RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 KIF15Q9NS87 1388 aa16.78■□□□□ 0.28
TOM1-217ENST00000497448 LMTK2Q8IWU2 1503 aa16.78■□□□□ 0.28
TOM1-217ENST00000497448 MYO5BQ9ULV0 1848 aa16.77■□□□□ 0.27
TOM1-217ENST00000497448 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.76■□□□□ 0.27
TOM1-217ENST00000497448 IDI1Q13907 227 aa16.76■□□□□ 0.27
TOM1-217ENST00000497448 RXRBP28702 533 aa16.75■□□□□ 0.27
TOM1-217ENST00000497448 RGS12O14924 1447 aa16.74■□□□□ 0.27
TOM1-217ENST00000497448 NOS1P29475 1434 aa16.74■□□□□ 0.27
TOM1-217ENST00000497448 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
TOM1-217ENST00000497448 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
TOM1-217ENST00000497448 GCC2Q8IWJ2 1684 aa16.73■□□□□ 0.27
TOM1-217ENST00000497448 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
TOM1-217ENST00000497448 KANK1Q14678 1352 aa16.72■□□□□ 0.27
TOM1-217ENST00000497448 PLEKHG1Q9ULL1 1385 aa16.72■□□□□ 0.27
TOM1-217ENST00000497448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
TOM1-217ENST00000497448 BCANQ96GW7 911 aa16.69■□□□□ 0.26
TOM1-217ENST00000497448 AFF2P51816 1311 aa16.69■□□□□ 0.26
TOM1-217ENST00000497448 NHSL1Q5SYE7 1610 aa16.68■□□□□ 0.26
TOM1-217ENST00000497448 ABCC5O15440 1437 aa16.68■□□□□ 0.26
TOM1-217ENST00000497448 RRP7BPQ9NSQ0 103 aa16.67■□□□□ 0.26
TOM1-217ENST00000497448 TMEM131LA2VDJ0 1609 aa16.67■□□□□ 0.26
TOM1-217ENST00000497448 ASXL1Q8IXJ9 1541 aa16.66■□□□□ 0.26
TOM1-217ENST00000497448 NUTM2BA6NNL0 878 aaPredicted RBP16.66■□□□□ 0.26
TOM1-217ENST00000497448 NUTM2EB1AL46 878 aaPredicted RBP16.66■□□□□ 0.26
TOM1-217ENST00000497448 NUTM2AQ8IVF1 878 aaPredicted RBP16.66■□□□□ 0.26
TOM1-217ENST00000497448 RIMS2Q9UQ26 1411 aa16.66■□□□□ 0.26
TOM1-217ENST00000497448 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
TOM1-217ENST00000497448 CADPS2Q86UW7 1296 aa16.65■□□□□ 0.26
TOM1-217ENST00000497448 PTPN23Q9H3S7 1636 aa16.65■□□□□ 0.26
TOM1-217ENST00000497448 DAPK1P53355 1430 aa16.63■□□□□ 0.25
TOM1-217ENST00000497448 ADAMTS13Q76LX8 1427 aa16.63■□□□□ 0.25
TOM1-217ENST00000497448 SETD5Q9C0A6 1442 aa16.63■□□□□ 0.25
TOM1-217ENST00000497448 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
TOM1-217ENST00000497448 SLC52A1Q9NWF4 448 aa16.63■□□□□ 0.25
TOM1-217ENST00000497448 RPRD2Q5VT52 1461 aaKnown RBP16.62■□□□□ 0.25
TOM1-217ENST00000497448 PPP1R15AO75807 674 aaPredicted RBP16.62■□□□□ 0.25
TOM1-217ENST00000497448 SETBP1Q9Y6X0 1596 aa16.61■□□□□ 0.25
TOM1-217ENST00000497448 ATF3P18847 181 aa16.61■□□□□ 0.25
TOM1-217ENST00000497448 C19orf44Q9H6X5 657 aa16.61■□□□□ 0.25
TOM1-217ENST00000497448 DCCP43146 1447 aa16.61■□□□□ 0.25
TOM1-217ENST00000497448 VPS8Q8N3P4 1428 aa16.61■□□□□ 0.25
TOM1-217ENST00000497448 KANK4Q5T7N3 995 aaPredicted RBP16.6■□□□□ 0.25
TOM1-217ENST00000497448 TBX22Q9Y458 520 aa16.6■□□□□ 0.25
TOM1-217ENST00000497448 TRPM2O94759 1503 aa16.6■□□□□ 0.25
TOM1-217ENST00000497448 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
TOM1-217ENST00000497448 EP400Q96L91 3159 aa16.59■□□□□ 0.25
TOM1-217ENST00000497448 PIK3R4Q99570 1358 aa16.59■□□□□ 0.25
TOM1-217ENST00000497448 XRN1Q8IZH2 1706 aaKnown RBP16.59■□□□□ 0.25
TOM1-217ENST00000497448 NUTM2DQ5VT03 806 aaPredicted RBP16.58■□□□□ 0.24
TOM1-217ENST00000497448 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
TOM1-217ENST00000497448 ATAD2Q6PL18 1390 aa16.58■□□□□ 0.24
TOM1-217ENST00000497448 UNC13BO14795 1591 aa16.57■□□□□ 0.24
TOM1-217ENST00000497448 MST1RQ04912 1400 aa16.57■□□□□ 0.24
TOM1-217ENST00000497448 PTPRUQ92729 1446 aa16.57■□□□□ 0.24
TOM1-217ENST00000497448 PNPLA6Q8IY17 1366 aa16.57■□□□□ 0.24
TOM1-217ENST00000497448 ANKRD30AQ9BXX3 1397 aa16.56■□□□□ 0.24
TOM1-217ENST00000497448 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
TOM1-217ENST00000497448 NRXN3Q9Y4C0 1643 aa16.54■□□□□ 0.24
TOM1-217ENST00000497448 HDGFP51858 240 aaKnown RBP16.53■□□□□ 0.24
TOM1-217ENST00000497448 NALCNQ8IZF0 1738 aa16.53■□□□□ 0.24
TOM1-217ENST00000497448 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
TOM1-217ENST00000497448 ZRANB1Q9UGI0 708 aa16.52■□□□□ 0.24
TOM1-217ENST00000497448 ADGRL2O95490 1459 aa16.52■□□□□ 0.23
TOM1-217ENST00000497448 E9PCH4 1651 aa16.51■□□□□ 0.23
TOM1-217ENST00000497448 LRRC59Q96AG4 307 aaKnown RBP16.51■□□□□ 0.23
TOM1-217ENST00000497448 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
TOM1-217ENST00000497448 LAMC1P11047 1609 aa16.5■□□□□ 0.23
TOM1-217ENST00000497448 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
TOM1-217ENST00000497448 NGLY1Q96IV0 654 aa16.49■□□□□ 0.23
TOM1-217ENST00000497448 AMOTL2Q9Y2J4 779 aa16.49■□□□□ 0.23
TOM1-217ENST00000497448 FOXD1Q16676 465 aa16.48■□□□□ 0.23
TOM1-217ENST00000497448 ADAMTS2O95450 1211 aa16.47■□□□□ 0.23
TOM1-217ENST00000497448 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
TOM1-217ENST00000497448 ADGRL3Q9HAR2 1447 aa16.46■□□□□ 0.23
TOM1-217ENST00000497448 ATRNO75882 1429 aa16.45■□□□□ 0.22
TOM1-217ENST00000497448 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
TOM1-217ENST00000497448 IQGAP3Q86VI3 1631 aa16.45■□□□□ 0.22
TOM1-217ENST00000497448 LRP5O75197 1615 aa16.45■□□□□ 0.22
TOM1-217ENST00000497448 COL22A1Q8NFW1 1626 aaPredicted RBP16.45■□□□□ 0.22
TOM1-217ENST00000497448 USP21Q9UK80 565 aa16.43■□□□□ 0.22
TOM1-217ENST00000497448 TRPC5Q9UL62 973 aaPredicted RBP16.43■□□□□ 0.22
TOM1-217ENST00000497448 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
TOM1-217ENST00000497448 MARF1Q9Y4F3 1742 aaKnown RBP16.42■□□□□ 0.22
TOM1-217ENST00000497448 C1orf167Q5SNV9 1468 aa16.41■□□□□ 0.22
TOM1-217ENST00000497448 METP08581 1390 aa16.39■□□□□ 0.21
TOM1-217ENST00000497448 FNBP4Q8N3X1 1017 aaPredicted RBP16.39■□□□□ 0.21
TOM1-217ENST00000497448 MYOM2P54296 1465 aa16.38■□□□□ 0.21
TOM1-217ENST00000497448 CCDC125Q86Z20 511 aa16.38■□□□□ 0.21
TOM1-217ENST00000497448 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.38■□□□□ 0.21
TOM1-217ENST00000497448 SOS2Q07890 1332 aaPredicted RBP16.37■□□□□ 0.21
TOM1-217ENST00000497448 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
TOM1-217ENST00000497448 SPHKAPQ2M3C7 1700 aa16.35■□□□□ 0.21
TOM1-217ENST00000497448 BRWD3Q6RI45 1802 aa16.35■□□□□ 0.21
TOM1-217ENST00000497448 BLMP54132 1417 aaPredicted RBP16.35■□□□□ 0.21
TOM1-217ENST00000497448 GLI3P10071 1580 aa16.34■□□□□ 0.21
TOM1-217ENST00000497448 NEXMIFQ5QGS0 1516 aa16.32■□□□□ 0.2
TOM1-217ENST00000497448 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
TOM1-217ENST00000497448 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
TOM1-217ENST00000497448 DEFB132Q7Z7B7 95 aa16.29■□□□□ 0.2
TOM1-217ENST00000497448 GJD4Q96KN9 370 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms