RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 ADGRF5Q8IZF2 1346 aa22.87■■□□□ 1.25
HLA-A-208ENST00000496081 PPLO60437 1756 aa22.87■■□□□ 1.25
HLA-A-208ENST00000496081 KIAA1210Q9ULL0 1709 aa22.86■■□□□ 1.25
HLA-A-208ENST00000496081 NRXN1Q9ULB1 1477 aa22.86■■□□□ 1.25
HLA-A-208ENST00000496081 RPGRIP1LQ68CZ1 1315 aa22.84■■□□□ 1.25
HLA-A-208ENST00000496081 SPATA31D1Q6ZQQ2 1576 aa22.81■■□□□ 1.24
HLA-A-208ENST00000496081 IQGAP1P46940 1657 aa22.81■■□□□ 1.24
HLA-A-208ENST00000496081 ESF1Q9H501 851 aaKnown RBP22.8■■□□□ 1.24
HLA-A-208ENST00000496081 TMEM131LA2VDJ0 1609 aa22.8■■□□□ 1.24
HLA-A-208ENST00000496081 ZMYM3Q14202 1370 aa22.79■■□□□ 1.24
HLA-A-208ENST00000496081 CFAP70Q5T0N1 1121 aa22.79■■□□□ 1.24
HLA-A-208ENST00000496081 MYO5BQ9ULV0 1848 aa22.79■■□□□ 1.24
HLA-A-208ENST00000496081 NEXMIFQ5QGS0 1516 aa22.79■■□□□ 1.24
HLA-A-208ENST00000496081 ANP32CO43423 234 aa22.78■■□□□ 1.24
HLA-A-208ENST00000496081 PIK3C2GO75747 1445 aa22.77■■□□□ 1.24
HLA-A-208ENST00000496081 SCAF11Q99590 1463 aaKnown RBP22.76■■□□□ 1.23
HLA-A-208ENST00000496081 TESK2Q96S53 571 aa22.76■■□□□ 1.23
HLA-A-208ENST00000496081 VGFO15240 615 aaPredicted RBP22.73■■□□□ 1.23
HLA-A-208ENST00000496081 POLR3GLQ9BT43 218 aa22.73■■□□□ 1.23
HLA-A-208ENST00000496081 ZFYVE9O95405 1425 aa22.71■■□□□ 1.23
HLA-A-208ENST00000496081 C14orf93Q9H972 538 aaKnown RBP22.71■■□□□ 1.23
HLA-A-208ENST00000496081 SETBP1Q9Y6X0 1596 aa22.71■■□□□ 1.23
HLA-A-208ENST00000496081 NUTM2DQ5VT03 806 aaPredicted RBP22.71■■□□□ 1.23
HLA-A-208ENST00000496081 YTHDC1Q96MU7 727 aaKnown RBP22.68■■□□□ 1.22
HLA-A-208ENST00000496081 STAG3Q9UJ98 1225 aa22.68■■□□□ 1.22
HLA-A-208ENST00000496081 EIF3AQ14152 1382 aaKnown RBP22.67■■□□□ 1.22
HLA-A-208ENST00000496081 DISP3Q9P2K9 1392 aa22.67■■□□□ 1.22
HLA-A-208ENST00000496081 A2ML1A8K2U0 1454 aa22.67■■□□□ 1.22
HLA-A-208ENST00000496081 ADGRB1O14514 1584 aa22.67■■□□□ 1.22
HLA-A-208ENST00000496081 CCER2I3L3R5 266 aa22.66■■□□□ 1.22
HLA-A-208ENST00000496081 TMF1P82094 1093 aa22.65■■□□□ 1.22
HLA-A-208ENST00000496081 TNRQ92752 1358 aa22.64■■□□□ 1.21
HLA-A-208ENST00000496081 FER1L4A9Z1Z3 1794 aa22.62■■□□□ 1.21
HLA-A-208ENST00000496081 ADAMTSL3P82987 1691 aa22.61■■□□□ 1.21
HLA-A-208ENST00000496081 KDM4FA0A1W2PPD8 638 aa22.61■■□□□ 1.21
HLA-A-208ENST00000496081 TMEM132EQ6IEE7 984 aa22.61■■□□□ 1.21
HLA-A-208ENST00000496081 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
HLA-A-208ENST00000496081 MYO3AQ8NEV4 1616 aa22.6■■□□□ 1.21
HLA-A-208ENST00000496081 C3P01024 1663 aa22.59■■□□□ 1.21
HLA-A-208ENST00000496081 PRKRIP1Q9H875 184 aaPredicted RBP22.59■■□□□ 1.21
HLA-A-208ENST00000496081 CEBPAP49715 358 aaPredicted RBP22.58■■□□□ 1.21
HLA-A-208ENST00000496081 RIMS2Q9UQ26 1411 aa22.58■■□□□ 1.2
HLA-A-208ENST00000496081 RIMS1Q86UR5 1692 aaKnown RBP22.58■■□□□ 1.2
HLA-A-208ENST00000496081 TRAK1Q9UPV9 953 aa22.56■■□□□ 1.2
HLA-A-208ENST00000496081 KDM5AP29375 1690 aaKnown RBP22.56■■□□□ 1.2
HLA-A-208ENST00000496081 CENPBP07199 599 aaPredicted RBP22.55■■□□□ 1.2
HLA-A-208ENST00000496081 ASXL1Q8IXJ9 1541 aa22.54■■□□□ 1.2
HLA-A-208ENST00000496081 SLC24A1O60721 1099 aa22.54■■□□□ 1.2
HLA-A-208ENST00000496081 UBR1Q8IWV7 1749 aa22.54■■□□□ 1.2
HLA-A-208ENST00000496081 CDCA8Q53HL2 280 aa22.53■■□□□ 1.2
HLA-A-208ENST00000496081 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
HLA-A-208ENST00000496081 CENPJQ9HC77 1338 aaPredicted RBP22.53■■□□□ 1.2
HLA-A-208ENST00000496081 SBNO2Q9Y2G9 1366 aa22.53■■□□□ 1.2
HLA-A-208ENST00000496081 ALKQ9UM73 1620 aa22.52■■□□□ 1.2
HLA-A-208ENST00000496081 NLRP1Q9C000 1473 aa22.52■■□□□ 1.2
HLA-A-208ENST00000496081 ARHGEF28Q8N1W1 1705 aaKnown RBP22.51■■□□□ 1.19
HLA-A-208ENST00000496081 QRICH2Q9H0J4 1663 aa22.5■■□□□ 1.19
HLA-A-208ENST00000496081 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.5■■□□□ 1.19
HLA-A-208ENST00000496081 PER1O15534 1290 aaPredicted RBP22.48■■□□□ 1.19
HLA-A-208ENST00000496081 TMEM2Q9UHN6 1383 aa22.47■■□□□ 1.19
HLA-A-208ENST00000496081 PTPRMP28827 1452 aa22.47■■□□□ 1.19
HLA-A-208ENST00000496081 HDGFP51858 240 aaKnown RBP22.46■■□□□ 1.19
HLA-A-208ENST00000496081 PANK3Q9H999 370 aa22.46■■□□□ 1.19
HLA-A-208ENST00000496081 SETD1AO15047 1707 aaKnown RBP22.45■■□□□ 1.18
HLA-A-208ENST00000496081 MYOM1P52179 1685 aa22.45■■□□□ 1.18
HLA-A-208ENST00000496081 YTHDC2Q9H6S0 1430 aaKnown RBP22.45■■□□□ 1.18
HLA-A-208ENST00000496081 NRXN3Q9Y4C0 1643 aa22.45■■□□□ 1.18
HLA-A-208ENST00000496081 CNGB1Q14028 1251 aaPredicted RBP22.44■■□□□ 1.18
HLA-A-208ENST00000496081 CCDC184Q52MB2 194 aa22.44■■□□□ 1.18
HLA-A-208ENST00000496081 STK26Q9P289 416 aa22.44■■□□□ 1.18
HLA-A-208ENST00000496081 KTN1Q86UP2 1357 aaKnown RBP22.39■■□□□ 1.18
HLA-A-208ENST00000496081 RALBP1Q15311 655 aa22.37■■□□□ 1.17
HLA-A-208ENST00000496081 MRS2Q9HD23 443 aa22.37■■□□□ 1.17
HLA-A-208ENST00000496081 SLIT1O75093 1534 aa22.36■■□□□ 1.17
HLA-A-208ENST00000496081 LTKP29376 864 aa22.36■■□□□ 1.17
HLA-A-208ENST00000496081 LRPPRCP42704 1394 aaKnown RBP22.36■■□□□ 1.17
HLA-A-208ENST00000496081 TULP4Q9NRJ4 1543 aa22.36■■□□□ 1.17
HLA-A-208ENST00000496081 SAFB2Q14151 953 aaKnown RBP eCLIP22.35■■□□□ 1.17
HLA-A-208ENST00000496081 PRAM1Q96QH2 718 aa22.35■■□□□ 1.17
HLA-A-208ENST00000496081 ARHGAP23Q9P227 1491 aa22.35■■□□□ 1.17
HLA-A-208ENST00000496081 METP08581 1390 aa22.35■■□□□ 1.17
HLA-A-208ENST00000496081 PARD3Q8TEW0 1356 aa22.35■■□□□ 1.17
HLA-A-208ENST00000496081 DLC1Q96QB1 1528 aa22.35■■□□□ 1.17
HLA-A-208ENST00000496081 EVC2Q86UK5 1308 aa22.34■■□□□ 1.17
HLA-A-208ENST00000496081 ABCC11Q96J66 1382 aa22.33■■□□□ 1.17
HLA-A-208ENST00000496081 PLEKHG1Q9ULL1 1385 aa22.33■■□□□ 1.17
HLA-A-208ENST00000496081 TXNDC2Q86VQ3 553 aa22.33■■□□□ 1.17
HLA-A-208ENST00000496081 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
HLA-A-208ENST00000496081 POGKQ9P215 609 aa22.33■■□□□ 1.17
HLA-A-208ENST00000496081 PUS7Q96PZ0 661 aaKnown RBP22.33■■□□□ 1.16
HLA-A-208ENST00000496081 ADAMTS13Q76LX8 1427 aa22.32■■□□□ 1.16
HLA-A-208ENST00000496081 MYBBP1AQ9BQG0 1328 aaKnown RBP22.32■■□□□ 1.16
HLA-A-208ENST00000496081 BCANQ96GW7 911 aa22.32■■□□□ 1.16
HLA-A-208ENST00000496081 KNSTRNQ9Y448 316 aa22.32■■□□□ 1.16
HLA-A-208ENST00000496081 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
HLA-A-208ENST00000496081 EID1Q9Y6B2 187 aa22.31■■□□□ 1.16
HLA-A-208ENST00000496081 CEP170BQ9Y4F5 1589 aaPredicted RBP22.31■■□□□ 1.16
HLA-A-208ENST00000496081 MINK1Q8N4C8 1332 aaPredicted RBP22.28■■□□□ 1.16
HLA-A-208ENST00000496081 AMER1Q5JTC6 1135 aaPredicted RBP22.28■■□□□ 1.16
HLA-A-208ENST00000496081 KNDC1Q76NI1 1749 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms