RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 AKNAQ7Z591 1439 aa10.35□□□□□ -0.75
HOXA9-206ENST00000497089 TULP1O00294 542 aaPredicted RBP10.35□□□□□ -0.75
HOXA9-206ENST00000497089 CCDC18Q5T9S5 1454 aa10.35□□□□□ -0.75
HOXA9-206ENST00000497089 PLCH2O75038 1416 aa10.35□□□□□ -0.75
HOXA9-206ENST00000497089 PCF11O94913 1555 aaKnown RBP10.34□□□□□ -0.75
HOXA9-206ENST00000497089 RICTORQ6R327 1708 aa10.34□□□□□ -0.75
HOXA9-206ENST00000497089 FYCO1Q9BQS8 1478 aa10.34□□□□□ -0.75
HOXA9-206ENST00000497089 RAPGEF3O95398 923 aa10.34□□□□□ -0.75
HOXA9-206ENST00000497089 CLIP1P30622 1438 aa10.34□□□□□ -0.75
HOXA9-206ENST00000497089 DENND4BO75064 1496 aaPredicted RBP10.33□□□□□ -0.76
HOXA9-206ENST00000497089 KIF14Q15058 1648 aa10.33□□□□□ -0.76
HOXA9-206ENST00000497089 POTEMA6NI47 508 aa10.33□□□□□ -0.76
HOXA9-206ENST00000497089 MYO5CQ9NQX4 1742 aa10.33□□□□□ -0.76
HOXA9-206ENST00000497089 ZMYM4Q5VZL5 1548 aa10.33□□□□□ -0.76
HOXA9-206ENST00000497089 ATP1B4Q9UN42 357 aaPredicted RBP10.32□□□□□ -0.76
HOXA9-206ENST00000497089 EMILIN3Q9NT22 766 aa10.31□□□□□ -0.76
HOXA9-206ENST00000497089 ARHGEF40Q8TER5 1519 aa10.3□□□□□ -0.76
HOXA9-206ENST00000497089 ARIH1Q9Y4X5 557 aaPredicted RBP10.3□□□□□ -0.76
HOXA9-206ENST00000497089 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
HOXA9-206ENST00000497089 SLC34A2O95436 690 aa10.29□□□□□ -0.76
HOXA9-206ENST00000497089 EFCAB2Q5VUJ9 269 aa10.29□□□□□ -0.76
HOXA9-206ENST00000497089 POGZQ7Z3K3 1410 aa10.29□□□□□ -0.76
HOXA9-206ENST00000497089 ADAMTSL3P82987 1691 aa10.28□□□□□ -0.76
HOXA9-206ENST00000497089 SCAPERQ9BY12 1400 aa10.28□□□□□ -0.76
HOXA9-206ENST00000497089 HOXB3P14651 431 aaPredicted RBP10.27□□□□□ -0.76
HOXA9-206ENST00000497089 OXER1Q8TDS5 423 aa10.27□□□□□ -0.76
HOXA9-206ENST00000497089 PCDH10Q9P2E7 1040 aa10.27□□□□□ -0.76
HOXA9-206ENST00000497089 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.76
HOXA9-206ENST00000497089 PREX2Q70Z35 1606 aa10.27□□□□□ -0.77
HOXA9-206ENST00000497089 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
HOXA9-206ENST00000497089 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
HOXA9-206ENST00000497089 PTCD2Q8WV60 388 aaKnown RBP10.26□□□□□ -0.77
HOXA9-206ENST00000497089 BCORL1Q5H9F3 1711 aa10.26□□□□□ -0.77
HOXA9-206ENST00000497089 ARHGAP5Q13017 1502 aa10.26□□□□□ -0.77
HOXA9-206ENST00000497089 ZFYVE16Q7Z3T8 1539 aa10.26□□□□□ -0.77
HOXA9-206ENST00000497089 UPF1Q92900 1129 aaKnown RBP eCLIP10.26□□□□□ -0.77
HOXA9-206ENST00000497089 CEP162Q5TB80 1403 aa10.25□□□□□ -0.77
HOXA9-206ENST00000497089 DPYSL4O14531 572 aa10.25□□□□□ -0.77
HOXA9-206ENST00000497089 SNPHO15079 494 aa10.25□□□□□ -0.77
HOXA9-206ENST00000497089 KDM5CP41229 1560 aa10.25□□□□□ -0.77
HOXA9-206ENST00000497089 YEATS2Q9ULM3 1422 aa10.25□□□□□ -0.77
HOXA9-206ENST00000497089 ZNF518AQ6AHZ1 1483 aa10.24□□□□□ -0.77
HOXA9-206ENST00000497089 CDC42BPAQ5VT25 1732 aa10.24□□□□□ -0.77
HOXA9-206ENST00000497089 LMOD2Q6P5Q4 547 aa10.24□□□□□ -0.77
HOXA9-206ENST00000497089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
HOXA9-206ENST00000497089 SIGLEC1Q9BZZ2 1709 aa10.23□□□□□ -0.77
HOXA9-206ENST00000497089 ABCC1P33527 1531 aa10.23□□□□□ -0.77
HOXA9-206ENST00000497089 ATP10AO60312 1499 aa10.22□□□□□ -0.77
HOXA9-206ENST00000497089 PTPRMP28827 1452 aa10.22□□□□□ -0.77
HOXA9-206ENST00000497089 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
HOXA9-206ENST00000497089 TBC1D12O60347 775 aa10.22□□□□□ -0.77
HOXA9-206ENST00000497089 MAP3K9P80192 1104 aa10.22□□□□□ -0.77
HOXA9-206ENST00000497089 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
HOXA9-206ENST00000497089 MLH3Q9UHC1 1453 aa10.21□□□□□ -0.77
HOXA9-206ENST00000497089 ARHGEF12Q9NZN5 1544 aa10.21□□□□□ -0.77
HOXA9-206ENST00000497089 GPATCH8Q9UKJ3 1502 aaKnown RBP10.21□□□□□ -0.77
HOXA9-206ENST00000497089 SEMA3EO15041 775 aa10.21□□□□□ -0.78
HOXA9-206ENST00000497089 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.78
HOXA9-206ENST00000497089 PCDHGA4Q9Y5G9 962 aa10.21□□□□□ -0.78
HOXA9-206ENST00000497089 MADDQ8WXG6 1647 aa10.21□□□□□ -0.78
HOXA9-206ENST00000497089 HECW2Q9P2P5 1572 aa10.2□□□□□ -0.78
HOXA9-206ENST00000497089 REREQ9P2R6 1566 aa10.2□□□□□ -0.78
HOXA9-206ENST00000497089 ITSN2Q9NZM3 1697 aa10.2□□□□□ -0.78
HOXA9-206ENST00000497089 C9orf84Q5VXU9 1444 aa10.2□□□□□ -0.78
HOXA9-206ENST00000497089 TESPA1A2RU30 521 aaPredicted RBP10.19□□□□□ -0.78
HOXA9-206ENST00000497089 PDIA6Q15084 440 aa10.19□□□□□ -0.78
HOXA9-206ENST00000497089 ZNF710Q8N1W2 664 aa10.19□□□□□ -0.78
HOXA9-206ENST00000497089 AFAP1Q8N556 730 aa10.19□□□□□ -0.78
HOXA9-206ENST00000497089 ARID4BQ4LE39 1312 aaPredicted RBP10.19□□□□□ -0.78
HOXA9-206ENST00000497089 TRAPPC8Q9Y2L5 1435 aa10.19□□□□□ -0.78
HOXA9-206ENST00000497089 EHBP1L1Q8N3D4 1523 aa10.19□□□□□ -0.78
HOXA9-206ENST00000497089 SPDYE16A6NNV3 312 aaPredicted RBP10.18□□□□□ -0.78
HOXA9-206ENST00000497089 MTUS2Q5JR59 1369 aa10.18□□□□□ -0.78
HOXA9-206ENST00000497089 KIAA1107Q9UPP5 1409 aa10.18□□□□□ -0.78
HOXA9-206ENST00000497089 SAMD9LQ8IVG5 1584 aa10.18□□□□□ -0.78
HOXA9-206ENST00000497089 DIP2CQ9Y2E4 1556 aa10.18□□□□□ -0.78
HOXA9-206ENST00000497089 GPR153Q6NV75 609 aa10.17□□□□□ -0.78
HOXA9-206ENST00000497089 KIDINS220Q9ULH0 1771 aa10.16□□□□□ -0.78
HOXA9-206ENST00000497089 RIMS1Q86UR5 1692 aaKnown RBP10.16□□□□□ -0.78
HOXA9-206ENST00000497089 ABCA6Q8N139 1617 aa10.16□□□□□ -0.78
HOXA9-206ENST00000497089 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
HOXA9-206ENST00000497089 LOC105371045A0A1W2PR82 267 aa10.16□□□□□ -0.78
HOXA9-206ENST00000497089 EVI5O60447 810 aa10.16□□□□□ -0.78
HOXA9-206ENST00000497089 ARSIQ5FYB1 569 aa10.16□□□□□ -0.78
HOXA9-206ENST00000497089 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
HOXA9-206ENST00000497089 AGLP35573 1532 aa10.16□□□□□ -0.78
HOXA9-206ENST00000497089 VPS8Q8N3P4 1428 aa10.16□□□□□ -0.78
HOXA9-206ENST00000497089 CCNB3Q8WWL7 1395 aa10.15□□□□□ -0.78
HOXA9-206ENST00000497089 FER1L4A9Z1Z3 1794 aa10.15□□□□□ -0.78
HOXA9-206ENST00000497089 SYCP2Q9BX26 1530 aa10.14□□□□□ -0.79
HOXA9-206ENST00000497089 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
HOXA9-206ENST00000497089 KHSRPQ92945 711 aaKnown RBP eCLIP10.14□□□□□ -0.79
HOXA9-206ENST00000497089 ANO8Q9HCE9 1232 aaPredicted RBP10.14□□□□□ -0.79
HOXA9-206ENST00000497089 CFDP1Q9UEE9 299 aaPredicted RBP10.14□□□□□ -0.79
HOXA9-206ENST00000497089 MAP3K1Q13233 1512 aa10.13□□□□□ -0.79
HOXA9-206ENST00000497089 LMTK3Q96Q04 1460 aa10.12□□□□□ -0.79
HOXA9-206ENST00000497089 SUPT6HQ7KZ85 1726 aaKnown RBP10.12□□□□□ -0.79
HOXA9-206ENST00000497089 INO80Q9ULG1 1556 aaPredicted RBP10.12□□□□□ -0.79
HOXA9-206ENST00000497089 NUDT7P0C024 238 aa10.12□□□□□ -0.79
HOXA9-206ENST00000497089 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms