RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 PCDHB3Q9Y5E6 796 aa14.57□□□□□ -0.08
COL12A1-209ENST00000493109 TLL1O43897 1013 aa14.55□□□□□ -0.08
COL12A1-209ENST00000493109 RCCD1A6NED2 376 aa14.53□□□□□ -0.08
COL12A1-209ENST00000493109 RBM46Q8TBY0 533 aaKnown RBP14.52□□□□□ -0.09
COL12A1-209ENST00000493109 TMUB1Q9BVT8 246 aa14.52□□□□□ -0.09
COL12A1-209ENST00000493109 RNF223E7ERA6 249 aa14.51□□□□□ -0.09
COL12A1-209ENST00000493109 GGCXP38435 758 aa14.51□□□□□ -0.09
COL12A1-209ENST00000493109 PRR14Q9BWN1 585 aa14.51□□□□□ -0.09
COL12A1-209ENST00000493109 NUTM2FA1L443 756 aa14.5□□□□□ -0.09
COL12A1-209ENST00000493109 SLC4A3P48751 1232 aa14.5□□□□□ -0.09
COL12A1-209ENST00000493109 TRIM67Q6ZTA4 783 aa14.5□□□□□ -0.09
COL12A1-209ENST00000493109 PDZRN3Q9UPQ7 1066 aa14.5□□□□□ -0.09
COL12A1-209ENST00000493109 SEMA3EO15041 775 aa14.49□□□□□ -0.09
COL12A1-209ENST00000493109 SLC10A3P09131 477 aa14.49□□□□□ -0.09
COL12A1-209ENST00000493109 ACTN4O43707 911 aaKnown RBP14.48□□□□□ -0.09
COL12A1-209ENST00000493109 CFHP08603 1231 aa14.46□□□□□ -0.09
COL12A1-209ENST00000493109 PPEF1O14829 653 aaPredicted RBP14.44□□□□□ -0.1
COL12A1-209ENST00000493109 FCHSD2O94868 740 aa14.43□□□□□ -0.1
COL12A1-209ENST00000493109 S1PR4O95977 384 aa14.42□□□□□ -0.1
COL12A1-209ENST00000493109 PXYLP1Q8TE99 480 aa14.42□□□□□ -0.1
COL12A1-209ENST00000493109 SLC19A1P41440 591 aa14.41□□□□□ -0.1
COL12A1-209ENST00000493109 KMT5BQ4FZB7 885 aa14.41□□□□□ -0.1
COL12A1-209ENST00000493109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.4□□□□□ -0.1
COL12A1-209ENST00000493109 P3H3Q8IVL6 736 aa14.39□□□□□ -0.11
COL12A1-209ENST00000493109 SPRYD7Q5W111 196 aa14.38□□□□□ -0.11
COL12A1-209ENST00000493109 LIAT1Q6ZQX7 453 aa14.38□□□□□ -0.11
COL12A1-209ENST00000493109 ANKLE1Q8NAG6 615 aa14.38□□□□□ -0.11
COL12A1-209ENST00000493109 ADH1BP00325 375 aa14.35□□□□□ -0.11
COL12A1-209ENST00000493109 FECHP22830 423 aa14.35□□□□□ -0.11
COL12A1-209ENST00000493109 PLA2G2CQ5R387 149 aa14.35□□□□□ -0.11
COL12A1-209ENST00000493109 RBM26Q5T8P6 1007 aaKnown RBP14.35□□□□□ -0.11
COL12A1-209ENST00000493109 GPR37O15354 613 aa14.34□□□□□ -0.11
COL12A1-209ENST00000493109 METTL3Q86U44 580 aaKnown RBP14.34□□□□□ -0.11
COL12A1-209ENST00000493109 TESPA1A2RU30 521 aaPredicted RBP14.33□□□□□ -0.12
COL12A1-209ENST00000493109 ZNF598Q86UK7 904 aaKnown RBP14.33□□□□□ -0.12
COL12A1-209ENST00000493109 HIC1Q14526 733 aa14.31□□□□□ -0.12
COL12A1-209ENST00000493109 PUS10Q3MIT2 529 aaKnown RBP14.31□□□□□ -0.12
COL12A1-209ENST00000493109 OATP04181 439 aa14.3□□□□□ -0.12
COL12A1-209ENST00000493109 ZNF787Q6DD87 383 aa14.3□□□□□ -0.12
COL12A1-209ENST00000493109 NR1I2O75469 434 aa14.29□□□□□ -0.12
COL12A1-209ENST00000493109 PRR20EP86478 221 aa14.29□□□□□ -0.12
COL12A1-209ENST00000493109 PRR20CP86479 221 aa14.29□□□□□ -0.12
COL12A1-209ENST00000493109 PRR20DP86480 221 aa14.29□□□□□ -0.12
COL12A1-209ENST00000493109 PRR20BP86481 221 aa14.29□□□□□ -0.12
COL12A1-209ENST00000493109 PRR20AP86496 221 aa14.29□□□□□ -0.12
COL12A1-209ENST00000493109 SCUBE3Q8IX30 993 aa14.29□□□□□ -0.12
COL12A1-209ENST00000493109 GDF9O60383 454 aa14.28□□□□□ -0.12
COL12A1-209ENST00000493109 ZNF697Q5TEC3 545 aa14.28□□□□□ -0.12
COL12A1-209ENST00000493109 SLC6A16Q9GZN6 736 aa14.27□□□□□ -0.13
COL12A1-209ENST00000493109 MYT1Q01538 1121 aa14.26□□□□□ -0.13
COL12A1-209ENST00000493109 NLRP7Q8WX94 980 aa14.26□□□□□ -0.13
COL12A1-209ENST00000493109 TNFRSF10AO00220 468 aa14.23□□□□□ -0.13
COL12A1-209ENST00000493109 GNPATO15228 680 aa14.23□□□□□ -0.13
COL12A1-209ENST00000493109 DGAT1O75907 488 aa14.21□□□□□ -0.13
COL12A1-209ENST00000493109 PKDCCQ504Y2 493 aa14.21□□□□□ -0.13
COL12A1-209ENST00000493109 ZNF775Q96BV0 537 aaPredicted RBP14.21□□□□□ -0.13
COL12A1-209ENST00000493109 PHOX2BQ99453 314 aa14.21□□□□□ -0.13
COL12A1-209ENST00000493109 POTECB2RU33 542 aa14.2□□□□□ -0.14
COL12A1-209ENST00000493109 SPSB2Q99619 263 aa14.2□□□□□ -0.14
COL12A1-209ENST00000493109 MORN1Q5T089 497 aa14.19□□□□□ -0.14
COL12A1-209ENST00000493109 THAP11Q96EK4 314 aa14.19□□□□□ -0.14
COL12A1-209ENST00000493109 DAXXQ9UER7 740 aaPredicted RBP14.19□□□□□ -0.14
COL12A1-209ENST00000493109 PKD2L1Q9P0L9 805 aa14.18□□□□□ -0.14
COL12A1-209ENST00000493109 FUT2Q10981 343 aa14.17□□□□□ -0.14
COL12A1-209ENST00000493109 FAM187AA6NFU0 413 aa14.16□□□□□ -0.14
COL12A1-209ENST00000493109 RDH13Q8NBN7 331 aa14.15□□□□□ -0.14
COL12A1-209ENST00000493109 DDX11L8A8MPP1 907 aa14.14□□□□□ -0.15
COL12A1-209ENST00000493109 PLCB2Q00722 1185 aa14.14□□□□□ -0.15
COL12A1-209ENST00000493109 FAM160A2Q8N612 972 aaPredicted RBP14.14□□□□□ -0.15
COL12A1-209ENST00000493109 RSPH4AQ5TD94 716 aa14.13□□□□□ -0.15
COL12A1-209ENST00000493109 PRDM9Q9NQV7 894 aa14.12□□□□□ -0.15
COL12A1-209ENST00000493109 SLC27A5Q9Y2P5 690 aa14.12□□□□□ -0.15
COL12A1-209ENST00000493109 ST8SIA5O15466 376 aa14.11□□□□□ -0.15
COL12A1-209ENST00000493109 GCGRP47871 477 aa14.11□□□□□ -0.15
COL12A1-209ENST00000493109 SMYD5Q6GMV2 418 aa14.11□□□□□ -0.15
COL12A1-209ENST00000493109 FCF1Q9Y324 198 aaKnown RBP14.1□□□□□ -0.15
COL12A1-209ENST00000493109 ATP6V1AP38606 617 aa14.09□□□□□ -0.15
COL12A1-209ENST00000493109 FOXC1Q12948 553 aa14.08□□□□□ -0.16
COL12A1-209ENST00000493109 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
COL12A1-209ENST00000493109 RNF19BQ6ZMZ0 732 aa14.06□□□□□ -0.16
COL12A1-209ENST00000493109 RPIAP49247 311 aa14.05□□□□□ -0.16
COL12A1-209ENST00000493109 BRICD5Q6PL45 260 aa14.05□□□□□ -0.16
COL12A1-209ENST00000493109 FMNL1O95466 1100 aaPredicted RBP14.04□□□□□ -0.16
COL12A1-209ENST00000493109 TOR4AQ9NXH8 423 aa14.03□□□□□ -0.16
COL12A1-209ENST00000493109 LMOD2Q6P5Q4 547 aa14.02□□□□□ -0.17
COL12A1-209ENST00000493109 GPIHBP1Q8IV16 184 aa14.02□□□□□ -0.17
COL12A1-209ENST00000493109 SALL2Q9Y467 1007 aaPredicted RBP14.02□□□□□ -0.17
COL12A1-209ENST00000493109 SULF1Q8IWU6 871 aa14.01□□□□□ -0.17
COL12A1-209ENST00000493109 DACH1Q9UI36 760 aa14.01□□□□□ -0.17
COL12A1-209ENST00000493109 MSS51Q4VC12 460 aa13.98□□□□□ -0.17
COL12A1-209ENST00000493109 KDM2AQ9Y2K7 1162 aa13.98□□□□□ -0.17
COL12A1-209ENST00000493109 AVPP01185 164 aa13.97□□□□□ -0.17
COL12A1-209ENST00000493109 CRIPAKQ8N1N5 446 aa13.97□□□□□ -0.17
COL12A1-209ENST00000493109 CD46P15529 392 aa13.95□□□□□ -0.18
COL12A1-209ENST00000493109 LCE2AQ5TA79 106 aaPredicted RBP13.95□□□□□ -0.18
COL12A1-209ENST00000493109 CD2BP2O95400 341 aaKnown RBP13.94□□□□□ -0.18
COL12A1-209ENST00000493109 HLA-CQ95604 372 aa13.92□□□□□ -0.18
COL12A1-209ENST00000493109 CYP4X1Q8N118 509 aa13.91□□□□□ -0.18
COL12A1-209ENST00000493109 MMP16P51512 607 aa13.9□□□□□ -0.18
COL12A1-209ENST00000493109 MAP2K5Q13163 448 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms