RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 EIF3AQ14152 1382 aaKnown RBP13.15□□□□□ -0.3
SURF1-204ENST00000495952 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
SURF1-204ENST00000495952 CDCA8Q53HL2 280 aa13.14□□□□□ -0.31
SURF1-204ENST00000495952 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
SURF1-204ENST00000495952 VIRMAQ69YN4 1812 aaKnown RBP13.13□□□□□ -0.31
SURF1-204ENST00000495952 MROH2AA6NES4 1674 aa13.13□□□□□ -0.31
SURF1-204ENST00000495952 PPLO60437 1756 aa13.12□□□□□ -0.31
SURF1-204ENST00000495952 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
SURF1-204ENST00000495952 KIDINS220Q9ULH0 1771 aa13.12□□□□□ -0.31
SURF1-204ENST00000495952 NRXN1Q9ULB1 1477 aa13.11□□□□□ -0.31
SURF1-204ENST00000495952 KANK1Q14678 1352 aa13.11□□□□□ -0.31
SURF1-204ENST00000495952 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
SURF1-204ENST00000495952 PPRC1Q5VV67 1664 aaKnown RBP13.11□□□□□ -0.31
SURF1-204ENST00000495952 SBNO2Q9Y2G9 1366 aa13.1□□□□□ -0.31
SURF1-204ENST00000495952 ADGRB3O60242 1522 aa13.1□□□□□ -0.31
SURF1-204ENST00000495952 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
SURF1-204ENST00000495952 MS4A1P11836 297 aa13.1□□□□□ -0.31
SURF1-204ENST00000495952 NOP58Q9Y2X3 529 aaKnown RBP13.1□□□□□ -0.31
SURF1-204ENST00000495952 FANCAO15360 1455 aa13.1□□□□□ -0.31
SURF1-204ENST00000495952 ANP32AP39687 249 aaKnown RBP13.09□□□□□ -0.31
SURF1-204ENST00000495952 SPAG9O60271 1321 aaKnown RBP13.09□□□□□ -0.31
SURF1-204ENST00000495952 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
SURF1-204ENST00000495952 QRICH2Q9H0J4 1663 aa13.06□□□□□ -0.32
SURF1-204ENST00000495952 RGL3Q3MIN7 710 aa13.06□□□□□ -0.32
SURF1-204ENST00000495952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
SURF1-204ENST00000495952 PANK3Q9H999 370 aa13.06□□□□□ -0.32
SURF1-204ENST00000495952 ADGRL1O94910 1474 aa13.05□□□□□ -0.32
SURF1-204ENST00000495952 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
SURF1-204ENST00000495952 IPO9Q96P70 1041 aaKnown RBP13.05□□□□□ -0.32
SURF1-204ENST00000495952 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
SURF1-204ENST00000495952 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
SURF1-204ENST00000495952 SHPRHQ149N8 1683 aa13.03□□□□□ -0.32
SURF1-204ENST00000495952 ZNF521Q96K83 1311 aa13.02□□□□□ -0.33
SURF1-204ENST00000495952 PIK3C2BO00750 1634 aa13.02□□□□□ -0.33
SURF1-204ENST00000495952 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
SURF1-204ENST00000495952 EXOC6Q8TAG9 804 aa13.01□□□□□ -0.33
SURF1-204ENST00000495952 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
SURF1-204ENST00000495952 CAMSAP1Q5T5Y3 1602 aa13□□□□□ -0.33
SURF1-204ENST00000495952 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
SURF1-204ENST00000495952 PPP2R1AP30153 589 aa13□□□□□ -0.33
SURF1-204ENST00000495952 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
SURF1-204ENST00000495952 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
SURF1-204ENST00000495952 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
SURF1-204ENST00000495952 ANKRD26Q9UPS8 1709 aa12.99□□□□□ -0.33
SURF1-204ENST00000495952 WDR43Q15061 677 aaKnown RBP eCLIP12.98□□□□□ -0.33
SURF1-204ENST00000495952 FRMPD1Q5SYB0 1578 aa12.98□□□□□ -0.33
SURF1-204ENST00000495952 MLH3Q9UHC1 1453 aa12.97□□□□□ -0.33
SURF1-204ENST00000495952 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.97□□□□□ -0.33
SURF1-204ENST00000495952 ADGRB1O14514 1584 aa12.97□□□□□ -0.33
SURF1-204ENST00000495952 NKTRP30414 1462 aaKnown RBP12.97□□□□□ -0.33
SURF1-204ENST00000495952 PLEKHH1Q9ULM0 1364 aa12.96□□□□□ -0.33
SURF1-204ENST00000495952 UGGT1Q9NYU2 1555 aa12.96□□□□□ -0.33
SURF1-204ENST00000495952 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
SURF1-204ENST00000495952 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
SURF1-204ENST00000495952 POLR3AO14802 1390 aaPredicted RBP12.95□□□□□ -0.34
SURF1-204ENST00000495952 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
SURF1-204ENST00000495952 ASXL2Q76L83 1435 aa12.95□□□□□ -0.34
SURF1-204ENST00000495952 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
SURF1-204ENST00000495952 GLI2P10070 1586 aa12.94□□□□□ -0.34
SURF1-204ENST00000495952 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
SURF1-204ENST00000495952 DUSP27Q5VZP5 1158 aa12.94□□□□□ -0.34
SURF1-204ENST00000495952 CDCA7LQ96GN5 454 aa12.94□□□□□ -0.34
SURF1-204ENST00000495952 CLTCQ00610 1675 aaKnown RBP12.93□□□□□ -0.34
SURF1-204ENST00000495952 IQSEC2Q5JU85 1478 aa12.93□□□□□ -0.34
SURF1-204ENST00000495952 PDE4AP27815 886 aa12.93□□□□□ -0.34
SURF1-204ENST00000495952 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
SURF1-204ENST00000495952 CENPQQ7L2Z9 268 aaPredicted RBP12.93□□□□□ -0.34
SURF1-204ENST00000495952 TRMT2AQ8IZ69 625 aaKnown RBP12.93□□□□□ -0.34
SURF1-204ENST00000495952 DDRGK1Q96HY6 314 aa12.93□□□□□ -0.34
SURF1-204ENST00000495952 ADAMTS8Q9UP79 889 aa12.93□□□□□ -0.34
SURF1-204ENST00000495952 ABCC3O15438 1527 aa12.93□□□□□ -0.34
SURF1-204ENST00000495952 ADGRB2O60241 1585 aa12.92□□□□□ -0.34
SURF1-204ENST00000495952 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
SURF1-204ENST00000495952 SIGLEC1Q9BZZ2 1709 aa12.92□□□□□ -0.34
SURF1-204ENST00000495952 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
SURF1-204ENST00000495952 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
SURF1-204ENST00000495952 AFAP1Q8N556 730 aa12.91□□□□□ -0.34
SURF1-204ENST00000495952 PUS7Q96PZ0 661 aaKnown RBP12.91□□□□□ -0.34
SURF1-204ENST00000495952 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
SURF1-204ENST00000495952 RPGRIP1LQ68CZ1 1315 aa12.9□□□□□ -0.34
SURF1-204ENST00000495952 SLFN5Q08AF3 891 aa12.9□□□□□ -0.34
SURF1-204ENST00000495952 NSD2O96028 1365 aa12.9□□□□□ -0.34
SURF1-204ENST00000495952 RICTORQ6R327 1708 aa12.9□□□□□ -0.34
SURF1-204ENST00000495952 NEO1Q92859 1461 aa12.9□□□□□ -0.34
SURF1-204ENST00000495952 NEXMIFQ5QGS0 1516 aa12.89□□□□□ -0.35
SURF1-204ENST00000495952 ZMYM3Q14202 1370 aa12.89□□□□□ -0.35
SURF1-204ENST00000495952 NPATQ14207 1427 aa12.88□□□□□ -0.35
SURF1-204ENST00000495952 KIF3BO15066 747 aa12.88□□□□□ -0.35
SURF1-204ENST00000495952 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
SURF1-204ENST00000495952 DIP2CQ9Y2E4 1556 aa12.88□□□□□ -0.35
SURF1-204ENST00000495952 NOS1P29475 1434 aa12.88□□□□□ -0.35
SURF1-204ENST00000495952 ARHGAP31Q2M1Z3 1444 aa12.88□□□□□ -0.35
SURF1-204ENST00000495952 E9PSI1 815 aa12.87□□□□□ -0.35
SURF1-204ENST00000495952 AAMPQ13685 434 aa12.87□□□□□ -0.35
SURF1-204ENST00000495952 PPM1GO15355 546 aaPredicted RBP12.86□□□□□ -0.35
SURF1-204ENST00000495952 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
SURF1-204ENST00000495952 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
SURF1-204ENST00000495952 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
SURF1-204ENST00000495952 PREX1Q8TCU6 1659 aa12.86□□□□□ -0.35
SURF1-204ENST00000495952 CENPJQ9HC77 1338 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms