RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 ARHGEF12Q9NZN5 1544 aa20.17■□□□□ 0.82
CACUL1-206ENST00000493518 KDM2BQ8NHM5 1336 aa20.15■□□□□ 0.82
CACUL1-206ENST00000493518 MAGI2Q86UL8 1455 aa20.15■□□□□ 0.82
CACUL1-206ENST00000493518 USP35Q9P2H5 1018 aa20.15■□□□□ 0.82
CACUL1-206ENST00000493518 COL17A1Q9UMD9 1497 aaPredicted RBP20.15■□□□□ 0.82
CACUL1-206ENST00000493518 CDC42BPAQ5VT25 1732 aa20.14■□□□□ 0.81
CACUL1-206ENST00000493518 KDM5DQ9BY66 1539 aa20.13■□□□□ 0.81
CACUL1-206ENST00000493518 TMEM132EQ6IEE7 984 aa20.13■□□□□ 0.81
CACUL1-206ENST00000493518 RSPH4AQ5TD94 716 aa20.12■□□□□ 0.81
CACUL1-206ENST00000493518 SPAG9O60271 1321 aaKnown RBP20.12■□□□□ 0.81
CACUL1-206ENST00000493518 WASHC2CQ9Y4E1 1318 aa20.11■□□□□ 0.81
CACUL1-206ENST00000493518 CDCA8Q53HL2 280 aa20.11■□□□□ 0.81
CACUL1-206ENST00000493518 EFCAB2Q5VUJ9 269 aa20.11■□□□□ 0.81
CACUL1-206ENST00000493518 MORC1Q86VD1 984 aa20.1■□□□□ 0.81
CACUL1-206ENST00000493518 GZF1Q9H116 711 aaPredicted RBP20.1■□□□□ 0.81
CACUL1-206ENST00000493518 SLC12A5Q9H2X9 1139 aa20.1■□□□□ 0.81
CACUL1-206ENST00000493518 CENPJQ9HC77 1338 aaPredicted RBP20.1■□□□□ 0.81
CACUL1-206ENST00000493518 CARD14Q9BXL6 1004 aa20.1■□□□□ 0.81
CACUL1-206ENST00000493518 BLMP54132 1417 aaPredicted RBP20.09■□□□□ 0.81
CACUL1-206ENST00000493518 ADGRF5Q8IZF2 1346 aa20.07■□□□□ 0.8
CACUL1-206ENST00000493518 POGKQ9P215 609 aa20.07■□□□□ 0.8
CACUL1-206ENST00000493518 CROCC2H7BZ55 1655 aa20.07■□□□□ 0.8
CACUL1-206ENST00000493518 SHANK2Q9UPX8 1470 aa20.05■□□□□ 0.8
CACUL1-206ENST00000493518 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
CACUL1-206ENST00000493518 E9PSI1 815 aa20.05■□□□□ 0.8
CACUL1-206ENST00000493518 GGT6Q6P531 493 aa20.04■□□□□ 0.8
CACUL1-206ENST00000493518 GPRASP1Q5JY77 1395 aa20.04■□□□□ 0.8
CACUL1-206ENST00000493518 U2SURPO15042 1029 aaKnown RBP20.04■□□□□ 0.8
CACUL1-206ENST00000493518 RLBP1P12271 317 aa20.04■□□□□ 0.8
CACUL1-206ENST00000493518 WWC1Q8IX03 1113 aa20.04■□□□□ 0.8
CACUL1-206ENST00000493518 TCP11L2Q8N4U5 519 aa20.03■□□□□ 0.8
CACUL1-206ENST00000493518 ZMYM4Q5VZL5 1548 aa20.03■□□□□ 0.8
CACUL1-206ENST00000493518 U2AF1L5P0DN76 240 aaPredicted RBP20.02■□□□□ 0.8
CACUL1-206ENST00000493518 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.84e-6■□□□□ 8.9
CACUL1-206ENST00000493518 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.8
CACUL1-206ENST00000493518 NUP160Q12769 1436 aa20.01■□□□□ 0.79
CACUL1-206ENST00000493518 ABCA8O94911 1581 aa20.01■□□□□ 0.79
CACUL1-206ENST00000493518 ZNF521Q96K83 1311 aa20.01■□□□□ 0.79
CACUL1-206ENST00000493518 TSR2Q969E8 191 aaKnown RBP20.01■□□□□ 0.79
CACUL1-206ENST00000493518 STK26Q9P289 416 aa20.01■□□□□ 0.79
CACUL1-206ENST00000493518 WDR7Q9Y4E6 1490 aa20.01■□□□□ 0.79
CACUL1-206ENST00000493518 PCDHB15Q9Y5E8 787 aa20■□□□□ 0.79
CACUL1-206ENST00000493518 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
CACUL1-206ENST00000493518 MTHFSP49914 203 aa20■□□□□ 0.79
CACUL1-206ENST00000493518 MFAP1P55081 439 aaKnown RBP19.98■□□□□ 0.79
CACUL1-206ENST00000493518 FTSJ3Q8IY81 847 aaKnown RBP19.98■□□□□ 0.79
CACUL1-206ENST00000493518 UPF2Q9HAU5 1272 aaKnown RBP19.97■□□□□ 0.79
CACUL1-206ENST00000493518 PDZRN3Q9UPQ7 1066 aa19.97■□□□□ 0.79
CACUL1-206ENST00000493518 PRKCSHP14314 528 aaPredicted RBP19.96■□□□□ 0.79
CACUL1-206ENST00000493518 ADCY10Q96PN6 1610 aa19.96■□□□□ 0.79
CACUL1-206ENST00000493518 NKTRP30414 1462 aaKnown RBP19.95■□□□□ 0.78
CACUL1-206ENST00000493518 E9PCH4 1651 aa19.95■□□□□ 0.78
CACUL1-206ENST00000493518 BECN1Q14457 450 aa19.95■□□□□ 0.78
CACUL1-206ENST00000493518 CGNL1Q0VF96 1302 aa19.93■□□□□ 0.78
CACUL1-206ENST00000493518 TTC37Q6PGP7 1564 aa19.93■□□□□ 0.78
CACUL1-206ENST00000493518 PRDM15P57071 1507 aaPredicted RBP19.92■□□□□ 0.78
CACUL1-206ENST00000493518 RARSP54136 660 aaKnown RBP19.92■□□□□ 0.78
CACUL1-206ENST00000493518 FOXD4L1Q9NU39 408 aa19.92■□□□□ 0.78
CACUL1-206ENST00000493518 CABP2Q9NPB3 220 aa19.92■□□□□ 0.78
CACUL1-206ENST00000493518 ITPRIPQ8IWB1 547 aa19.91■□□□□ 0.78
CACUL1-206ENST00000493518 CDC42BPBQ9Y5S2 1711 aa19.91■□□□□ 0.78
CACUL1-206ENST00000493518 SCAPERQ9BY12 1400 aa19.91■□□□□ 0.78
CACUL1-206ENST00000493518 USP19O94966 1318 aa19.9■□□□□ 0.78
CACUL1-206ENST00000493518 SMC4Q9NTJ3 1288 aa19.9■□□□□ 0.78
CACUL1-206ENST00000493518 FBLN1P23142 703 aa19.89■□□□□ 0.78
CACUL1-206ENST00000493518 GGNBP2Q9H3C7 697 aa19.89■□□□□ 0.78
CACUL1-206ENST00000493518 SCAF11Q99590 1463 aaKnown RBP19.89■□□□□ 0.78
CACUL1-206ENST00000493518 ASXL1Q8IXJ9 1541 aa19.89■□□□□ 0.77
CACUL1-206ENST00000493518 EIF3AQ14152 1382 aaKnown RBP19.89■□□□□ 0.77
CACUL1-206ENST00000493518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.89■□□□□ 0.778e-6■□□□□ 10.5
CACUL1-206ENST00000493518 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
CACUL1-206ENST00000493518 NSD3Q9BZ95 1437 aa19.88■□□□□ 0.77
CACUL1-206ENST00000493518 TRMT2AQ8IZ69 625 aaKnown RBP19.88■□□□□ 0.77
CACUL1-206ENST00000493518 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
CACUL1-206ENST00000493518 ELL2O00472 640 aaPredicted RBP19.87■□□□□ 0.77
CACUL1-206ENST00000493518 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
CACUL1-206ENST00000493518 PDE3AQ14432 1141 aa19.87■□□□□ 0.77
CACUL1-206ENST00000493518 KANK1Q14678 1352 aa19.86■□□□□ 0.77
CACUL1-206ENST00000493518 ARHGEF5Q12774 1597 aa19.86■□□□□ 0.77
CACUL1-206ENST00000493518 SRPK2P78362 688 aaKnown RBP19.85■□□□□ 0.77
CACUL1-206ENST00000493518 CFAP53Q96M91 514 aa19.85■□□□□ 0.77
CACUL1-206ENST00000493518 TBC1D2Q9BYX2 928 aa19.85■□□□□ 0.77
CACUL1-206ENST00000493518 EXOSC9Q06265 439 aaKnown RBP19.85■□□□□ 0.77
CACUL1-206ENST00000493518 MAPK8IP3Q9UPT6 1336 aa19.84■□□□□ 0.77
CACUL1-206ENST00000493518 CFAP65Q6ZU64 1925 aaKnown RBP19.84■□□□□ 0.77
CACUL1-206ENST00000493518 PMFBP1Q8TBY8 1022 aa19.83■□□□□ 0.77
CACUL1-206ENST00000493518 RWDD1Q9H446 243 aaPredicted RBP19.83■□□□□ 0.77
CACUL1-206ENST00000493518 LNPKQ9C0E8 428 aa19.81■□□□□ 0.76
CACUL1-206ENST00000493518 MYO5CQ9NQX4 1742 aa19.8■□□□□ 0.76
CACUL1-206ENST00000493518 C1orf115Q9H7X2 142 aa19.8■□□□□ 0.76
CACUL1-206ENST00000493518 PIK3C2GO75747 1445 aa19.8■□□□□ 0.76
CACUL1-206ENST00000493518 DUOX2Q9NRD8 1548 aa19.8■□□□□ 0.76
CACUL1-206ENST00000493518 DZIP1LQ8IYY4 767 aaKnown RBP19.8■□□□□ 0.76
CACUL1-206ENST00000493518 PREX2Q70Z35 1606 aa19.79■□□□□ 0.76
CACUL1-206ENST00000493518 PANK2Q9BZ23 570 aa19.79■□□□□ 0.76
CACUL1-206ENST00000493518 ATP10AO60312 1499 aa19.79■□□□□ 0.76
CACUL1-206ENST00000493518 ZKSCAN2Q63HK3 967 aa19.79■□□□□ 0.76
CACUL1-206ENST00000493518 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
CACUL1-206ENST00000493518 HSP90AA1P07900 732 aaKnown RBP19.78■□□□□ 0.76
CACUL1-206ENST00000493518 THUMPD2Q9BTF0 503 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms