RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SETBP1Q9Y6X0 1596 aa14.84□□□□□ -0.03
CLCN6-208ENST00000494028 CLTCQ00610 1675 aaKnown RBP14.84□□□□□ -0.03
CLCN6-208ENST00000494028 NEXMIFQ5QGS0 1516 aa14.83□□□□□ -0.04
CLCN6-208ENST00000494028 SCAF11Q99590 1463 aaKnown RBP14.82□□□□□ -0.04
CLCN6-208ENST00000494028 NBPF1Q3BBV0 1214 aa14.81□□□□□ -0.04
CLCN6-208ENST00000494028 ST20-MTHFSA0A0A6YYL1 179 aa14.8□□□□□ -0.04
CLCN6-208ENST00000494028 KDM5AP29375 1690 aaKnown RBP14.8□□□□□ -0.04
CLCN6-208ENST00000494028 TMEM131LA2VDJ0 1609 aa14.79□□□□□ -0.04
CLCN6-208ENST00000494028 DISP3Q9P2K9 1392 aa14.79□□□□□ -0.04
CLCN6-208ENST00000494028 QRICH2Q9H0J4 1663 aa14.77□□□□□ -0.04
CLCN6-208ENST00000494028 ADGRB1O14514 1584 aa14.77□□□□□ -0.04
CLCN6-208ENST00000494028 ERVK-7P63135 1459 aa14.77□□□□□ -0.04
CLCN6-208ENST00000494028 PIK3C2GO75747 1445 aa14.77□□□□□ -0.04
CLCN6-208ENST00000494028 GGT6Q6P531 493 aa14.77□□□□□ -0.05
CLCN6-208ENST00000494028 STAC3Q96MF2 364 aa14.77□□□□□ -0.05
CLCN6-208ENST00000494028 ARHGEF28Q8N1W1 1705 aaKnown RBP14.77□□□□□ -0.05
CLCN6-208ENST00000494028 PRKRIP1Q9H875 184 aaPredicted RBP14.76□□□□□ -0.05
CLCN6-208ENST00000494028 GTF3C3Q9Y5Q9 886 aa14.76□□□□□ -0.05
CLCN6-208ENST00000494028 SPATA31D1Q6ZQQ2 1576 aa14.76□□□□□ -0.05
CLCN6-208ENST00000494028 TESK2Q96S53 571 aa14.75□□□□□ -0.05
CLCN6-208ENST00000494028 ASXL1Q8IXJ9 1541 aa14.74□□□□□ -0.05
CLCN6-208ENST00000494028 WASHC2CQ9Y4E1 1318 aa14.73□□□□□ -0.05
CLCN6-208ENST00000494028 EIF3AQ14152 1382 aaKnown RBP14.72□□□□□ -0.05
CLCN6-208ENST00000494028 ADGRF5Q8IZF2 1346 aa14.71□□□□□ -0.05
CLCN6-208ENST00000494028 POLR3GLQ9BT43 218 aa14.71□□□□□ -0.05
CLCN6-208ENST00000494028 SETD1AO15047 1707 aaKnown RBP14.69□□□□□ -0.06
CLCN6-208ENST00000494028 CCDC184Q52MB2 194 aa14.68□□□□□ -0.06
CLCN6-208ENST00000494028 SBNO2Q9Y2G9 1366 aa14.67□□□□□ -0.06
CLCN6-208ENST00000494028 ZFYVE9O95405 1425 aa14.66□□□□□ -0.06
CLCN6-208ENST00000494028 KTN1Q86UP2 1357 aaKnown RBP14.66□□□□□ -0.06
CLCN6-208ENST00000494028 RPGRIP1LQ68CZ1 1315 aa14.66□□□□□ -0.06
CLCN6-208ENST00000494028 PARD3Q8TEW0 1356 aa14.65□□□□□ -0.06
CLCN6-208ENST00000494028 TMF1P82094 1093 aa14.64□□□□□ -0.07
CLCN6-208ENST00000494028 CFAP70Q5T0N1 1121 aa14.64□□□□□ -0.07
CLCN6-208ENST00000494028 MRS2Q9HD23 443 aa14.63□□□□□ -0.07
CLCN6-208ENST00000494028 CHGAP10645 457 aaKnown RBP14.62□□□□□ -0.07
CLCN6-208ENST00000494028 USP32Q8NFA0 1604 aa14.62□□□□□ -0.07
CLCN6-208ENST00000494028 NRXN3Q9Y4C0 1643 aa14.62□□□□□ -0.07
CLCN6-208ENST00000494028 TULP4Q9NRJ4 1543 aa14.61□□□□□ -0.07
CLCN6-208ENST00000494028 FER1L4A9Z1Z3 1794 aa14.6□□□□□ -0.07
CLCN6-208ENST00000494028 A2ML1A8K2U0 1454 aa14.6□□□□□ -0.07
CLCN6-208ENST00000494028 UBR1Q8IWV7 1749 aa14.6□□□□□ -0.07
CLCN6-208ENST00000494028 KNDC1Q76NI1 1749 aa14.59□□□□□ -0.07
CLCN6-208ENST00000494028 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
CLCN6-208ENST00000494028 MYBBP1AQ9BQG0 1328 aaKnown RBP14.59□□□□□ -0.07
CLCN6-208ENST00000494028 BRD4O60885 1362 aaPredicted RBP14.59□□□□□ -0.07
CLCN6-208ENST00000494028 HNRNPUQ00839 825 aaKnown RBP eCLIP14.58□□□□□ -0.08
CLCN6-208ENST00000494028 SLC52A1Q9NWF4 448 aa14.58□□□□□ -0.08
CLCN6-208ENST00000494028 ALKQ9UM73 1620 aa14.58□□□□□ -0.08
CLCN6-208ENST00000494028 IDI1Q13907 227 aa14.57□□□□□ -0.08
CLCN6-208ENST00000494028 C14orf93Q9H972 538 aaKnown RBP14.57□□□□□ -0.08
CLCN6-208ENST00000494028 C3P01024 1663 aa14.57□□□□□ -0.08
CLCN6-208ENST00000494028 LRPPRCP42704 1394 aaKnown RBP14.57□□□□□ -0.08
CLCN6-208ENST00000494028 PTPRMP28827 1452 aa14.57□□□□□ -0.08
CLCN6-208ENST00000494028 PER1O15534 1290 aaPredicted RBP14.56□□□□□ -0.08
CLCN6-208ENST00000494028 RALBP1Q15311 655 aa14.56□□□□□ -0.08
CLCN6-208ENST00000494028 CENPJQ9HC77 1338 aaPredicted RBP14.55□□□□□ -0.08
CLCN6-208ENST00000494028 CDCA8Q53HL2 280 aa14.54□□□□□ -0.08
CLCN6-208ENST00000494028 FBXO31Q5XUX0 539 aaPredicted RBP14.54□□□□□ -0.08
CLCN6-208ENST00000494028 DLC1Q96QB1 1528 aa14.53□□□□□ -0.08
CLCN6-208ENST00000494028 ZBED9Q6R2W3 1325 aa14.53□□□□□ -0.08
CLCN6-208ENST00000494028 RIMS2Q9UQ26 1411 aa14.52□□□□□ -0.08
CLCN6-208ENST00000494028 NPC1L1Q9UHC9 1359 aa14.52□□□□□ -0.08
CLCN6-208ENST00000494028 CNGB1Q14028 1251 aaPredicted RBP14.52□□□□□ -0.09
CLCN6-208ENST00000494028 FAM9BQ8IZU0 186 aa14.52□□□□□ -0.09
CLCN6-208ENST00000494028 PANK3Q9H999 370 aa14.52□□□□□ -0.09
CLCN6-208ENST00000494028 ANKRD26Q9UPS8 1709 aa14.52□□□□□ -0.09
CLCN6-208ENST00000494028 BLMP54132 1417 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-208ENST00000494028 VGFO15240 615 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-208ENST00000494028 YTHDC2Q9H6S0 1430 aaKnown RBP14.49□□□□□ -0.09
CLCN6-208ENST00000494028 MLECQ14165 292 aa14.49□□□□□ -0.09
CLCN6-208ENST00000494028 NLRP13Q86W25 1043 aa14.49□□□□□ -0.09
CLCN6-208ENST00000494028 ZMYM3Q14202 1370 aa14.48□□□□□ -0.09
CLCN6-208ENST00000494028 TNRQ92752 1358 aa14.48□□□□□ -0.09
CLCN6-208ENST00000494028 CPS1P31327 1500 aa14.48□□□□□ -0.09
CLCN6-208ENST00000494028 NUTM2DQ5VT03 806 aaPredicted RBP14.48□□□□□ -0.09
CLCN6-208ENST00000494028 SUPT16HQ9Y5B9 1047 aaKnown RBP14.48□□□□□ -0.09
CLCN6-208ENST00000494028 INSRP06213 1382 aa14.47□□□□□ -0.09
CLCN6-208ENST00000494028 ADAMTSL3P82987 1691 aa14.47□□□□□ -0.09
CLCN6-208ENST00000494028 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
CLCN6-208ENST00000494028 TMEM132EQ6IEE7 984 aa14.47□□□□□ -0.09
CLCN6-208ENST00000494028 PNISRQ8TF01 805 aaKnown RBP14.47□□□□□ -0.09
CLCN6-208ENST00000494028 TRAK1Q9UPV9 953 aa14.47□□□□□ -0.09
CLCN6-208ENST00000494028 SHPRHQ149N8 1683 aa14.46□□□□□ -0.09
CLCN6-208ENST00000494028 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.09
CLCN6-208ENST00000494028 KIF20BQ96Q89 1820 aa14.45□□□□□ -0.1
CLCN6-208ENST00000494028 NLRP1Q9C000 1473 aa14.45□□□□□ -0.1
CLCN6-208ENST00000494028 CC2D1BQ5T0F9 858 aaKnown RBP14.45□□□□□ -0.1
CLCN6-208ENST00000494028 TMC1Q8TDI8 760 aa14.45□□□□□ -0.1
CLCN6-208ENST00000494028 NSD3Q9BZ95 1437 aa14.44□□□□□ -0.1
CLCN6-208ENST00000494028 RIMS1Q86UR5 1692 aaKnown RBP14.43□□□□□ -0.1
CLCN6-208ENST00000494028 SMG6Q86US8 1419 aaKnown RBP14.42□□□□□ -0.1
CLCN6-208ENST00000494028 KNSTRNQ9Y448 316 aa14.42□□□□□ -0.1
CLCN6-208ENST00000494028 ZNF142P52746 1687 aaPredicted RBP14.42□□□□□ -0.1
CLCN6-208ENST00000494028 ADGRB2O60241 1585 aa14.41□□□□□ -0.1
CLCN6-208ENST00000494028 TECPR2O15040 1411 aa14.41□□□□□ -0.1
CLCN6-208ENST00000494028 NINLQ9Y2I6 1382 aa14.4□□□□□ -0.1
CLCN6-208ENST00000494028 SLIT1O75093 1534 aa14.4□□□□□ -0.1
CLCN6-208ENST00000494028 ARHGAP23Q9P227 1491 aa14.39□□□□□ -0.11
CLCN6-208ENST00000494028 ANKRD36BQ8N2N9 1353 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms