RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 CCNB3Q8WWL7 1395 aa8.96□□□□□ -0.98
SEC13-219ENST00000492602 CCDC18Q5T9S5 1454 aa8.96□□□□□ -0.98
SEC13-219ENST00000492602 KDM5AP29375 1690 aaKnown RBP8.95□□□□□ -0.98
SEC13-219ENST00000492602 BRINP3Q76B58 766 aa8.95□□□□□ -0.98
SEC13-219ENST00000492602 LRRC59Q96AG4 307 aaKnown RBP8.95□□□□□ -0.98
SEC13-219ENST00000492602 MBD5Q9P267 1494 aa8.95□□□□□ -0.98
SEC13-219ENST00000492602 UBTFP17480 764 aaKnown RBP8.94□□□□□ -0.98
SEC13-219ENST00000492602 SF3B2Q13435 895 aaKnown RBP8.94□□□□□ -0.98
SEC13-219ENST00000492602 BLMP54132 1417 aaPredicted RBP8.94□□□□□ -0.98
SEC13-219ENST00000492602 C19orf44Q9H6X5 657 aa8.93□□□□□ -0.98
SEC13-219ENST00000492602 SETD5Q9C0A6 1442 aa8.93□□□□□ -0.98
SEC13-219ENST00000492602 TET3O43151 1660 aa8.93□□□□□ -0.98
SEC13-219ENST00000492602 CFAP65Q6ZU64 1925 aaKnown RBP8.92□□□□□ -0.98
SEC13-219ENST00000492602 NHSL1Q5SYE7 1610 aa8.92□□□□□ -0.98
SEC13-219ENST00000492602 NCOA3Q9Y6Q9 1424 aa8.91□□□□□ -0.98
SEC13-219ENST00000492602 MAST1Q9Y2H9 1570 aa8.9□□□□□ -0.98
SEC13-219ENST00000492602 CASKIN1Q8WXD9 1431 aa8.9□□□□□ -0.98
SEC13-219ENST00000492602 PNPLA6Q8IY17 1366 aa8.9□□□□□ -0.98
SEC13-219ENST00000492602 EEA1Q15075 1411 aa8.89□□□□□ -0.99
SEC13-219ENST00000492602 FNBP4Q8N3X1 1017 aaPredicted RBP8.89□□□□□ -0.99
SEC13-219ENST00000492602 DDX17Q92841 729 aaKnown RBP8.89□□□□□ -0.99
SEC13-219ENST00000492602 PIK3C2BO00750 1634 aa8.89□□□□□ -0.99
SEC13-219ENST00000492602 ATRNO75882 1429 aa8.88□□□□□ -0.99
SEC13-219ENST00000492602 IDI1Q13907 227 aa8.88□□□□□ -0.99
SEC13-219ENST00000492602 EFCAB6Q5THR3 1501 aa8.88□□□□□ -0.99
SEC13-219ENST00000492602 CAMSAP2Q08AD1 1489 aa8.88□□□□□ -0.99
SEC13-219ENST00000492602 CCDC141Q6ZP82 1450 aa8.88□□□□□ -0.99
SEC13-219ENST00000492602 BCL9LQ86UU0 1499 aa8.88□□□□□ -0.99
SEC13-219ENST00000492602 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.88□□□□□ -0.99
SEC13-219ENST00000492602 ASXL1Q8IXJ9 1541 aa8.87□□□□□ -0.99
SEC13-219ENST00000492602 DCAF8L1A6NGE4 600 aa8.87□□□□□ -0.99
SEC13-219ENST00000492602 TSPY4P0CV99 314 aa8.87□□□□□ -0.99
SEC13-219ENST00000492602 TSPY10P0CW01 314 aa8.87□□□□□ -0.99
SEC13-219ENST00000492602 RSPH4AQ5TD94 716 aa8.87□□□□□ -0.99
SEC13-219ENST00000492602 GJD4Q96KN9 370 aaPredicted RBP8.87□□□□□ -0.99
SEC13-219ENST00000492602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.87□□□□□ -0.99
SEC13-219ENST00000492602 MROH1Q8NDA8 1641 aa8.87□□□□□ -0.99
SEC13-219ENST00000492602 R3HDM1Q15032 1099 aaKnown RBP8.86□□□□□ -0.99
SEC13-219ENST00000492602 PPP1R15AO75807 674 aaPredicted RBP8.85□□□□□ -0.99
SEC13-219ENST00000492602 CHD2O14647 1828 aaKnown RBP8.84□□□□□ -0.99
SEC13-219ENST00000492602 CEP152O94986 1710 aa8.84□□□□□ -0.99
SEC13-219ENST00000492602 BAG6P46379 1132 aa8.84□□□□□ -0.99
SEC13-219ENST00000492602 C1QTNF8P60827 252 aa8.84□□□□□ -0.99
SEC13-219ENST00000492602 ARHGAP31Q2M1Z3 1444 aa8.84□□□□□ -0.99
SEC13-219ENST00000492602 ZNF784Q8NCA9 323 aaPredicted RBP8.84□□□□□ -0.99
SEC13-219ENST00000492602 MTUS2Q5JR59 1369 aa8.84□□□□□ -0.99
SEC13-219ENST00000492602 TBX22Q9Y458 520 aa8.83□□□□□ -1
SEC13-219ENST00000492602 PTCH1Q13635 1447 aa8.82□□□□□ -1
SEC13-219ENST00000492602 PLEKHG1Q9ULL1 1385 aa8.82□□□□□ -1
SEC13-219ENST00000492602 FYCO1Q9BQS8 1478 aa8.82□□□□□ -1
SEC13-219ENST00000492602 MST1RQ04912 1400 aa8.81□□□□□ -1
SEC13-219ENST00000492602 HDGFP51858 240 aaKnown RBP8.81□□□□□ -1
SEC13-219ENST00000492602 EN1Q05925 392 aaPredicted RBP8.8□□□□□ -1
SEC13-219ENST00000492602 AMOTL2Q9Y2J4 779 aa8.8□□□□□ -1
SEC13-219ENST00000492602 DCCP43146 1447 aa8.8□□□□□ -1
SEC13-219ENST00000492602 UNC13BO14795 1591 aa8.79□□□□□ -1
SEC13-219ENST00000492602 SEPT12Q8IYM1 358 aa8.79□□□□□ -1
SEC13-219ENST00000492602 PPP1R1BQ9UD71 204 aaPredicted RBP8.79□□□□□ -1
SEC13-219ENST00000492602 KRT27Q7Z3Y8 459 aa8.78□□□□□ -1
SEC13-219ENST00000492602 EIF2AK4Q9P2K8 1649 aaKnown RBP8.78□□□□□ -1
SEC13-219ENST00000492602 ADGRB3O60242 1522 aa8.78□□□□□ -1
SEC13-219ENST00000492602 RALGAPBQ86X10 1494 aa8.77□□□□□ -1
SEC13-219ENST00000492602 UNC5CLQ8IV45 518 aa8.77□□□□□ -1.01
SEC13-219ENST00000492602 SLC52A1Q9NWF4 448 aa8.77□□□□□ -1.01
SEC13-219ENST00000492602 RIMS2Q9UQ26 1411 aa8.77□□□□□ -1.01
SEC13-219ENST00000492602 SOS2Q07890 1332 aaPredicted RBP8.77□□□□□ -1.01
SEC13-219ENST00000492602 PIK3R4Q99570 1358 aa8.76□□□□□ -1.01
SEC13-219ENST00000492602 ZFYVE9O95405 1425 aa8.76□□□□□ -1.01
SEC13-219ENST00000492602 ADAMTS13Q76LX8 1427 aa8.76□□□□□ -1.01
SEC13-219ENST00000492602 GLI3P10071 1580 aa8.75□□□□□ -1.01
SEC13-219ENST00000492602 BRWD3Q6RI45 1802 aa8.75□□□□□ -1.01
SEC13-219ENST00000492602 UTRNP46939 3433 aa8.74□□□□□ -1.01
SEC13-219ENST00000492602 ARHGEF5Q12774 1597 aa8.74□□□□□ -1.01
SEC13-219ENST00000492602 A0A0G2JS52 829 aa8.74□□□□□ -1.01
SEC13-219ENST00000492602 MYT1Q01538 1121 aa8.74□□□□□ -1.01
SEC13-219ENST00000492602 EZH2Q15910 746 aaKnown RBP8.74□□□□□ -1.01
SEC13-219ENST00000492602 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.74□□□□□ -1.01
SEC13-219ENST00000492602 SPHKAPQ2M3C7 1700 aa8.74□□□□□ -1.01
SEC13-219ENST00000492602 KANK1Q14678 1352 aa8.73□□□□□ -1.01
SEC13-219ENST00000492602 CEP162Q5TB80 1403 aa8.73□□□□□ -1.01
SEC13-219ENST00000492602 PTPRUQ92729 1446 aa8.73□□□□□ -1.01
SEC13-219ENST00000492602 CHGAP10645 457 aaKnown RBP8.73□□□□□ -1.01
SEC13-219ENST00000492602 ORAI2Q96SN7 254 aa8.73□□□□□ -1.01
SEC13-219ENST00000492602 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
SEC13-219ENST00000492602 EHBP1L1Q8N3D4 1523 aa8.73□□□□□ -1.01
SEC13-219ENST00000492602 NINLQ9Y2I6 1382 aa8.73□□□□□ -1.01
SEC13-219ENST00000492602 NOS1P29475 1434 aa8.72□□□□□ -1.01
SEC13-219ENST00000492602 MYOM2P54296 1465 aa8.72□□□□□ -1.01
SEC13-219ENST00000492602 TRPM2O94759 1503 aa8.72□□□□□ -1.01
SEC13-219ENST00000492602 C1orf167Q5SNV9 1468 aa8.71□□□□□ -1.01
SEC13-219ENST00000492602 DUOX2Q9NRD8 1548 aa8.71□□□□□ -1.01
SEC13-219ENST00000492602 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.02
SEC13-219ENST00000492602 SPON1Q9HCB6 807 aa8.71□□□□□ -1.02
SEC13-219ENST00000492602 CEP350Q5VT06 3117 aa8.71□□□□□ -1.02
SEC13-219ENST00000492602 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.02
SEC13-219ENST00000492602 COL22A1Q8NFW1 1626 aaPredicted RBP8.7□□□□□ -1.02
SEC13-219ENST00000492602 CAMTA1Q9Y6Y1 1673 aa8.7□□□□□ -1.02
SEC13-219ENST00000492602 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
SEC13-219ENST00000492602 SLIT2O94813 1529 aa8.7□□□□□ -1.02
SEC13-219ENST00000492602 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms