2Q9UHN6 1383 aa23.49■■□□□ 1.35
TNRC18-210ENST00000497663 NOS1P29475 1434 aa23.48■■□□□ 1.35
TNRC18-210ENST00000497663 EFCAB6Q5THR3 1501 aa23.46■■□□□ 1.35
TNRC18-210ENST00000497663 ANKRD50Q9ULJ7 1429 aa23.46■■□□□ 1.35
TNRC18-210ENST00000497663 SOCS7O14512 581 aa23.41■■□□□ 1.34
TNRC18-210ENST00000497663 CHRDL2Q6WN34 429 aa23.41■■□□□ 1.34
TNRC18-210ENST00000497663 RBM33Q96EV2 1170 aaKnown RBP23.4■■□□□ 1.34
TNRC18-210ENST00000497663 SLC26A8Q96RN1 970 aa23.4■■□□□ 1.34
TNRC18-210ENST00000497663 EID1Q9Y6B2 187 aa23.4■■□□□ 1.34
TNRC18-210ENST00000497663 PLCD3Q8N3E9 789 aa23.38■■□□□ 1.33
TNRC18-210ENST00000497663 XIRP1Q702N8 1843 aaKnown RBP23.38■■□□□ 1.33
TNRC18-210ENST00000497663 MIER1Q8N108 512 aa23.37■■□□□ 1.33
TNRC18-210ENST00000497663 TET3O43151 1660 aa23.37■■□□□ 1.33
TNRC18-210ENST00000497663 ADGRB3O60242 1522 aa23.37■■□□□ 1.33
TNRC18-210ENST00000497663 ITGAEP38570 1179 aa23.36■■□□□ 1.33
TNRC18-210ENST00000497663 MED1Q15648 1581 aaPredicted RBP23.35■■□□□ 1.33
TNRC18-210ENST00000497663 PLEKHG5O94827 1062 aa23.34■■□□□ 1.33
TNRC18-210ENST00000497663 KDM5AP29375 1690 aaKnown RBP23.32■■□□□ 1.32
TNRC18-210ENST00000497663 SLC52A1Q9NWF4 448 aa23.32■■□□□ 1.32
TNRC18-210ENST00000497663 UNC13BO14795 1591 aa23.31■■□□□ 1.32
TNRC18-210ENST00000497663 TMEM94Q12767 1356 aa23.31■■□□□ 1.32
TNRC18-210ENST00000497663 ZFYVE9O95405 1425 aa23.31■■□□□ 1.32
TNRC18-210ENST00000497663 RPRD2Q5VT52 1461 aaKnown RBP23.3■■□□□ 1.32
TNRC18-210ENST00000497663 MYO5BQ9ULV0 1848 aa23.29■■□□□ 1.32
TNRC18-210ENST00000497663 KCNA6P17658 529 aa23.29■■□□□ 1.32
TNRC18-210ENST00000497663 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
TNRC18-210ENST00000497663 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
TNRC18-210ENST00000497663 E9PCH4 1651 aa23.27■■□□□ 1.32
TNRC18-210ENST00000497663 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
TNRC18-210ENST00000497663 RIMS2Q9UQ26 1411 aa23.26■■□□□ 1.31
TNRC18-210ENST00000497663 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
TNRC18-210ENST00000497663 CHGAP10645 457 aaKnown RBP23.24■■□□□ 1.31
TNRC18-210ENST00000497663 PROSER2Q86WR7 435 aaPredicted RBP23.24■■□□□ 1.31
TNRC18-210ENST00000497663 BCANQ96GW7 911 aa23.24■■□□□ 1.31
TNRC18-210ENST00000497663 NUP155O75694 1391 aa23.23■■□□□ 1.31
TNRC18-210ENST00000497663 PLEKHG1Q9ULL1 1385 aa23.21■■□□□ 1.31
TNRC18-210ENST00000497663 IQGAP3Q86VI3 1631 aa23.21■■□□□ 1.31
TNRC18-210ENST00000497663 NWD1Q149M9 1564 aa23.2■■□□□ 1.3
TNRC18-210ENST00000497663 FXR2P51116 673 aaKnown RBP eCLIP23.2■■□□□ 1.31e-11■■■□□ 17.5
TNRC18-210ENST00000497663 CREBZFQ9NS37 354 aa23.19■■□□□ 1.3
TNRC18-210ENST00000497663 ADAMTS13Q76LX8 1427 aa23.17■■□□□ 1.3
TNRC18-210ENST00000497663 PPP1R15AO75807 674 aaPredicted RBP23.17■■□□□ 1.3
TNRC18-210ENST00000497663 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
TNRC18-210ENST00000497663 IFNLR1Q8IU57 520 aaPredicted RBP23.16■■□□□ 1.3
TNRC18-210ENST00000497663 RGS17Q9UGC6 210 aaPredicted RBP23.16■■□□□ 1.3
TNRC18-210ENST00000497663 KLHL34Q8N239 644 aa23.15■■□□□ 1.3
TNRC18-210ENST00000497663 ZBTB47Q9UFB7 747 aaPredicted RBP23.15■■□□□ 1.3
TNRC18-210ENST00000497663 NKTRP30414 1462 aaKnown RBP23.14■■□□□ 1.29
TNRC18-210ENST00000497663 PIP4P2Q8N4L2 257 aa23.12■■□□□ 1.29
TNRC18-210ENST00000497663 TBX22Q9Y458 520 aa23.12■■□□□ 1.29
TNRC18-210ENST00000497663 ROBO1Q9Y6N7 1651 aa23.12■■□□□ 1.29
TNRC18-210ENST00000497663 CHD2O14647 1828 aaKnown RBP23.11■■□□□ 1.29
TNRC18-210ENST00000497663 PRKAR2AP13861 404 aaKnown RBP23.1■■□□□ 1.29
TNRC18-210ENST00000497663 PTPRUQ92729 1446 aa23.09■■□□□ 1.29
TNRC18-210ENST00000497663 RRBP1Q9P2E9 1410 aaKnown RBP23.09■■□□□ 1.29
TNRC18-210ENST00000497663 CHADLQ6NUI6 762 aa23.08■■□□□ 1.29
TNRC18-210ENST00000497663 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.07■■□□□ 1.28
TNRC18-210ENST00000497663 SLAIN2Q9P270 581 aa23.07■■□□□ 1.28
TNRC18-210ENST00000497663 MSH6P52701 1360 aa23.06■■□□□ 1.28
TNRC18-210ENST00000497663 NAIPQ13075 1403 aa23.06■■□□□ 1.28
TNRC18-210ENST00000497663 HDGFP51858 240 aaKnown RBP23.05■■□□□ 1.28
TNRC18-210ENST00000497663 NRXN3Q9Y4C0 1643 aa23.03■■□□□ 1.28
TNRC18-210ENST00000497663 AMOTL2Q9Y2J4 779 aa23.01■■□□□ 1.27
TNRC18-210ENST00000497663 SPHKAPQ2M3C7 1700 aa23.01■■□□□ 1.27
TNRC18-210ENST00000497663 CLTCL1P53675 1640 aa23■■□□□ 1.27
TNRC18-210ENST00000497663 POTEAQ6S8J7 498 aa22.99■■□□□ 1.27
TNRC18-210ENST00000497663 METP08581 1390 aa22.99■■□□□ 1.27
TNRC18-210ENST00000497663 ZNF326Q5BKZ1 582 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 369 ms