RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FAM135AQ9P2D6 1515 aa8.91□□□□□ -0.98
VPS13B-205ENST00000493587 FRMPD1Q5SYB0 1578 aa8.91□□□□□ -0.98
VPS13B-205ENST00000493587 MYO3AQ8NEV4 1616 aa8.91□□□□□ -0.98
VPS13B-205ENST00000493587 MADDQ8WXG6 1647 aa8.91□□□□□ -0.98
VPS13B-205ENST00000493587 MROH2AA6NES4 1674 aa8.91□□□□□ -0.98
VPS13B-205ENST00000493587 SIGLEC1Q9BZZ2 1709 aa8.9□□□□□ -0.98
VPS13B-205ENST00000493587 PIK3C2BO00750 1634 aa8.9□□□□□ -0.98
VPS13B-205ENST00000493587 E9PSI1 815 aa8.9□□□□□ -0.99
VPS13B-205ENST00000493587 SECISBP2LQ93073 1101 aaKnown RBP8.9□□□□□ -0.99
VPS13B-205ENST00000493587 CENPJQ9HC77 1338 aaPredicted RBP8.9□□□□□ -0.99
VPS13B-205ENST00000493587 CCDC141Q6ZP82 1450 aa8.9□□□□□ -0.99
VPS13B-205ENST00000493587 FBLN2P98095 1184 aa8.89□□□□□ -0.99
VPS13B-205ENST00000493587 POGKQ9P215 609 aa8.89□□□□□ -0.99
VPS13B-205ENST00000493587 ZNF830Q96NB3 372 aaPredicted RBP8.89□□□□□ -0.99
VPS13B-205ENST00000493587 ATP1B4Q9UN42 357 aaPredicted RBP8.89□□□□□ -0.99
VPS13B-205ENST00000493587 GOLGA6L3A6NEY3 463 aa8.88□□□□□ -0.99
VPS13B-205ENST00000493587 TCERG1O14776 1098 aaKnown RBP8.88□□□□□ -0.99
VPS13B-205ENST00000493587 KIAA1211Q6ZU35 1233 aa8.88□□□□□ -0.99
VPS13B-205ENST00000493587 GZF1Q9H116 711 aaPredicted RBP8.88□□□□□ -0.99
VPS13B-205ENST00000493587 DUOX2Q9NRD8 1548 aa8.87□□□□□ -0.99
VPS13B-205ENST00000493587 CFAP74Q9C0B2 1584 aa8.87□□□□□ -0.99
VPS13B-205ENST00000493587 SMAP1Q8IYB5 467 aaPredicted RBP8.87□□□□□ -0.99
VPS13B-205ENST00000493587 LMTK2Q8IWU2 1503 aa8.87□□□□□ -0.99
VPS13B-205ENST00000493587 C9orf84Q5VXU9 1444 aa8.87□□□□□ -0.99
VPS13B-205ENST00000493587 MAP7D2Q96T17 732 aa8.87□□□□□ -0.99
VPS13B-205ENST00000493587 RALGAPBQ86X10 1494 aa8.87□□□□□ -0.99
VPS13B-205ENST00000493587 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
VPS13B-205ENST00000493587 PPLO60437 1756 aa8.86□□□□□ -0.99
VPS13B-205ENST00000493587 ZNF644Q9H582 1327 aaPredicted RBP8.86□□□□□ -0.99
VPS13B-205ENST00000493587 CLTCL1P53675 1640 aa8.86□□□□□ -0.99
VPS13B-205ENST00000493587 PLCH2O75038 1416 aa8.86□□□□□ -0.99
VPS13B-205ENST00000493587 ESPNB1AK53 854 aa8.86□□□□□ -0.99
VPS13B-205ENST00000493587 PLPPR3Q6T4P5 718 aa8.86□□□□□ -0.99
VPS13B-205ENST00000493587 TRPM2O94759 1503 aa8.86□□□□□ -0.99
VPS13B-205ENST00000493587 ZNF518AQ6AHZ1 1483 aa8.86□□□□□ -0.99
VPS13B-205ENST00000493587 ERBINQ96RT1 1412 aa8.85□□□□□ -0.99
VPS13B-205ENST00000493587 HOMEZQ8IX15 550 aa8.85□□□□□ -0.99
VPS13B-205ENST00000493587 ARID3CA6NKF2 412 aa8.85□□□□□ -0.99
VPS13B-205ENST00000493587 SAMD1Q6SPF0 538 aaPredicted RBP8.85□□□□□ -0.99
VPS13B-205ENST00000493587 AEBP1Q8IUX7 1158 aa8.85□□□□□ -0.99
VPS13B-205ENST00000493587 MYH16Q9H6N6 1097 aa8.85□□□□□ -0.99
VPS13B-205ENST00000493587 GLI2P10070 1586 aa8.85□□□□□ -0.99
VPS13B-205ENST00000493587 FAM50AQ14320 339 aaKnown RBP8.84□□□□□ -0.99
VPS13B-205ENST00000493587 ABCA6Q8N139 1617 aa8.84□□□□□ -0.99
VPS13B-205ENST00000493587 IRX3P78415 501 aaPredicted RBP8.84□□□□□ -1
VPS13B-205ENST00000493587 C14orf37Q86TY3 774 aa8.84□□□□□ -1
VPS13B-205ENST00000493587 TEX2Q8IWB9 1127 aa8.84□□□□□ -1
VPS13B-205ENST00000493587 BACH2Q9BYV9 841 aa8.84□□□□□ -1
VPS13B-205ENST00000493587 RTEL1-TNFRSF6BF6WH68 1400 aa8.83□□□□□ -1
VPS13B-205ENST00000493587 APPP05067 770 aa8.83□□□□□ -1
VPS13B-205ENST00000493587 PANK2Q9BZ23 570 aa8.83□□□□□ -1
VPS13B-205ENST00000493587 SETD1AO15047 1707 aaKnown RBP8.82□□□□□ -1
VPS13B-205ENST00000493587 SENP3-EIF4A1A0A087X0R7 540 aa8.82□□□□□ -1
VPS13B-205ENST00000493587 POLR3GLQ9BT43 218 aa8.82□□□□□ -1
VPS13B-205ENST00000493587 PLEKHH2Q8IVE3 1493 aa8.82□□□□□ -1
VPS13B-205ENST00000493587 NRXN1Q9ULB1 1477 aa8.82□□□□□ -1
VPS13B-205ENST00000493587 HECW2Q9P2P5 1572 aa8.82□□□□□ -1
VPS13B-205ENST00000493587 KIF13AQ9H1H9 1805 aa8.82□□□□□ -1
VPS13B-205ENST00000493587 PTPRTO14522 1441 aa8.82□□□□□ -1
VPS13B-205ENST00000493587 TMEM51Q9NW97 253 aa8.82□□□□□ -1
VPS13B-205ENST00000493587 CNPY4Q8N129 248 aa8.81□□□□□ -1
VPS13B-205ENST00000493587 WWC1Q8IX03 1113 aa8.81□□□□□ -1
VPS13B-205ENST00000493587 XRCC6P12956 609 aaKnown RBP eCLIP8.81□□□□□ -1
VPS13B-205ENST00000493587 SLKQ9H2G2 1235 aaPredicted RBP8.8□□□□□ -1
VPS13B-205ENST00000493587 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
VPS13B-205ENST00000493587 ATP7AQ04656 1500 aa8.8□□□□□ -1
VPS13B-205ENST00000493587 MRS2Q9HD23 443 aa8.8□□□□□ -1
VPS13B-205ENST00000493587 REREQ9P2R6 1566 aa8.8□□□□□ -1
VPS13B-205ENST00000493587 EFCAB6Q5THR3 1501 aa8.79□□□□□ -1
VPS13B-205ENST00000493587 KIF1BO60333 1816 aa8.79□□□□□ -1
VPS13B-205ENST00000493587 GPRASP1Q5JY77 1395 aa8.79□□□□□ -1
VPS13B-205ENST00000493587 PATL2C9JE40 543 aaKnown RBP8.79□□□□□ -1
VPS13B-205ENST00000493587 CERS3Q8IU89 383 aa8.79□□□□□ -1
VPS13B-205ENST00000493587 CGNQ9P2M7 1197 aaKnown RBP8.79□□□□□ -1
VPS13B-205ENST00000493587 R3HCC1Q9Y3T6 440 aaKnown RBP8.79□□□□□ -1
VPS13B-205ENST00000493587 ZMYM4Q5VZL5 1548 aa8.78□□□□□ -1
VPS13B-205ENST00000493587 MSNP26038 577 aaKnown RBP8.78□□□□□ -1
VPS13B-205ENST00000493587 A2MP01023 1474 aa8.78□□□□□ -1
VPS13B-205ENST00000493587 CAMSAP1Q5T5Y3 1602 aa8.78□□□□□ -1
VPS13B-205ENST00000493587 MYO5BQ9ULV0 1848 aa8.78□□□□□ -1
VPS13B-205ENST00000493587 ARHGAP5Q13017 1502 aa8.78□□□□□ -1
VPS13B-205ENST00000493587 DMTNQ08495 405 aa8.77□□□□□ -1.01
VPS13B-205ENST00000493587 MPHOSPH9Q99550 1183 aa8.77□□□□□ -1.01
VPS13B-205ENST00000493587 DHX29Q7Z478 1369 aaKnown RBP8.77□□□□□ -1.01
VPS13B-205ENST00000493587 MTERF4Q7Z6M4 381 aaKnown RBP8.77□□□□□ -1.01
VPS13B-205ENST00000493587 ZBTB22O15209 634 aa8.76□□□□□ -1.01
VPS13B-205ENST00000493587 MS4A1P11836 297 aa8.76□□□□□ -1.01
VPS13B-205ENST00000493587 TRAPPC8Q9Y2L5 1435 aa8.76□□□□□ -1.01
VPS13B-205ENST00000493587 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.76□□□□□ -1.01
VPS13B-205ENST00000493587 ADGRB3O60242 1522 aa8.76□□□□□ -1.01
VPS13B-205ENST00000493587 DIP2CQ9Y2E4 1556 aa8.76□□□□□ -1.01
VPS13B-205ENST00000493587 UTP14CQ5TAP6 766 aaKnown RBP8.75□□□□□ -1.01
VPS13B-205ENST00000493587 BCCIPQ9P287 314 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS13B-205ENST00000493587 PRAG1Q86YV5 1406 aa8.75□□□□□ -1.01
VPS13B-205ENST00000493587 SETBP1Q9Y6X0 1596 aa8.74□□□□□ -1.01
VPS13B-205ENST00000493587 ANKRD30AQ9BXX3 1397 aa8.74□□□□□ -1.01
VPS13B-205ENST00000493587 UQCRHLA0A096LP55 91 aa8.74□□□□□ -1.01
VPS13B-205ENST00000493587 UQCRHP07919 91 aa8.74□□□□□ -1.01
VPS13B-205ENST00000493587 NBPF8Q3BBV2 869 aa8.74□□□□□ -1.01
VPS13B-205ENST00000493587 SYNMO15061 1565 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms