RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SEPT9Q9UHD8 586 aaPredicted RBP5.19□□□□□ -1.58
LMNB1-207ENST00000494185 BHMG1C9JSJ3 638 aaPredicted RBP5.18□□□□□ -1.58
LMNB1-207ENST00000494185 GRIPAP1Q4V328 841 aa5.18□□□□□ -1.58
LMNB1-207ENST00000494185 POTEEQ6S8J3 1075 aa5.18□□□□□ -1.58
LMNB1-207ENST00000494185 TMEM134Q9H6X4 195 aa5.18□□□□□ -1.58
LMNB1-207ENST00000494185 HCSTQ9UBK5 93 aa5.18□□□□□ -1.58
LMNB1-207ENST00000494185 RCCD1A6NED2 376 aa5.17□□□□□ -1.58
LMNB1-207ENST00000494185 SOWAHBA6NEL2 793 aa5.17□□□□□ -1.58
LMNB1-207ENST00000494185 PPP4CP60510 307 aa5.17□□□□□ -1.58
LMNB1-207ENST00000494185 TSR3Q9UJK0 312 aaKnown RBP5.17□□□□□ -1.58
LMNB1-207ENST00000494185 TRIM66O15016 1216 aa5.16□□□□□ -1.58
LMNB1-207ENST00000494185 AMHR2Q16671 573 aa5.16□□□□□ -1.58
LMNB1-207ENST00000494185 RDH13Q8NBN7 331 aa5.16□□□□□ -1.58
LMNB1-207ENST00000494185 KCTD12Q96CX2 325 aaKnown RBP5.16□□□□□ -1.58
LMNB1-207ENST00000494185 EYA1Q99502 592 aa5.16□□□□□ -1.58
LMNB1-207ENST00000494185 NEUROD2Q15784 382 aa5.15□□□□□ -1.59
LMNB1-207ENST00000494185 FAM161AQ3B820 660 aa5.15□□□□□ -1.59
LMNB1-207ENST00000494185 SAMD7Q7Z3H4 446 aa5.15□□□□□ -1.59
LMNB1-207ENST00000494185 SMAPO00193 183 aa5.14□□□□□ -1.59
LMNB1-207ENST00000494185 BRPF1P55201 1214 aaPredicted RBP5.14□□□□□ -1.59
LMNB1-207ENST00000494185 MDM2Q00987 491 aaPredicted RBP5.14□□□□□ -1.59
LMNB1-207ENST00000494185 PDE4DQ08499 809 aa5.14□□□□□ -1.59
LMNB1-207ENST00000494185 SWT1Q5T5J6 900 aaKnown RBP5.14□□□□□ -1.59
LMNB1-207ENST00000494185 THSD4Q6ZMP0 1018 aa5.14□□□□□ -1.59
LMNB1-207ENST00000494185 FAM198AQ9UFP1 575 aa5.14□□□□□ -1.59
LMNB1-207ENST00000494185 HPS5Q9UPZ3 1129 aa5.14□□□□□ -1.59
LMNB1-207ENST00000494185 DDX11L8A8MPP1 907 aa5.13□□□□□ -1.59
LMNB1-207ENST00000494185 USP46P62068 366 aa5.13□□□□□ -1.59
LMNB1-207ENST00000494185 DDRGK1Q96HY6 314 aa5.13□□□□□ -1.59
LMNB1-207ENST00000494185 NUTM1Q86Y26 1132 aa5.12□□□□□ -1.59
LMNB1-207ENST00000494185 RSPH6AQ9H0K4 717 aa5.12□□□□□ -1.59
LMNB1-207ENST00000494185 CFHP08603 1231 aa5.11□□□□□ -1.59
LMNB1-207ENST00000494185 PTPN5P54829 565 aa5.11□□□□□ -1.59
LMNB1-207ENST00000494185 GIGYF2Q6Y7W6 1299 aaKnown RBP5.11□□□□□ -1.59
LMNB1-207ENST00000494185 PARP9Q8IXQ6 854 aa5.11□□□□□ -1.59
LMNB1-207ENST00000494185 PHOX2BQ99453 314 aa5.11□□□□□ -1.59
LMNB1-207ENST00000494185 C3orf80F5H4A9 247 aa5.1□□□□□ -1.59
LMNB1-207ENST00000494185 NR1I2O75469 434 aa5.1□□□□□ -1.59
LMNB1-207ENST00000494185 BCAMP50895 628 aa5.1□□□□□ -1.59
LMNB1-207ENST00000494185 KDM4CQ9H3R0 1056 aa5.1□□□□□ -1.59
LMNB1-207ENST00000494185 GPBP1L1Q9HC44 474 aaPredicted RBP5.1□□□□□ -1.59
LMNB1-207ENST00000494185 SSTR3P32745 418 aaPredicted RBP5.09□□□□□ -1.59
LMNB1-207ENST00000494185 Q3C1V9 767 aa5.09□□□□□ -1.59
LMNB1-207ENST00000494185 NLRP7Q8WX94 980 aa5.09□□□□□ -1.59
LMNB1-207ENST00000494185 FAM217BQ9NTX9 383 aaPredicted RBP5.09□□□□□ -1.59
LMNB1-207ENST00000494185 ATP1B4Q9UN42 357 aaPredicted RBP5.09□□□□□ -1.59
LMNB1-207ENST00000494185 PCDHB3Q9Y5E6 796 aa5.09□□□□□ -1.59
LMNB1-207ENST00000494185 ACTN4O43707 911 aaKnown RBP5.08□□□□□ -1.6
LMNB1-207ENST00000494185 KDM4AO75164 1064 aa5.08□□□□□ -1.6
LMNB1-207ENST00000494185 GGCXP38435 758 aa5.08□□□□□ -1.6
LMNB1-207ENST00000494185 CD46P15529 392 aa5.07□□□□□ -1.6
LMNB1-207ENST00000494185 ATP6V1AP38606 617 aa5.07□□□□□ -1.6
LMNB1-207ENST00000494185 TMUB1Q9BVT8 246 aa5.07□□□□□ -1.6
LMNB1-207ENST00000494185 REPIN1Q9BWE0 567 aaKnown RBP5.07□□□□□ -1.6
LMNB1-207ENST00000494185 WBP1LQ9NX94 342 aa5.07□□□□□ -1.6
LMNB1-207ENST00000494185 GCGRP47871 477 aa5.06□□□□□ -1.6
LMNB1-207ENST00000494185 BEGAINQ9BUH8 593 aa5.06□□□□□ -1.6
LMNB1-207ENST00000494185 IL21Q9HBE4 155 aa5.06□□□□□ -1.6
LMNB1-207ENST00000494185 SPDYE5A6NIY4 337 aa5.05□□□□□ -1.6
LMNB1-207ENST00000494185 MS4A1P11836 297 aa5.05□□□□□ -1.6
LMNB1-207ENST00000494185 GJA5P36382 358 aa5.05□□□□□ -1.6
LMNB1-207ENST00000494185 KCNC4Q03721 635 aa5.05□□□□□ -1.6
LMNB1-207ENST00000494185 TMEM132AQ24JP5 1023 aa5.05□□□□□ -1.6
LMNB1-207ENST00000494185 IL27Q8NEV9 243 aa5.04□□□□□ -1.6
LMNB1-207ENST00000494185 FAM117AQ9C073 453 aa5.04□□□□□ -1.6
LMNB1-207ENST00000494185 FMNL1O95466 1100 aaPredicted RBP5.03□□□□□ -1.6
LMNB1-207ENST00000494185 GOPCQ9HD26 462 aa5.03□□□□□ -1.6
LMNB1-207ENST00000494185 APBB1O00213 710 aa5.02□□□□□ -1.61
LMNB1-207ENST00000494185 SLC10A3P09131 477 aa5.02□□□□□ -1.61
LMNB1-207ENST00000494185 APLP1P51693 650 aa5.02□□□□□ -1.61
LMNB1-207ENST00000494185 FUT2Q10981 343 aa5.02□□□□□ -1.61
LMNB1-207ENST00000494185 PCMTD1Q96MG8 357 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-207ENST00000494185 SALL2Q9Y467 1007 aaPredicted RBP5.02□□□□□ -1.61
LMNB1-207ENST00000494185 HOXA2O43364 376 aa5.01□□□□□ -1.61
LMNB1-207ENST00000494185 ITGBL1O95965 494 aaPredicted RBP5.01□□□□□ -1.61
LMNB1-207ENST00000494185 FDX1P10109 184 aa5.01□□□□□ -1.61
LMNB1-207ENST00000494185 IFFO2Q5TF58 517 aa5.01□□□□□ -1.61
LMNB1-207ENST00000494185 MTRQ99707 1265 aa5.01□□□□□ -1.61
LMNB1-207ENST00000494185 ZBTB3Q9H5J0 574 aa5.01□□□□□ -1.61
LMNB1-207ENST00000494185 PLEKHG3A1L390 1219 aa5□□□□□ -1.61
LMNB1-207ENST00000494185 ZPR1O75312 459 aa5□□□□□ -1.61
LMNB1-207ENST00000494185 CLK2P49760 499 aaKnown RBP5□□□□□ -1.61
LMNB1-207ENST00000494185 COPS2P61201 443 aa5□□□□□ -1.61
LMNB1-207ENST00000494185 TUSC1Q2TAM9 212 aa5□□□□□ -1.61
LMNB1-207ENST00000494185 SH3D19Q5HYK7 790 aa5□□□□□ -1.61
LMNB1-207ENST00000494185 PRPF38BQ5VTL8 546 aaKnown RBP5□□□□□ -1.61
LMNB1-207ENST00000494185 PNMA1Q8ND90 353 aa5□□□□□ -1.61
LMNB1-207ENST00000494185 HELBQ8NG08 1087 aaPredicted RBP5□□□□□ -1.61
LMNB1-207ENST00000494185 TBC1D2Q9BYX2 928 aa5□□□□□ -1.61
LMNB1-207ENST00000494185 PLA2G2EQ9NZK7 142 aa5□□□□□ -1.61
LMNB1-207ENST00000494185 NUTM2BA6NNL0 878 aaPredicted RBP4.99□□□□□ -1.61
LMNB1-207ENST00000494185 NUTM2EB1AL46 878 aaPredicted RBP4.99□□□□□ -1.61
LMNB1-207ENST00000494185 C6orf229H3BNL8 230 aa4.99□□□□□ -1.61
LMNB1-207ENST00000494185 ADH1BP00325 375 aa4.99□□□□□ -1.61
LMNB1-207ENST00000494185 MTMR2Q13614 643 aa4.99□□□□□ -1.61
LMNB1-207ENST00000494185 MORN1Q5T089 497 aa4.99□□□□□ -1.61
LMNB1-207ENST00000494185 NUTM2DQ5VT03 806 aaPredicted RBP4.99□□□□□ -1.61
LMNB1-207ENST00000494185 BLOC1S3Q6QNY0 202 aa4.99□□□□□ -1.61
LMNB1-207ENST00000494185 NUTM2AQ8IVF1 878 aaPredicted RBP4.99□□□□□ -1.61
LMNB1-207ENST00000494185 SPIRE2Q8WWL2 714 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms