RNA–Protein interactions for RNA: ENST00000496000.1

RUNDC3B-208, Transcript of RUN domain containing 3B, humanhuman

TSL 4

Gene RUNDC3B, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-208ENST00000496000 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
RUNDC3B-208ENST00000496000 TPM2P07951 284 aa11.3□□□□□ -0.6
RUNDC3B-208ENST00000496000 RSPH4AQ5TD94 716 aa11.3□□□□□ -0.6
RUNDC3B-208ENST00000496000 PMFBP1Q8TBY8 1022 aa11.3□□□□□ -0.6
RUNDC3B-208ENST00000496000 ST20-MTHFSA0A0A6YYL1 179 aa11.29□□□□□ -0.6
RUNDC3B-208ENST00000496000 FRAT2O75474 233 aaPredicted RBP11.29□□□□□ -0.6
RUNDC3B-208ENST00000496000 MRE11P49959 708 aa11.29□□□□□ -0.6
RUNDC3B-208ENST00000496000 PDE3AQ14432 1141 aa11.29□□□□□ -0.6
RUNDC3B-208ENST00000496000 HSP90AA2PQ14568 343 aaPredicted RBP11.29□□□□□ -0.6
RUNDC3B-208ENST00000496000 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
RUNDC3B-208ENST00000496000 SCAPERQ9BY12 1400 aa11.28□□□□□ -0.6
RUNDC3B-208ENST00000496000 GLI2P10070 1586 aa11.28□□□□□ -0.6
RUNDC3B-208ENST00000496000 NUP155O75694 1391 aa11.28□□□□□ -0.6
RUNDC3B-208ENST00000496000 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
RUNDC3B-208ENST00000496000 CD109Q6YHK3 1445 aa11.27□□□□□ -0.6
RUNDC3B-208ENST00000496000 E9PSI1 815 aa11.27□□□□□ -0.61
RUNDC3B-208ENST00000496000 NAP1L5Q96NT1 182 aaPredicted RBP11.27□□□□□ -0.61
RUNDC3B-208ENST00000496000 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
RUNDC3B-208ENST00000496000 NKTRP30414 1462 aaKnown RBP11.26□□□□□ -0.61
RUNDC3B-208ENST00000496000 TSPY4P0CV99 314 aa11.26□□□□□ -0.61
RUNDC3B-208ENST00000496000 TSPY10P0CW01 314 aa11.26□□□□□ -0.61
RUNDC3B-208ENST00000496000 ANP32BQ92688 251 aaKnown RBP11.26□□□□□ -0.61
RUNDC3B-208ENST00000496000 MAP7D2Q96T17 732 aa11.26□□□□□ -0.61
RUNDC3B-208ENST00000496000 SKOR2Q2VWA4 1001 aaPredicted RBP11.25□□□□□ -0.61
RUNDC3B-208ENST00000496000 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
RUNDC3B-208ENST00000496000 ERBINQ96RT1 1412 aa11.25□□□□□ -0.61
RUNDC3B-208ENST00000496000 PRDM15P57071 1507 aaPredicted RBP11.25□□□□□ -0.61
RUNDC3B-208ENST00000496000 PLXNC1O60486 1568 aa11.24□□□□□ -0.61
RUNDC3B-208ENST00000496000 CHMP5Q9NZZ3 219 aa11.24□□□□□ -0.61
RUNDC3B-208ENST00000496000 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
RUNDC3B-208ENST00000496000 CENPJQ9HC77 1338 aaPredicted RBP11.24□□□□□ -0.61
RUNDC3B-208ENST00000496000 C9orf84Q5VXU9 1444 aa11.24□□□□□ -0.61
RUNDC3B-208ENST00000496000 VIRMAQ69YN4 1812 aaKnown RBP11.23□□□□□ -0.61
RUNDC3B-208ENST00000496000 PER1O15534 1290 aaPredicted RBP11.23□□□□□ -0.61
RUNDC3B-208ENST00000496000 MTERF4Q7Z6M4 381 aaKnown RBP11.23□□□□□ -0.61
RUNDC3B-208ENST00000496000 CCDC141Q6ZP82 1450 aa11.23□□□□□ -0.61
RUNDC3B-208ENST00000496000 GPATCH8Q9UKJ3 1502 aaKnown RBP11.23□□□□□ -0.61
RUNDC3B-208ENST00000496000 ARHGEF5Q12774 1597 aa11.23□□□□□ -0.61
RUNDC3B-208ENST00000496000 TRPM1Q7Z4N2 1603 aa11.23□□□□□ -0.61
RUNDC3B-208ENST00000496000 CANXP27824 592 aaKnown RBP11.22□□□□□ -0.61
RUNDC3B-208ENST00000496000 TERF1P54274 439 aa11.22□□□□□ -0.61
RUNDC3B-208ENST00000496000 DUSP27Q5VZP5 1158 aa11.22□□□□□ -0.61
RUNDC3B-208ENST00000496000 DCAF11Q8TEB1 546 aa11.22□□□□□ -0.61
RUNDC3B-208ENST00000496000 KIF13AQ9H1H9 1805 aa11.22□□□□□ -0.61
RUNDC3B-208ENST00000496000 MYH16Q9H6N6 1097 aa11.22□□□□□ -0.61
RUNDC3B-208ENST00000496000 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
RUNDC3B-208ENST00000496000 FSD2A1L4K1 749 aa11.21□□□□□ -0.61
RUNDC3B-208ENST00000496000 SLFN5Q08AF3 891 aa11.21□□□□□ -0.61
RUNDC3B-208ENST00000496000 CNGB1Q14028 1251 aaPredicted RBP11.21□□□□□ -0.61
RUNDC3B-208ENST00000496000 NCBP3Q53F19 620 aaKnown RBP11.21□□□□□ -0.61
RUNDC3B-208ENST00000496000 CFAP44Q96MT7 982 aa11.21□□□□□ -0.61
RUNDC3B-208ENST00000496000 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
RUNDC3B-208ENST00000496000 ZNF521Q96K83 1311 aa11.2□□□□□ -0.62
RUNDC3B-208ENST00000496000 RGS3P49796 1198 aa11.2□□□□□ -0.62
RUNDC3B-208ENST00000496000 CDCA7LQ96GN5 454 aa11.2□□□□□ -0.62
RUNDC3B-208ENST00000496000 GBP4Q96PP9 640 aa11.2□□□□□ -0.62
RUNDC3B-208ENST00000496000 SYNMO15061 1565 aa11.2□□□□□ -0.62
RUNDC3B-208ENST00000496000 GOLGA6L22H0YM25 854 aa11.19□□□□□ -0.62
RUNDC3B-208ENST00000496000 PLIN1O60240 522 aa11.19□□□□□ -0.62
RUNDC3B-208ENST00000496000 HSCBQ8IWL3 235 aa11.19□□□□□ -0.62
RUNDC3B-208ENST00000496000 CLUAP1Q96AJ1 413 aa11.19□□□□□ -0.62
RUNDC3B-208ENST00000496000 RWDD1Q9H446 243 aaPredicted RBP11.19□□□□□ -0.62
RUNDC3B-208ENST00000496000 ABCA9Q8IUA7 1624 aa11.19□□□□□ -0.62
RUNDC3B-208ENST00000496000 MAP3K4Q9Y6R4 1608 aa11.19□□□□□ -0.62
RUNDC3B-208ENST00000496000 SLC4A3P48751 1232 aa11.18□□□□□ -0.62
RUNDC3B-208ENST00000496000 EFCAB2Q5VUJ9 269 aa11.18□□□□□ -0.62
RUNDC3B-208ENST00000496000 PDCL3Q9H2J4 239 aa11.18□□□□□ -0.62
RUNDC3B-208ENST00000496000 CFAP74Q9C0B2 1584 aa11.18□□□□□ -0.62
RUNDC3B-208ENST00000496000 MCM4P33991 863 aa11.17□□□□□ -0.62
RUNDC3B-208ENST00000496000 TRMT2AQ8IZ69 625 aaKnown RBP11.17□□□□□ -0.62
RUNDC3B-208ENST00000496000 TBC1D32Q96NH3 1257 aa11.17□□□□□ -0.62
RUNDC3B-208ENST00000496000 PANK3Q9H999 370 aa11.17□□□□□ -0.62
RUNDC3B-208ENST00000496000 ASXL1Q8IXJ9 1541 aa11.17□□□□□ -0.62
RUNDC3B-208ENST00000496000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.17□□□□□ -0.62
RUNDC3B-208ENST00000496000 ATP10AO60312 1499 aa11.17□□□□□ -0.62
RUNDC3B-208ENST00000496000 NEO1Q92859 1461 aa11.17□□□□□ -0.62
RUNDC3B-208ENST00000496000 ARHGAP5Q13017 1502 aa11.16□□□□□ -0.62
RUNDC3B-208ENST00000496000 FAM135AQ9P2D6 1515 aa11.16□□□□□ -0.62
RUNDC3B-208ENST00000496000 CT47B1P0C2W7 299 aaPredicted RBP11.16□□□□□ -0.62
RUNDC3B-208ENST00000496000 CC2D1BQ5T0F9 858 aaKnown RBP11.16□□□□□ -0.62
RUNDC3B-208ENST00000496000 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.16□□□□□ -0.62
RUNDC3B-208ENST00000496000 POGKQ9P215 609 aa11.16□□□□□ -0.62
RUNDC3B-208ENST00000496000 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
RUNDC3B-208ENST00000496000 FANCAO15360 1455 aa11.16□□□□□ -0.62
RUNDC3B-208ENST00000496000 ESPNB1AK53 854 aa11.15□□□□□ -0.62
RUNDC3B-208ENST00000496000 PPP2R1AP30153 589 aa11.15□□□□□ -0.62
RUNDC3B-208ENST00000496000 CCDC173Q0VFZ6 552 aa11.15□□□□□ -0.62
RUNDC3B-208ENST00000496000 VSIG10Q8N0Z9 540 aa11.15□□□□□ -0.62
RUNDC3B-208ENST00000496000 CHMP4BQ9H444 224 aaKnown RBP11.15□□□□□ -0.62
RUNDC3B-208ENST00000496000 RRAGDQ9NQL2 400 aaPredicted RBP11.15□□□□□ -0.62
RUNDC3B-208ENST00000496000 TRAK2O60296 914 aa11.14□□□□□ -0.63
RUNDC3B-208ENST00000496000 HS1BP3Q53T59 392 aa11.14□□□□□ -0.63
RUNDC3B-208ENST00000496000 ANTXR1Q9H6X2 564 aa11.14□□□□□ -0.63
RUNDC3B-208ENST00000496000 ZNF777Q9ULD5 760 aaPredicted RBP11.14□□□□□ -0.63
RUNDC3B-208ENST00000496000 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
RUNDC3B-208ENST00000496000 PLCH2O75038 1416 aa11.14□□□□□ -0.63
RUNDC3B-208ENST00000496000 TTC37Q6PGP7 1564 aa11.14□□□□□ -0.63
RUNDC3B-208ENST00000496000 KIF16BQ96L93 1317 aa11.13□□□□□ -0.63
RUNDC3B-208ENST00000496000 UNC13BO14795 1591 aa11.13□□□□□ -0.63
RUNDC3B-208ENST00000496000 NCLP19338 710 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms