RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-205ENST00000493026 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
PSMD11-205ENST00000493026 IQGAP3Q86VI3 1631 aa17.06■□□□□ 0.32
PSMD11-205ENST00000493026 MAGI2Q86UL8 1455 aa17.05■□□□□ 0.32
PSMD11-205ENST00000493026 ARHGAP5Q13017 1502 aa17.05■□□□□ 0.32
PSMD11-205ENST00000493026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.05■□□□□ 0.32
PSMD11-205ENST00000493026 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
PSMD11-205ENST00000493026 PDE3BQ13370 1112 aa17.04■□□□□ 0.32
PSMD11-205ENST00000493026 EIF2AK4Q9P2K8 1649 aaKnown RBP17.04■□□□□ 0.32
PSMD11-205ENST00000493026 ERBINQ96RT1 1412 aa17.04■□□□□ 0.32
PSMD11-205ENST00000493026 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
PSMD11-205ENST00000493026 A2MP01023 1474 aa17.03■□□□□ 0.32
PSMD11-205ENST00000493026 PRDM15P57071 1507 aaPredicted RBP17.03■□□□□ 0.32
PSMD11-205ENST00000493026 ABCC2Q92887 1545 aa17.03■□□□□ 0.32
PSMD11-205ENST00000493026 TTC37Q6PGP7 1564 aa17.02■□□□□ 0.32
PSMD11-205ENST00000493026 COL17A1Q9UMD9 1497 aaPredicted RBP17.02■□□□□ 0.32
PSMD11-205ENST00000493026 PER1O15534 1290 aaPredicted RBP17.02■□□□□ 0.31
PSMD11-205ENST00000493026 SPOCK2Q92563 424 aa17.02■□□□□ 0.31
PSMD11-205ENST00000493026 CCDC136Q96JN2 1154 aa17■□□□□ 0.31
PSMD11-205ENST00000493026 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
PSMD11-205ENST00000493026 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
PSMD11-205ENST00000493026 MYO5CQ9NQX4 1742 aa16.99■□□□□ 0.31
PSMD11-205ENST00000493026 TESK2Q96S53 571 aa16.99■□□□□ 0.31
PSMD11-205ENST00000493026 PLCH2O75038 1416 aa16.98■□□□□ 0.31
PSMD11-205ENST00000493026 APBB1O00213 710 aa16.98■□□□□ 0.31
PSMD11-205ENST00000493026 CDK11BP21127 795 aaKnown RBP16.97■□□□□ 0.31
PSMD11-205ENST00000493026 NBPF1Q3BBV0 1214 aa16.96■□□□□ 0.31
PSMD11-205ENST00000493026 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
PSMD11-205ENST00000493026 UHRF1BP1LA0JNW5 1464 aa16.96■□□□□ 0.3
PSMD11-205ENST00000493026 CNGB1Q14028 1251 aaPredicted RBP16.95■□□□□ 0.3
PSMD11-205ENST00000493026 KCTD17Q8N5Z5 321 aa16.95■□□□□ 0.3
PSMD11-205ENST00000493026 TMF1P82094 1093 aa16.94■□□□□ 0.3
PSMD11-205ENST00000493026 EFCAB2Q5VUJ9 269 aa16.94■□□□□ 0.3
PSMD11-205ENST00000493026 CHD1O14646 1710 aa16.94■□□□□ 0.3
PSMD11-205ENST00000493026 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
PSMD11-205ENST00000493026 RGL3Q3MIN7 710 aa16.94■□□□□ 0.3
PSMD11-205ENST00000493026 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
PSMD11-205ENST00000493026 RTEL1-TNFRSF6BF6WH68 1400 aa16.92■□□□□ 0.3
PSMD11-205ENST00000493026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.3
PSMD11-205ENST00000493026 RCAN3Q9UKA8 241 aa16.92■□□□□ 0.3
PSMD11-205ENST00000493026 ARAP3Q8WWN8 1544 aa16.92■□□□□ 0.3
PSMD11-205ENST00000493026 BLMP54132 1417 aaPredicted RBP16.92■□□□□ 0.3
PSMD11-205ENST00000493026 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
PSMD11-205ENST00000493026 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
PSMD11-205ENST00000493026 RAD21O60216 631 aa16.91■□□□□ 0.3
PSMD11-205ENST00000493026 ABCC1P33527 1531 aa16.9■□□□□ 0.3
PSMD11-205ENST00000493026 PANK3Q9H999 370 aa16.88■□□□□ 0.29
PSMD11-205ENST00000493026 CDCA8Q53HL2 280 aa16.87■□□□□ 0.29
PSMD11-205ENST00000493026 FOXD4L5Q5VV16 416 aaPredicted RBP16.87■□□□□ 0.29
PSMD11-205ENST00000493026 ZC3H15Q8WU90 426 aaKnown RBP16.87■□□□□ 0.29
PSMD11-205ENST00000493026 FOXD4L4Q8WXT5 416 aaPredicted RBP16.87■□□□□ 0.29
PSMD11-205ENST00000493026 SCAPERQ9BY12 1400 aa16.87■□□□□ 0.29
PSMD11-205ENST00000493026 PTPRTO14522 1441 aa16.86■□□□□ 0.29
PSMD11-205ENST00000493026 MTMR7Q9Y216 660 aa16.86■□□□□ 0.29
PSMD11-205ENST00000493026 TRPM2O94759 1503 aa16.86■□□□□ 0.29
PSMD11-205ENST00000493026 NOP58Q9Y2X3 529 aaKnown RBP16.85■□□□□ 0.29
PSMD11-205ENST00000493026 GPBP1L1Q9HC44 474 aaPredicted RBP16.85■□□□□ 0.29
PSMD11-205ENST00000493026 NEURL4Q96JN8 1562 aa16.84■□□□□ 0.29
PSMD11-205ENST00000493026 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
PSMD11-205ENST00000493026 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
PSMD11-205ENST00000493026 ANP32AP39687 249 aaKnown RBP16.84■□□□□ 0.29
PSMD11-205ENST00000493026 ERCC6L2Q5T890 1561 aa16.84■□□□□ 0.29
PSMD11-205ENST00000493026 ZCCHC11Q5TAX3 1644 aaKnown RBP16.84■□□□□ 0.29
PSMD11-205ENST00000493026 TRAPPC8Q9Y2L5 1435 aa16.84■□□□□ 0.29
PSMD11-205ENST00000493026 KCNV2Q8TDN2 545 aa16.84■□□□□ 0.29
PSMD11-205ENST00000493026 MADDQ8WXG6 1647 aa16.83■□□□□ 0.29
PSMD11-205ENST00000493026 WDR7Q9Y4E6 1490 aa16.83■□□□□ 0.28
PSMD11-205ENST00000493026 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
PSMD11-205ENST00000493026 SPAG9O60271 1321 aaKnown RBP16.82■□□□□ 0.28
PSMD11-205ENST00000493026 MS4A1P11836 297 aa16.82■□□□□ 0.28
PSMD11-205ENST00000493026 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
PSMD11-205ENST00000493026 CC2D1BQ5T0F9 858 aaKnown RBP16.81■□□□□ 0.28
PSMD11-205ENST00000493026 IPO9Q96P70 1041 aaKnown RBP16.81■□□□□ 0.28
PSMD11-205ENST00000493026 SCAF11Q99590 1463 aaKnown RBP16.81■□□□□ 0.28
PSMD11-205ENST00000493026 IQGAP1P46940 1657 aa16.81■□□□□ 0.28
PSMD11-205ENST00000493026 DHX37Q8IY37 1157 aaKnown RBP16.8■□□□□ 0.28
PSMD11-205ENST00000493026 EXOC6Q8TAG9 804 aa16.8■□□□□ 0.28
PSMD11-205ENST00000493026 DEPDC5O75140 1603 aa16.8■□□□□ 0.28
PSMD11-205ENST00000493026 ZFYVE16Q7Z3T8 1539 aa16.8■□□□□ 0.28
PSMD11-205ENST00000493026 HS6ST3Q8IZP7 471 aa16.8■□□□□ 0.28
PSMD11-205ENST00000493026 SYNMO15061 1565 aa16.79■□□□□ 0.28
PSMD11-205ENST00000493026 RGS22Q8NE09 1264 aa16.79■□□□□ 0.28
PSMD11-205ENST00000493026 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
PSMD11-205ENST00000493026 KNSTRNQ9Y448 316 aa16.78■□□□□ 0.28
PSMD11-205ENST00000493026 SPHKAPQ2M3C7 1700 aa16.78■□□□□ 0.28
PSMD11-205ENST00000493026 EIF3AQ14152 1382 aaKnown RBP16.78■□□□□ 0.28
PSMD11-205ENST00000493026 VWDEQ8N2E2 1590 aa16.78■□□□□ 0.28
PSMD11-205ENST00000493026 RBM25P49756 843 aaKnown RBP16.77■□□□□ 0.28
PSMD11-205ENST00000493026 TET3O43151 1660 aa16.77■□□□□ 0.27
PSMD11-205ENST00000493026 KANK1Q14678 1352 aa16.77■□□□□ 0.27
PSMD11-205ENST00000493026 CEP152O94986 1710 aa16.76■□□□□ 0.27
PSMD11-205ENST00000493026 PIK3C2GO75747 1445 aa16.76■□□□□ 0.27
PSMD11-205ENST00000493026 KIAA1210Q9ULL0 1709 aa16.76■□□□□ 0.27
PSMD11-205ENST00000493026 CDCA7LQ96GN5 454 aa16.76■□□□□ 0.27
PSMD11-205ENST00000493026 RNF25Q96BH1 459 aaPredicted RBP16.75■□□□□ 0.27
PSMD11-205ENST00000493026 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
PSMD11-205ENST00000493026 MKRN3Q13064 507 aaKnown RBP16.75■□□□□ 0.27
PSMD11-205ENST00000493026 PPP2R1AP30153 589 aa16.74■□□□□ 0.27
PSMD11-205ENST00000493026 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
PSMD11-205ENST00000493026 ASXL1Q8IXJ9 1541 aa16.74■□□□□ 0.27
PSMD11-205ENST00000493026 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms