RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 IFFO2Q5TF58 517 aa11.31□□□□□ -0.6
RAB3GAP1-206ENST00000497080 KCNC4Q03721 635 aa11.29□□□□□ -0.6
RAB3GAP1-206ENST00000497080 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
RAB3GAP1-206ENST00000497080 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
RAB3GAP1-206ENST00000497080 NECTIN2Q92692 538 aa11.29□□□□□ -0.6
RAB3GAP1-206ENST00000497080 TJAP1Q5JTD0 557 aa11.27□□□□□ -0.61
RAB3GAP1-206ENST00000497080 PHOX2BQ99453 314 aa11.27□□□□□ -0.61
RAB3GAP1-206ENST00000497080 MTRQ99707 1265 aa11.26□□□□□ -0.61
RAB3GAP1-206ENST00000497080 SLC10A3P09131 477 aa11.25□□□□□ -0.61
RAB3GAP1-206ENST00000497080 IRF6O14896 467 aa11.24□□□□□ -0.61
RAB3GAP1-206ENST00000497080 MAP2K5Q13163 448 aa11.24□□□□□ -0.61
RAB3GAP1-206ENST00000497080 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
RAB3GAP1-206ENST00000497080 ZNF516Q92618 1163 aa11.23□□□□□ -0.61
RAB3GAP1-206ENST00000497080 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
RAB3GAP1-206ENST00000497080 A0A0G2JS52 829 aa11.22□□□□□ -0.61
RAB3GAP1-206ENST00000497080 MINK1Q8N4C8 1332 aaPredicted RBP11.22□□□□□ -0.61
RAB3GAP1-206ENST00000497080 IL21Q9HBE4 155 aa11.22□□□□□ -0.61
RAB3GAP1-206ENST00000497080 COPS2P61201 443 aa11.21□□□□□ -0.61
RAB3GAP1-206ENST00000497080 CFHP08603 1231 aa11.2□□□□□ -0.62
RAB3GAP1-206ENST00000497080 RSPH4AQ5TD94 716 aa11.2□□□□□ -0.62
RAB3GAP1-206ENST00000497080 PRR14Q9BWN1 585 aa11.2□□□□□ -0.62
RAB3GAP1-206ENST00000497080 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
RAB3GAP1-206ENST00000497080 KMT5BQ4FZB7 885 aa11.19□□□□□ -0.62
RAB3GAP1-206ENST00000497080 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
RAB3GAP1-206ENST00000497080 ZC3H15Q8WU90 426 aaKnown RBP11.18□□□□□ -0.62
RAB3GAP1-206ENST00000497080 ACTN4O43707 911 aaKnown RBP11.17□□□□□ -0.62
RAB3GAP1-206ENST00000497080 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
RAB3GAP1-206ENST00000497080 RDH13Q8NBN7 331 aa11.17□□□□□ -0.62
RAB3GAP1-206ENST00000497080 CCDC102AQ96A19 550 aa11.17□□□□□ -0.62
RAB3GAP1-206ENST00000497080 BLOC1S3Q6QNY0 202 aa11.16□□□□□ -0.62
RAB3GAP1-206ENST00000497080 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
RAB3GAP1-206ENST00000497080 ZMYND10O75800 440 aa11.15□□□□□ -0.62
RAB3GAP1-206ENST00000497080 MDM2Q00987 491 aaPredicted RBP11.14□□□□□ -0.63
RAB3GAP1-206ENST00000497080 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
RAB3GAP1-206ENST00000497080 ZPR1O75312 459 aa11.13□□□□□ -0.63
RAB3GAP1-206ENST00000497080 SULF1Q8IWU6 871 aa11.13□□□□□ -0.63
RAB3GAP1-206ENST00000497080 PUS10Q3MIT2 529 aaKnown RBP11.1□□□□□ -0.63
RAB3GAP1-206ENST00000497080 RGS20O76081 388 aa11.09□□□□□ -0.63
RAB3GAP1-206ENST00000497080 GCGRP47871 477 aa11.09□□□□□ -0.63
RAB3GAP1-206ENST00000497080 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
RAB3GAP1-206ENST00000497080 FUT2Q10981 343 aa11.07□□□□□ -0.64
RAB3GAP1-206ENST00000497080 SCUBE3Q8IX30 993 aa11.07□□□□□ -0.64
RAB3GAP1-206ENST00000497080 NR1I2O75469 434 aa11.06□□□□□ -0.64
RAB3GAP1-206ENST00000497080 TLL1O43897 1013 aa11.05□□□□□ -0.64
RAB3GAP1-206ENST00000497080 CLCN1P35523 988 aa11.05□□□□□ -0.64
RAB3GAP1-206ENST00000497080 GPCPD1Q9NPB8 672 aa11.05□□□□□ -0.64
RAB3GAP1-206ENST00000497080 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.05□□□□□ -0.64
RAB3GAP1-206ENST00000497080 CD46P15529 392 aa11.04□□□□□ -0.64
RAB3GAP1-206ENST00000497080 ATP6V1AP38606 617 aa11.04□□□□□ -0.64
RAB3GAP1-206ENST00000497080 MORN1Q5T089 497 aa11.03□□□□□ -0.64
RAB3GAP1-206ENST00000497080 BCANQ96GW7 911 aa11.03□□□□□ -0.64
RAB3GAP1-206ENST00000497080 TMUB1Q9BVT8 246 aa11.03□□□□□ -0.64
RAB3GAP1-206ENST00000497080 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
RAB3GAP1-206ENST00000497080 GGCXP38435 758 aa11.01□□□□□ -0.65
RAB3GAP1-206ENST00000497080 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
RAB3GAP1-206ENST00000497080 SLC27A5Q9Y2P5 690 aa11□□□□□ -0.65
RAB3GAP1-206ENST00000497080 KDM4AO75164 1064 aa10.98□□□□□ -0.65
RAB3GAP1-206ENST00000497080 ADH1BP00325 375 aa10.98□□□□□ -0.65
RAB3GAP1-206ENST00000497080 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
RAB3GAP1-206ENST00000497080 AK7Q96M32 723 aa10.98□□□□□ -0.65
RAB3GAP1-206ENST00000497080 TRIM66O15016 1216 aa10.97□□□□□ -0.65
RAB3GAP1-206ENST00000497080 S1PR4O95977 384 aa10.97□□□□□ -0.65
RAB3GAP1-206ENST00000497080 SSTR3P32745 418 aaPredicted RBP10.97□□□□□ -0.65
RAB3GAP1-206ENST00000497080 AMHR2Q16671 573 aa10.97□□□□□ -0.65
RAB3GAP1-206ENST00000497080 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
RAB3GAP1-206ENST00000497080 SPSB2Q99619 263 aa10.97□□□□□ -0.65
RAB3GAP1-206ENST00000497080 PRKD2Q9BZL6 878 aa10.97□□□□□ -0.65
RAB3GAP1-206ENST00000497080 RNF223E7ERA6 249 aa10.96□□□□□ -0.65
RAB3GAP1-206ENST00000497080 PPEF1O14829 653 aaPredicted RBP10.96□□□□□ -0.65
RAB3GAP1-206ENST00000497080 THAP11Q96EK4 314 aa10.95□□□□□ -0.66
RAB3GAP1-206ENST00000497080 SLC6A16Q9GZN6 736 aa10.95□□□□□ -0.66
RAB3GAP1-206ENST00000497080 SLC24A3Q9HC58 644 aa10.94□□□□□ -0.66
RAB3GAP1-206ENST00000497080 FMNL1O95466 1100 aaPredicted RBP10.93□□□□□ -0.66
RAB3GAP1-206ENST00000497080 USP46P62068 366 aa10.92□□□□□ -0.66
RAB3GAP1-206ENST00000497080 BRICD5Q6PL45 260 aa10.92□□□□□ -0.66
RAB3GAP1-206ENST00000497080 GIGYF2Q6Y7W6 1299 aaKnown RBP10.92□□□□□ -0.66
RAB3GAP1-206ENST00000497080 HLA-CQ95604 372 aa10.92□□□□□ -0.66
RAB3GAP1-206ENST00000497080 IRX2Q9BZI1 471 aaPredicted RBP10.92□□□□□ -0.66
RAB3GAP1-206ENST00000497080 NUTM1Q86Y26 1132 aa10.91□□□□□ -0.66
RAB3GAP1-206ENST00000497080 FAM160A2Q8N612 972 aaPredicted RBP10.91□□□□□ -0.66
RAB3GAP1-206ENST00000497080 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
RAB3GAP1-206ENST00000497080 RNF19BQ6ZMZ0 732 aa10.9□□□□□ -0.66
RAB3GAP1-206ENST00000497080 PARP9Q8IXQ6 854 aa10.9□□□□□ -0.66
RAB3GAP1-206ENST00000497080 V9GY48 417 aaPredicted RBP10.9□□□□□ -0.66
RAB3GAP1-206ENST00000497080 HOXA2O43364 376 aa10.89□□□□□ -0.67
RAB3GAP1-206ENST00000497080 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
RAB3GAP1-206ENST00000497080 GUCA2AQ02747 115 aa10.88□□□□□ -0.67
RAB3GAP1-206ENST00000497080 Q3C1V9 767 aa10.88□□□□□ -0.67
RAB3GAP1-206ENST00000497080 SLC19A1P41440 591 aa10.87□□□□□ -0.67
RAB3GAP1-206ENST00000497080 EMID1Q96A84 441 aaPredicted RBP10.87□□□□□ -0.67
RAB3GAP1-206ENST00000497080 BEGAINQ9BUH8 593 aa10.87□□□□□ -0.67
RAB3GAP1-206ENST00000497080 PDE4DQ08499 809 aa10.86□□□□□ -0.67
RAB3GAP1-206ENST00000497080 SPIRE2Q8WWL2 714 aa10.86□□□□□ -0.67
RAB3GAP1-206ENST00000497080 MS4A1P11836 297 aa10.85□□□□□ -0.67
RAB3GAP1-206ENST00000497080 PRDM9Q9NQV7 894 aa10.85□□□□□ -0.67
RAB3GAP1-206ENST00000497080 LIAT1Q6ZQX7 453 aa10.84□□□□□ -0.67
RAB3GAP1-206ENST00000497080 PLA2G2CQ5R387 149 aa10.83□□□□□ -0.68
RAB3GAP1-206ENST00000497080 SYMPKQ92797 1274 aaKnown RBP10.83□□□□□ -0.68
RAB3GAP1-206ENST00000497080 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
RAB3GAP1-206ENST00000497080 NDUFV2P19404 249 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms