RNA–Protein interactions for RNA: ENST00000493116.5

SOX2-OT-214, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-214ENST00000493116 PPP2R2DQ66LE6 453 aa9.1□□□□□ -0.95
SOX2-OT-214ENST00000493116 PXYLP1Q8TE99 480 aa9.1□□□□□ -0.95
SOX2-OT-214ENST00000493116 JPH4Q96JJ6 628 aa9.1□□□□□ -0.95
SOX2-OT-214ENST00000493116 ATP1B4Q9UN42 357 aaPredicted RBP9.1□□□□□ -0.95
SOX2-OT-214ENST00000493116 PDE4CQ08493 712 aa9.09□□□□□ -0.95
SOX2-OT-214ENST00000493116 WWC1Q8IX03 1113 aa9.09□□□□□ -0.95
SOX2-OT-214ENST00000493116 TTC13Q8NBP0 860 aa9.09□□□□□ -0.95
SOX2-OT-214ENST00000493116 POLR3EQ9NVU0 708 aa9.09□□□□□ -0.95
SOX2-OT-214ENST00000493116 KDM4FA0A1W2PPD8 638 aa9.08□□□□□ -0.96
SOX2-OT-214ENST00000493116 COG6Q9Y2V7 657 aa9.08□□□□□ -0.96
SOX2-OT-214ENST00000493116 ADGRG1Q9Y653 693 aa9.08□□□□□ -0.96
SOX2-OT-214ENST00000493116 VARS2Q5ST30 1063 aaKnown RBP9.07□□□□□ -0.96
SOX2-OT-214ENST00000493116 RBM33Q96EV2 1170 aaKnown RBP9.07□□□□□ -0.96
SOX2-OT-214ENST00000493116 PRM3Q9NNZ6 103 aa9.07□□□□□ -0.96
SOX2-OT-214ENST00000493116 PPP1R15AO75807 674 aaPredicted RBP9.06□□□□□ -0.96
SOX2-OT-214ENST00000493116 RFC5P40937 340 aa9.06□□□□□ -0.96
SOX2-OT-214ENST00000493116 TBC1D2Q9BYX2 928 aa9.06□□□□□ -0.96
SOX2-OT-214ENST00000493116 PLSCR2Q9NRY7 297 aa9.06□□□□□ -0.96
SOX2-OT-214ENST00000493116 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
SOX2-OT-214ENST00000493116 TSR1Q2NL82 804 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-214ENST00000493116 RBM46Q8TBY0 533 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-214ENST00000493116 POM121Q96HA1 1249 aa9.05□□□□□ -0.96
SOX2-OT-214ENST00000493116 LHX6Q9UPM6 363 aa9.05□□□□□ -0.96
SOX2-OT-214ENST00000493116 GJA5P36382 358 aa9.04□□□□□ -0.96
SOX2-OT-214ENST00000493116 C6orf132Q5T0Z8 1188 aa9.04□□□□□ -0.96
SOX2-OT-214ENST00000493116 ZNF330Q9Y3S2 320 aaPredicted RBP9.04□□□□□ -0.96
SOX2-OT-214ENST00000493116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-214ENST00000493116 FOSBP53539 338 aa9.03□□□□□ -0.96
SOX2-OT-214ENST00000493116 PADI6Q6TGC4 694 aa9.03□□□□□ -0.96
SOX2-OT-214ENST00000493116 NECTIN2Q92692 538 aa9.03□□□□□ -0.96
SOX2-OT-214ENST00000493116 ZNF687Q8N1G0 1237 aa9.02□□□□□ -0.97
SOX2-OT-214ENST00000493116 SPTLC1O15269 473 aa9.01□□□□□ -0.97
SOX2-OT-214ENST00000493116 ZDHHC16Q969W1 377 aa9.01□□□□□ -0.97
SOX2-OT-214ENST00000493116 PRSS12P56730 875 aa9□□□□□ -0.97
SOX2-OT-214ENST00000493116 RIC3Q7Z5B4 369 aa9□□□□□ -0.97
SOX2-OT-214ENST00000493116 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
SOX2-OT-214ENST00000493116 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
SOX2-OT-214ENST00000493116 SNRKQ9NRH2 765 aa9□□□□□ -0.97
SOX2-OT-214ENST00000493116 ACIN1Q9UKV3 1341 aaKnown RBP9□□□□□ -0.97
SOX2-OT-214ENST00000493116 SULF1Q8IWU6 871 aa8.99□□□□□ -0.97
SOX2-OT-214ENST00000493116 PSDA5PKW4 1024 aaPredicted RBP8.98□□□□□ -0.97
SOX2-OT-214ENST00000493116 PATL2C9JE40 543 aaKnown RBP8.98□□□□□ -0.97
SOX2-OT-214ENST00000493116 SPIRE2Q8WWL2 714 aa8.97□□□□□ -0.97
SOX2-OT-214ENST00000493116 CD46P15529 392 aa8.96□□□□□ -0.98
SOX2-OT-214ENST00000493116 FAM161AQ3B820 660 aa8.96□□□□□ -0.98
SOX2-OT-214ENST00000493116 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
SOX2-OT-214ENST00000493116 LIMD1Q9UGP4 676 aa8.95□□□□□ -0.98
SOX2-OT-214ENST00000493116 UNC13AQ9UPW8 1703 aa8.94□□□□□ -0.98
SOX2-OT-214ENST00000493116 RSBN1LQ6PCB5 846 aaPredicted RBP8.94□□□□□ -0.98
SOX2-OT-214ENST00000493116 NUTM1Q86Y26 1132 aa8.94□□□□□ -0.98
SOX2-OT-214ENST00000493116 MTMR14Q8NCE2 650 aa8.94□□□□□ -0.98
SOX2-OT-214ENST00000493116 PPP4R3BQ5MIZ7 849 aa8.93□□□□□ -0.98
SOX2-OT-214ENST00000493116 PRPF38BQ5VTL8 546 aaKnown RBP8.93□□□□□ -0.98
SOX2-OT-214ENST00000493116 ZNF454Q8N9F8 522 aa8.93□□□□□ -0.98
SOX2-OT-214ENST00000493116 EYA1Q99502 592 aa8.93□□□□□ -0.98
SOX2-OT-214ENST00000493116 RCCD1A6NED2 376 aa8.92□□□□□ -0.98
SOX2-OT-214ENST00000493116 LILRB3O75022 631 aa8.92□□□□□ -0.98
SOX2-OT-214ENST00000493116 POTEEQ6S8J3 1075 aa8.92□□□□□ -0.98
SOX2-OT-214ENST00000493116 NLRP7Q8WX94 980 aa8.92□□□□□ -0.98
SOX2-OT-214ENST00000493116 CALR3Q96L12 384 aaKnown RBP8.92□□□□□ -0.98
SOX2-OT-214ENST00000493116 GDPD2Q9HCC8 539 aa8.92□□□□□ -0.98
SOX2-OT-214ENST00000493116 PBX2P40425 430 aa8.91□□□□□ -0.98
SOX2-OT-214ENST00000493116 RETREG2Q8NC44 543 aa8.91□□□□□ -0.98
SOX2-OT-214ENST00000493116 DNAJB2P25686 324 aa8.9□□□□□ -0.98
SOX2-OT-214ENST00000493116 AEBP1Q8IUX7 1158 aa8.9□□□□□ -0.98
SOX2-OT-214ENST00000493116 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
SOX2-OT-214ENST00000493116 FBXO31Q5XUX0 539 aaPredicted RBP8.89□□□□□ -0.99
SOX2-OT-214ENST00000493116 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
SOX2-OT-214ENST00000493116 ADAM33Q9BZ11 813 aa8.89□□□□□ -0.99
SOX2-OT-214ENST00000493116 AXIN2Q9Y2T1 843 aa8.89□□□□□ -0.99
SOX2-OT-214ENST00000493116 USP46P62068 366 aa8.88□□□□□ -0.99
SOX2-OT-214ENST00000493116 ARHGAP33O14559 1287 aa8.87□□□□□ -0.99
SOX2-OT-214ENST00000493116 ABL2P42684 1182 aa8.87□□□□□ -0.99
SOX2-OT-214ENST00000493116 RSPH4AQ5TD94 716 aa8.87□□□□□ -0.99
SOX2-OT-214ENST00000493116 MOXD2PA6NHM9 499 aa8.86□□□□□ -0.99
SOX2-OT-214ENST00000493116 NBPF26B4DH59 902 aa8.86□□□□□ -0.99
SOX2-OT-214ENST00000493116 AP1G2O75843 785 aa8.86□□□□□ -0.99
SOX2-OT-214ENST00000493116 LSM11P83369 360 aaKnown RBP eCLIP8.86□□□□□ -0.99
SOX2-OT-214ENST00000493116 GLMNQ92990 594 aa8.86□□□□□ -0.99
SOX2-OT-214ENST00000493116 USTQ9Y2C2 406 aa8.86□□□□□ -0.99
SOX2-OT-214ENST00000493116 NDUFB9Q9Y6M9 179 aa8.86□□□□□ -0.99
SOX2-OT-214ENST00000493116 TMCO4Q5TGY1 634 aa8.85□□□□□ -0.99
SOX2-OT-214ENST00000493116 PACS2Q86VP3 889 aa8.85□□□□□ -0.99
SOX2-OT-214ENST00000493116 PBXIP1Q96AQ6 731 aa8.85□□□□□ -0.99
SOX2-OT-214ENST00000493116 TMEM134Q9H6X4 195 aa8.85□□□□□ -0.99
SOX2-OT-214ENST00000493116 BCL2L12Q9HB09 334 aa8.85□□□□□ -0.99
SOX2-OT-214ENST00000493116 NUTM2BA6NNL0 878 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-214ENST00000493116 DDX11L8A8MPP1 907 aa8.84□□□□□ -0.99
SOX2-OT-214ENST00000493116 NUTM2EB1AL46 878 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-214ENST00000493116 PSEN2P49810 448 aa8.84□□□□□ -0.99
SOX2-OT-214ENST00000493116 NUTM2DQ5VT03 806 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-214ENST00000493116 ANKRD13DQ6ZTN6 518 aa8.84□□□□□ -0.99
SOX2-OT-214ENST00000493116 NUTM2AQ8IVF1 878 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-214ENST00000493116 ZBTB3Q9H5J0 574 aa8.84□□□□□ -0.99
SOX2-OT-214ENST00000493116 PPP1R3GB7ZBB8 358 aa8.83□□□□□ -1
SOX2-OT-214ENST00000493116 USP17L8P0C7I0 530 aa8.83□□□□□ -1
SOX2-OT-214ENST00000493116 KCNA1Q09470 495 aa8.83□□□□□ -1
SOX2-OT-214ENST00000493116 IRF5Q13568 498 aa8.83□□□□□ -1
SOX2-OT-214ENST00000493116 FAM198AQ9UFP1 575 aa8.83□□□□□ -1
SOX2-OT-214ENST00000493116 TBC1D2BQ9UPU7 963 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms