RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 ADGRB3O60242 1522 aa15.45■□□□□ 0.06
ZIC4-216ENST00000494569 AGLP35573 1532 aa15.44■□□□□ 0.06
ZIC4-216ENST00000494569 ABCC3O15438 1527 aa15.44■□□□□ 0.06
ZIC4-216ENST00000494569 KIF7Q2M1P5 1343 aa15.43■□□□□ 0.06
ZIC4-216ENST00000494569 KANK1Q14678 1352 aa15.42■□□□□ 0.06
ZIC4-216ENST00000494569 MYOM2P54296 1465 aa15.41■□□□□ 0.06
ZIC4-216ENST00000494569 C3P01024 1663 aa15.41■□□□□ 0.06
ZIC4-216ENST00000494569 SOCS7O14512 581 aa15.41■□□□□ 0.06
ZIC4-216ENST00000494569 DCAF11Q8TEB1 546 aa15.4■□□□□ 0.06
ZIC4-216ENST00000494569 SPATA31D1Q6ZQQ2 1576 aa15.4■□□□□ 0.06
ZIC4-216ENST00000494569 MLECQ14165 292 aa15.4■□□□□ 0.06
ZIC4-216ENST00000494569 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
ZIC4-216ENST00000494569 UGGT1Q9NYU2 1555 aa15.39■□□□□ 0.05
ZIC4-216ENST00000494569 KIF3BO15066 747 aa15.39■□□□□ 0.05
ZIC4-216ENST00000494569 SYNMO15061 1565 aa15.39■□□□□ 0.05
ZIC4-216ENST00000494569 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.05
ZIC4-216ENST00000494569 SETBP1Q9Y6X0 1596 aa15.38■□□□□ 0.05
ZIC4-216ENST00000494569 DISP3Q9P2K9 1392 aa15.37■□□□□ 0.05
ZIC4-216ENST00000494569 NPATQ14207 1427 aa15.37■□□□□ 0.05
ZIC4-216ENST00000494569 ARHGAP31Q2M1Z3 1444 aa15.37■□□□□ 0.05
ZIC4-216ENST00000494569 STAC3Q96MF2 364 aa15.36■□□□□ 0.05
ZIC4-216ENST00000494569 NOS1P29475 1434 aa15.36■□□□□ 0.05
ZIC4-216ENST00000494569 BCL11AQ9H165 835 aa15.35■□□□□ 0.05
ZIC4-216ENST00000494569 ROCK2O75116 1388 aaKnown RBP15.35■□□□□ 0.05
ZIC4-216ENST00000494569 ANP32CO43423 234 aa15.35■□□□□ 0.05
ZIC4-216ENST00000494569 ILDR2Q71H61 639 aa15.34■□□□□ 0.05
ZIC4-216ENST00000494569 CARD11Q9BXL7 1154 aa15.33■□□□□ 0.05
ZIC4-216ENST00000494569 CEBPAP49715 358 aaPredicted RBP15.33■□□□□ 0.04
ZIC4-216ENST00000494569 MYO5BQ9ULV0 1848 aa15.33■□□□□ 0.04
ZIC4-216ENST00000494569 KDM2AQ9Y2K7 1162 aa15.32■□□□□ 0.04
ZIC4-216ENST00000494569 NBPF1Q3BBV0 1214 aa15.31■□□□□ 0.04
ZIC4-216ENST00000494569 ADGRB1O14514 1584 aa15.31■□□□□ 0.04
ZIC4-216ENST00000494569 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
ZIC4-216ENST00000494569 ZNF326Q5BKZ1 582 aaKnown RBP15.3■□□□□ 0.04
ZIC4-216ENST00000494569 ZNF142P52746 1687 aaPredicted RBP15.29■□□□□ 0.04
ZIC4-216ENST00000494569 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
ZIC4-216ENST00000494569 TESK2Q96S53 571 aa15.29■□□□□ 0.04
ZIC4-216ENST00000494569 ST20-MTHFSA0A0A6YYL1 179 aa15.28■□□□□ 0.04
ZIC4-216ENST00000494569 PRKRIP1Q9H875 184 aaPredicted RBP15.28■□□□□ 0.04
ZIC4-216ENST00000494569 NEXMIFQ5QGS0 1516 aa15.27■□□□□ 0.04
ZIC4-216ENST00000494569 ARHGEF28Q8N1W1 1705 aaKnown RBP15.27■□□□□ 0.04
ZIC4-216ENST00000494569 TMEM131LA2VDJ0 1609 aa15.27■□□□□ 0.03
ZIC4-216ENST00000494569 SCAF11Q99590 1463 aaKnown RBP15.26■□□□□ 0.03
ZIC4-216ENST00000494569 CCDC184Q52MB2 194 aa15.25■□□□□ 0.03
ZIC4-216ENST00000494569 KDM5AP29375 1690 aaKnown RBP15.25■□□□□ 0.03
ZIC4-216ENST00000494569 USP32Q8NFA0 1604 aa15.24■□□□□ 0.03
ZIC4-216ENST00000494569 PIK3C2GO75747 1445 aa15.24■□□□□ 0.03
ZIC4-216ENST00000494569 EIF5BO60841 1220 aaKnown RBP15.23■□□□□ 0.03
ZIC4-216ENST00000494569 ESF1Q9H501 851 aaKnown RBP15.23■□□□□ 0.03
ZIC4-216ENST00000494569 QRICH2Q9H0J4 1663 aa15.22■□□□□ 0.03
ZIC4-216ENST00000494569 MYT1LQ9UL68 1186 aa15.22■□□□□ 0.03
ZIC4-216ENST00000494569 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
ZIC4-216ENST00000494569 RTN4Q9NQC3 1192 aaKnown RBP15.22■□□□□ 0.03
ZIC4-216ENST00000494569 CLTCQ00610 1675 aaKnown RBP15.21■□□□□ 0.02
ZIC4-216ENST00000494569 PARD3Q8TEW0 1356 aa15.2■□□□□ 0.02
ZIC4-216ENST00000494569 ASXL1Q8IXJ9 1541 aa15.2■□□□□ 0.02
ZIC4-216ENST00000494569 KTN1Q86UP2 1357 aaKnown RBP15.19■□□□□ 0.02
ZIC4-216ENST00000494569 PER1O15534 1290 aaPredicted RBP15.19■□□□□ 0.02
ZIC4-216ENST00000494569 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
ZIC4-216ENST00000494569 SUPT16HQ9Y5B9 1047 aaKnown RBP15.19■□□□□ 0.02
ZIC4-216ENST00000494569 ADGRF5Q8IZF2 1346 aa15.18■□□□□ 0.02
ZIC4-216ENST00000494569 CFAP65Q6ZU64 1925 aaKnown RBP15.18■□□□□ 0.02
ZIC4-216ENST00000494569 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
ZIC4-216ENST00000494569 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
ZIC4-216ENST00000494569 CEP170BQ9Y4F5 1589 aaPredicted RBP15.18■□□□□ 0.02
ZIC4-216ENST00000494569 GGT6Q6P531 493 aa15.17■□□□□ 0.02
ZIC4-216ENST00000494569 ZMYM3Q14202 1370 aa15.17■□□□□ 0.02
ZIC4-216ENST00000494569 ERVK-7P63135 1459 aa15.17■□□□□ 0.02
ZIC4-216ENST00000494569 INSRP06213 1382 aa15.17■□□□□ 0.02
ZIC4-216ENST00000494569 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
ZIC4-216ENST00000494569 SBNO2Q9Y2G9 1366 aa15.15■□□□□ 0.02
ZIC4-216ENST00000494569 NRXN3Q9Y4C0 1643 aa15.13■□□□□ 0.01
ZIC4-216ENST00000494569 SHPRHQ149N8 1683 aa15.13■□□□□ 0.01
ZIC4-216ENST00000494569 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
ZIC4-216ENST00000494569 CPS1P31327 1500 aa15.11■□□□□ 0.01
ZIC4-216ENST00000494569 C14orf93Q9H972 538 aaKnown RBP15.11■□□□□ 0.01
ZIC4-216ENST00000494569 A2ML1A8K2U0 1454 aa15.11■□□□□ 0.01
ZIC4-216ENST00000494569 EIF3AQ14152 1382 aaKnown RBP15.1■□□□□ 0.01
ZIC4-216ENST00000494569 ANKRD26Q9UPS8 1709 aa15.1■□□□□ 0.01
ZIC4-216ENST00000494569 CFAP70Q5T0N1 1121 aa15.1■□□□□ 0.01
ZIC4-216ENST00000494569 ZNF335Q9H4Z2 1342 aaPredicted RBP15.1■□□□□ 0.01
ZIC4-216ENST00000494569 NCKAP5LQ9HCH0 1330 aa15.1■□□□□ 0.01
ZIC4-216ENST00000494569 TMF1P82094 1093 aa15.09■□□□□ 0.01
ZIC4-216ENST00000494569 SLC52A1Q9NWF4 448 aa15.09■□□□□ 0.01
ZIC4-216ENST00000494569 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
ZIC4-216ENST00000494569 UBAP1LF5GYI3 381 aa15.08■□□□□ 0
ZIC4-216ENST00000494569 KNDC1Q76NI1 1749 aa15.08■□□□□ 0
ZIC4-216ENST00000494569 BRD4O60885 1362 aaPredicted RBP15.07■□□□□ 0
ZIC4-216ENST00000494569 MED1Q15648 1581 aaPredicted RBP15.07■□□□□ 0
ZIC4-216ENST00000494569 IDI1Q13907 227 aa15.07■□□□□ 0
ZIC4-216ENST00000494569 RALBP1Q15311 655 aa15.06■□□□□ 0
ZIC4-216ENST00000494569 ZBED9Q6R2W3 1325 aa15.06■□□□□ 0
ZIC4-216ENST00000494569 NPC1L1Q9UHC9 1359 aa15.06■□□□□ 0
ZIC4-216ENST00000494569 TULP4Q9NRJ4 1543 aa15.06■□□□□ 0
ZIC4-216ENST00000494569 MYBBP1AQ9BQG0 1328 aaKnown RBP15.05■□□□□ -0
ZIC4-216ENST00000494569 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
ZIC4-216ENST00000494569 PNISRQ8TF01 805 aaKnown RBP15.04■□□□□ -0
ZIC4-216ENST00000494569 MRS2Q9HD23 443 aa15.04■□□□□ -0
ZIC4-216ENST00000494569 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
ZIC4-216ENST00000494569 ALKQ9UM73 1620 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms