RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 RTN4Q9NQC3 1192 aaKnown RBP15.73■□□□□ 0.11
SMARCAL1-213ENST00000496037 TIAM1Q13009 1591 aa15.72■□□□□ 0.11
SMARCAL1-213ENST00000496037 KCNA6P17658 529 aa15.72■□□□□ 0.11
SMARCAL1-213ENST00000496037 RBM33Q96EV2 1170 aaKnown RBP15.72■□□□□ 0.11
SMARCAL1-213ENST00000496037 SLAIN2Q9P270 581 aa15.72■□□□□ 0.11
SMARCAL1-213ENST00000496037 PRDM15P57071 1507 aaPredicted RBP15.72■□□□□ 0.11
SMARCAL1-213ENST00000496037 MTUS2Q5JR59 1369 aa15.71■□□□□ 0.11
SMARCAL1-213ENST00000496037 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.1
SMARCAL1-213ENST00000496037 ZRANB1Q9UGI0 708 aa15.69■□□□□ 0.1
SMARCAL1-213ENST00000496037 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
SMARCAL1-213ENST00000496037 TMEM2Q9UHN6 1383 aa15.66■□□□□ 0.1
SMARCAL1-213ENST00000496037 NUTM2BA6NNL0 878 aaPredicted RBP15.66■□□□□ 0.1
SMARCAL1-213ENST00000496037 NUTM2EB1AL46 878 aaPredicted RBP15.66■□□□□ 0.1
SMARCAL1-213ENST00000496037 NUTM2DQ5VT03 806 aaPredicted RBP15.66■□□□□ 0.1
SMARCAL1-213ENST00000496037 NUTM2AQ8IVF1 878 aaPredicted RBP15.66■□□□□ 0.1
SMARCAL1-213ENST00000496037 RGS12O14924 1447 aa15.66■□□□□ 0.1
SMARCAL1-213ENST00000496037 NWD1Q149M9 1564 aa15.66■□□□□ 0.1
SMARCAL1-213ENST00000496037 RSPH4AQ5TD94 716 aa15.65■□□□□ 0.1
SMARCAL1-213ENST00000496037 STAG3Q9UJ98 1225 aa15.65■□□□□ 0.1
SMARCAL1-213ENST00000496037 AFF2P51816 1311 aa15.65■□□□□ 0.1
SMARCAL1-213ENST00000496037 SLC26A8Q96RN1 970 aa15.64■□□□□ 0.09
SMARCAL1-213ENST00000496037 CAMSAP2Q08AD1 1489 aa15.64■□□□□ 0.09
SMARCAL1-213ENST00000496037 ATAD2Q6PL18 1390 aa15.62■□□□□ 0.09
SMARCAL1-213ENST00000496037 AHDC1Q5TGY3 1603 aaPredicted RBP15.62■□□□□ 0.09
SMARCAL1-213ENST00000496037 POLA2Q14181 598 aa15.62■□□□□ 0.09
SMARCAL1-213ENST00000496037 KDM5AP29375 1690 aaKnown RBP15.61■□□□□ 0.09
SMARCAL1-213ENST00000496037 CEP152O94986 1710 aa15.61■□□□□ 0.09
SMARCAL1-213ENST00000496037 TSPY4P0CV99 314 aa15.61■□□□□ 0.09
SMARCAL1-213ENST00000496037 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
SMARCAL1-213ENST00000496037 RBM6P78332 1123 aaKnown RBP15.61■□□□□ 0.09
SMARCAL1-213ENST00000496037 EHBP1L1Q8N3D4 1523 aa15.61■□□□□ 0.09
SMARCAL1-213ENST00000496037 SETBP1Q9Y6X0 1596 aa15.61■□□□□ 0.09
SMARCAL1-213ENST00000496037 PIK3C2BO00750 1634 aa15.61■□□□□ 0.09
SMARCAL1-213ENST00000496037 EIF2AK4Q9P2K8 1649 aaKnown RBP15.61■□□□□ 0.09
SMARCAL1-213ENST00000496037 EFCAB6Q5THR3 1501 aa15.6■□□□□ 0.09
SMARCAL1-213ENST00000496037 BCANQ96GW7 911 aa15.59■□□□□ 0.09
SMARCAL1-213ENST00000496037 TET3O43151 1660 aa15.59■□□□□ 0.09
SMARCAL1-213ENST00000496037 MROH1Q8NDA8 1641 aa15.58■□□□□ 0.09
SMARCAL1-213ENST00000496037 C14orf37Q86TY3 774 aa15.58■□□□□ 0.08
SMARCAL1-213ENST00000496037 CFAP65Q6ZU64 1925 aaKnown RBP15.57■□□□□ 0.08
SMARCAL1-213ENST00000496037 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
SMARCAL1-213ENST00000496037 ARHGEF5Q12774 1597 aa15.57■□□□□ 0.08
SMARCAL1-213ENST00000496037 QTRT2Q9H974 415 aaKnown RBP15.56■□□□□ 0.08
SMARCAL1-213ENST00000496037 ARHGAP31Q2M1Z3 1444 aa15.56■□□□□ 0.08
SMARCAL1-213ENST00000496037 NGLY1Q96IV0 654 aa15.55■□□□□ 0.08
SMARCAL1-213ENST00000496037 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
SMARCAL1-213ENST00000496037 EP400Q96L91 3159 aa15.55■□□□□ 0.08
SMARCAL1-213ENST00000496037 CADPS2Q86UW7 1296 aa15.54■□□□□ 0.08
SMARCAL1-213ENST00000496037 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
SMARCAL1-213ENST00000496037 NCOA3Q9Y6Q9 1424 aa15.53■□□□□ 0.08
SMARCAL1-213ENST00000496037 ATF3P18847 181 aa15.53■□□□□ 0.08
SMARCAL1-213ENST00000496037 MAST1Q9Y2H9 1570 aa15.5■□□□□ 0.07
SMARCAL1-213ENST00000496037 ADGRB3O60242 1522 aa15.48■□□□□ 0.07
SMARCAL1-213ENST00000496037 IDI1Q13907 227 aa15.48■□□□□ 0.07
SMARCAL1-213ENST00000496037 BRINP3Q76B58 766 aa15.48■□□□□ 0.07
SMARCAL1-213ENST00000496037 CCDC125Q86Z20 511 aa15.48■□□□□ 0.07
SMARCAL1-213ENST00000496037 SETD5Q9C0A6 1442 aa15.47■□□□□ 0.07
SMARCAL1-213ENST00000496037 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
SMARCAL1-213ENST00000496037 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.47■□□□□ 0.07
SMARCAL1-213ENST00000496037 DUOX2Q9NRD8 1548 aa15.47■□□□□ 0.07
SMARCAL1-213ENST00000496037 CHD2O14647 1828 aaKnown RBP15.46■□□□□ 0.07
SMARCAL1-213ENST00000496037 ASXL1Q8IXJ9 1541 aa15.45■□□□□ 0.06
SMARCAL1-213ENST00000496037 PPP1R15AO75807 674 aaPredicted RBP15.45■□□□□ 0.06
SMARCAL1-213ENST00000496037 PLEKHG1Q9ULL1 1385 aa15.45■□□□□ 0.06
SMARCAL1-213ENST00000496037 LRP5O75197 1615 aa15.44■□□□□ 0.06
SMARCAL1-213ENST00000496037 LRRC59Q96AG4 307 aaKnown RBP15.44■□□□□ 0.06
SMARCAL1-213ENST00000496037 KANK1Q14678 1352 aa15.44■□□□□ 0.06
SMARCAL1-213ENST00000496037 TRPC5Q9UL62 973 aaPredicted RBP15.42■□□□□ 0.06
SMARCAL1-213ENST00000496037 PNPLA6Q8IY17 1366 aa15.41■□□□□ 0.06
SMARCAL1-213ENST00000496037 ADAMTS2O95450 1211 aa15.41■□□□□ 0.06
SMARCAL1-213ENST00000496037 USP21Q9UK80 565 aa15.41■□□□□ 0.06
SMARCAL1-213ENST00000496037 ERBINQ96RT1 1412 aa15.41■□□□□ 0.06
SMARCAL1-213ENST00000496037 NHSL1Q5SYE7 1610 aa15.4■□□□□ 0.06
SMARCAL1-213ENST00000496037 HDGFP51858 240 aaKnown RBP15.4■□□□□ 0.06
SMARCAL1-213ENST00000496037 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
SMARCAL1-213ENST00000496037 DCCP43146 1447 aa15.4■□□□□ 0.06
SMARCAL1-213ENST00000496037 TBX22Q9Y458 520 aa15.39■□□□□ 0.05
SMARCAL1-213ENST00000496037 KIF15Q9NS87 1388 aa15.38■□□□□ 0.05
SMARCAL1-213ENST00000496037 ZFYVE9O95405 1425 aa15.38■□□□□ 0.05
SMARCAL1-213ENST00000496037 SLC52A1Q9NWF4 448 aa15.38■□□□□ 0.05
SMARCAL1-213ENST00000496037 RIMS2Q9UQ26 1411 aa15.37■□□□□ 0.05
SMARCAL1-213ENST00000496037 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
SMARCAL1-213ENST00000496037 NOS1P29475 1434 aa15.36■□□□□ 0.05
SMARCAL1-213ENST00000496037 LMTK2Q8IWU2 1503 aa15.36■□□□□ 0.05
SMARCAL1-213ENST00000496037 ATRNO75882 1429 aa15.35■□□□□ 0.05
SMARCAL1-213ENST00000496037 BLMP54132 1417 aaPredicted RBP15.35■□□□□ 0.05
SMARCAL1-213ENST00000496037 MST1RQ04912 1400 aa15.34■□□□□ 0.05
SMARCAL1-213ENST00000496037 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
SMARCAL1-213ENST00000496037 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMARCAL1-213ENST00000496037 PTCH1Q13635 1447 aa15.32■□□□□ 0.04
SMARCAL1-213ENST00000496037 ADAMTS13Q76LX8 1427 aa15.32■□□□□ 0.04
SMARCAL1-213ENST00000496037 FNBP4Q8N3X1 1017 aaPredicted RBP15.31■□□□□ 0.04
SMARCAL1-213ENST00000496037 DDX17Q92841 729 aaKnown RBP15.31■□□□□ 0.04
SMARCAL1-213ENST00000496037 RRP7BPQ9NSQ0 103 aa15.31■□□□□ 0.04
SMARCAL1-213ENST00000496037 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
SMARCAL1-213ENST00000496037 TRPM2O94759 1503 aa15.31■□□□□ 0.04
SMARCAL1-213ENST00000496037 DEFB132Q7Z7B7 95 aa15.3■□□□□ 0.04
SMARCAL1-213ENST00000496037 AMOTL2Q9Y2J4 779 aa15.3■□□□□ 0.04
SMARCAL1-213ENST00000496037 GCC2Q8IWJ2 1684 aa15.29■□□□□ 0.04
SMARCAL1-213ENST00000496037 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms