RNA–Protein interactions for RNA: ENST00000497221.1

DUSP28-205, Transcript of dual specificity phosphatase 28, humanhuman

TSL 2

Gene DUSP28, Length 488 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-205ENST00000497221 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
DUSP28-205ENST00000497221 ARHGEF12Q9NZN5 1544 aa9.1□□□□□ -0.95
DUSP28-205ENST00000497221 KIDINS220Q9ULH0 1771 aa9.09□□□□□ -0.95
DUSP28-205ENST00000497221 ABCA6Q8N139 1617 aa9.09□□□□□ -0.95
DUSP28-205ENST00000497221 HNRNPMP52272 730 aaKnown RBP eCLIP9.09□□□□□ -0.95
DUSP28-205ENST00000497221 PDAP1Q13442 181 aaKnown RBP9.09□□□□□ -0.95
DUSP28-205ENST00000497221 SETD1BQ9UPS6 1966 aaKnown RBP9.09□□□□□ -0.95
DUSP28-205ENST00000497221 TIAM1Q13009 1591 aa9.08□□□□□ -0.96
DUSP28-205ENST00000497221 VPS8Q8N3P4 1428 aa9.08□□□□□ -0.96
DUSP28-205ENST00000497221 VGFO15240 615 aaPredicted RBP9.08□□□□□ -0.96
DUSP28-205ENST00000497221 PLEKHH2Q8IVE3 1493 aa9.08□□□□□ -0.96
DUSP28-205ENST00000497221 MLH3Q9UHC1 1453 aa9.08□□□□□ -0.96
DUSP28-205ENST00000497221 SPAG9O60271 1321 aaKnown RBP9.07□□□□□ -0.96
DUSP28-205ENST00000497221 ESF1Q9H501 851 aaKnown RBP9.07□□□□□ -0.96
DUSP28-205ENST00000497221 PSEN1P49768 467 aa9.06□□□□□ -0.96
DUSP28-205ENST00000497221 TAOK2Q9UL54 1235 aa9.06□□□□□ -0.96
DUSP28-205ENST00000497221 REREQ9P2R6 1566 aa9.05□□□□□ -0.96
DUSP28-205ENST00000497221 NCOA2Q15596 1464 aa9.05□□□□□ -0.96
DUSP28-205ENST00000497221 RNF166Q96A37 237 aaPredicted RBP9.05□□□□□ -0.96
DUSP28-205ENST00000497221 ATP7AQ04656 1500 aa9.05□□□□□ -0.96
DUSP28-205ENST00000497221 KIAA1107Q9UPP5 1409 aa9.05□□□□□ -0.96
DUSP28-205ENST00000497221 ZNF644Q9H582 1327 aaPredicted RBP9.04□□□□□ -0.96
DUSP28-205ENST00000497221 ADGBQ8N7X0 1667 aa9.04□□□□□ -0.96
DUSP28-205ENST00000497221 INO80Q9ULG1 1556 aaPredicted RBP9.03□□□□□ -0.96
DUSP28-205ENST00000497221 LRRC9Q6ZRR7 1453 aa9.02□□□□□ -0.96
DUSP28-205ENST00000497221 AGLP35573 1532 aa9.02□□□□□ -0.97
DUSP28-205ENST00000497221 C3P01024 1663 aa9.02□□□□□ -0.97
DUSP28-205ENST00000497221 PREX1Q8TCU6 1659 aa9.02□□□□□ -0.97
DUSP28-205ENST00000497221 CEBPAP49715 358 aaPredicted RBP9.02□□□□□ -0.97
DUSP28-205ENST00000497221 CAMSAP2Q08AD1 1489 aa9.01□□□□□ -0.97
DUSP28-205ENST00000497221 MAP3K1Q13233 1512 aa9□□□□□ -0.97
DUSP28-205ENST00000497221 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9□□□□□ -0.97
DUSP28-205ENST00000497221 HSPA2P54652 639 aa9□□□□□ -0.97
DUSP28-205ENST00000497221 KANK4Q5T7N3 995 aaPredicted RBP9□□□□□ -0.97
DUSP28-205ENST00000497221 ZFP91Q96JP5 570 aaPredicted RBP9□□□□□ -0.97
DUSP28-205ENST00000497221 A2MP01023 1474 aa9□□□□□ -0.97
DUSP28-205ENST00000497221 CCDC141Q6ZP82 1450 aa9□□□□□ -0.97
DUSP28-205ENST00000497221 LMTK3Q96Q04 1460 aa9□□□□□ -0.97
DUSP28-205ENST00000497221 C3orf67Q6ZVT6 689 aa8.99□□□□□ -0.97
DUSP28-205ENST00000497221 CLTCQ00610 1675 aaKnown RBP8.99□□□□□ -0.97
DUSP28-205ENST00000497221 MROH2AA6NES4 1674 aa8.98□□□□□ -0.97
DUSP28-205ENST00000497221 MBD5Q9P267 1494 aa8.98□□□□□ -0.97
DUSP28-205ENST00000497221 TSPY4P0CV99 314 aa8.98□□□□□ -0.97
DUSP28-205ENST00000497221 TSPY10P0CW01 314 aa8.98□□□□□ -0.97
DUSP28-205ENST00000497221 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
DUSP28-205ENST00000497221 GGT6Q6P531 493 aa8.98□□□□□ -0.97
DUSP28-205ENST00000497221 ILDR1Q86SU0 546 aaPredicted RBP8.98□□□□□ -0.97
DUSP28-205ENST00000497221 CFAP65Q6ZU64 1925 aaKnown RBP8.97□□□□□ -0.97
DUSP28-205ENST00000497221 CNTLNQ9NXG0 1405 aa8.97□□□□□ -0.97
DUSP28-205ENST00000497221 HS6ST3Q8IZP7 471 aa8.97□□□□□ -0.97
DUSP28-205ENST00000497221 PLXNC1O60486 1568 aa8.97□□□□□ -0.97
DUSP28-205ENST00000497221 ARHGEF5Q12774 1597 aa8.97□□□□□ -0.97
DUSP28-205ENST00000497221 RTEL1-TNFRSF6BF6WH68 1400 aa8.97□□□□□ -0.97
DUSP28-205ENST00000497221 UHRF1BP1Q6BDS2 1440 aa8.97□□□□□ -0.97
DUSP28-205ENST00000497221 PDCD7Q8N8D1 485 aaKnown RBP8.96□□□□□ -0.98
DUSP28-205ENST00000497221 MYOM3Q5VTT5 1437 aa8.96□□□□□ -0.98
DUSP28-205ENST00000497221 DHX29Q7Z478 1369 aaKnown RBP8.95□□□□□ -0.98
DUSP28-205ENST00000497221 KIF3BO15066 747 aa8.94□□□□□ -0.98
DUSP28-205ENST00000497221 BCL11BQ9C0K0 894 aaPredicted RBP8.94□□□□□ -0.98
DUSP28-205ENST00000497221 MIA2Q96PC5 1412 aa8.94□□□□□ -0.98
DUSP28-205ENST00000497221 PTPN23Q9H3S7 1636 aa8.94□□□□□ -0.98
DUSP28-205ENST00000497221 ZMYM3Q14202 1370 aa8.93□□□□□ -0.98
DUSP28-205ENST00000497221 STRCQ7RTU9 1775 aa8.92□□□□□ -0.98
DUSP28-205ENST00000497221 CROCC2H7BZ55 1655 aa8.92□□□□□ -0.98
DUSP28-205ENST00000497221 MAST1Q9Y2H9 1570 aa8.92□□□□□ -0.98
DUSP28-205ENST00000497221 L3MBTL3Q96JM7 780 aaPredicted RBP8.92□□□□□ -0.98
DUSP28-205ENST00000497221 STK25O00506 426 aa8.91□□□□□ -0.98
DUSP28-205ENST00000497221 CABP2Q9NPB3 220 aa8.91□□□□□ -0.98
DUSP28-205ENST00000497221 NPATQ14207 1427 aa8.9□□□□□ -0.98
DUSP28-205ENST00000497221 SOX12O15370 315 aa8.9□□□□□ -0.98
DUSP28-205ENST00000497221 MYO3AQ8NEV4 1616 aa8.9□□□□□ -0.99
DUSP28-205ENST00000497221 FGD6Q6ZV73 1430 aa8.89□□□□□ -0.99
DUSP28-205ENST00000497221 CEP152O94986 1710 aa8.89□□□□□ -0.99
DUSP28-205ENST00000497221 WASHC2CQ9Y4E1 1318 aa8.89□□□□□ -0.99
DUSP28-205ENST00000497221 HOXB3P14651 431 aaPredicted RBP8.89□□□□□ -0.99
DUSP28-205ENST00000497221 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
DUSP28-205ENST00000497221 STK24Q9Y6E0 443 aa8.89□□□□□ -0.99
DUSP28-205ENST00000497221 EIF2AK4Q9P2K8 1649 aaKnown RBP8.89□□□□□ -0.99
DUSP28-205ENST00000497221 KDM5DQ9BY66 1539 aa8.89□□□□□ -0.99
DUSP28-205ENST00000497221 ZNF142P52746 1687 aaPredicted RBP8.88□□□□□ -0.99
DUSP28-205ENST00000497221 DNMT1P26358 1616 aaKnown RBP8.88□□□□□ -0.99
DUSP28-205ENST00000497221 FAM50AQ14320 339 aaKnown RBP8.88□□□□□ -0.99
DUSP28-205ENST00000497221 FAM135AQ9P2D6 1515 aa8.88□□□□□ -0.99
DUSP28-205ENST00000497221 PTPRKQ15262 1439 aa8.88□□□□□ -0.99
DUSP28-205ENST00000497221 CAMSAP1Q5T5Y3 1602 aa8.87□□□□□ -0.99
DUSP28-205ENST00000497221 RNF17Q9BXT8 1623 aaKnown RBP8.87□□□□□ -0.99
DUSP28-205ENST00000497221 CEP170BQ9Y4F5 1589 aaPredicted RBP8.87□□□□□ -0.99
DUSP28-205ENST00000497221 ERBB3P21860 1342 aa8.87□□□□□ -0.99
DUSP28-205ENST00000497221 DUOX2Q9NRD8 1548 aa8.87□□□□□ -0.99
DUSP28-205ENST00000497221 HOXB1P14653 301 aaPredicted RBP8.87□□□□□ -0.99
DUSP28-205ENST00000497221 MKRN3Q13064 507 aaKnown RBP8.87□□□□□ -0.99
DUSP28-205ENST00000497221 RRP7BPQ9NSQ0 103 aa8.87□□□□□ -0.99
DUSP28-205ENST00000497221 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
DUSP28-205ENST00000497221 ZC3H13Q5T200 1668 aaKnown RBP8.87□□□□□ -0.99
DUSP28-205ENST00000497221 ABCC5O15440 1437 aa8.87□□□□□ -0.99
DUSP28-205ENST00000497221 DAPK1P53355 1430 aa8.87□□□□□ -0.99
DUSP28-205ENST00000497221 KIF15Q9NS87 1388 aa8.86□□□□□ -0.99
DUSP28-205ENST00000497221 TCOF1Q13428 1488 aaKnown RBP8.86□□□□□ -0.99
DUSP28-205ENST00000497221 SHANK2Q9UPX8 1470 aa8.86□□□□□ -0.99
DUSP28-205ENST00000497221 CHGAP10645 457 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms