RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 DNAJB2P25686 324 aa9.5□□□□□ -0.89
VTA1-204ENST00000491881 BLOC1S3Q6QNY0 202 aa9.5□□□□□ -0.89
VTA1-204ENST00000491881 PTGDRQ13258 359 aa9.49□□□□□ -0.89
VTA1-204ENST00000491881 RBM46Q8TBY0 533 aaKnown RBP9.49□□□□□ -0.89
VTA1-204ENST00000491881 VSIG10Q8N0Z9 540 aa9.48□□□□□ -0.89
VTA1-204ENST00000491881 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
VTA1-204ENST00000491881 KMT5BQ4FZB7 885 aa9.46□□□□□ -0.9
VTA1-204ENST00000491881 ZNF787Q6DD87 383 aa9.46□□□□□ -0.9
VTA1-204ENST00000491881 KCNV2Q8TDN2 545 aa9.46□□□□□ -0.9
VTA1-204ENST00000491881 TMEM134Q9H6X4 195 aa9.46□□□□□ -0.9
VTA1-204ENST00000491881 TSHZ2Q9NRE2 1034 aa9.46□□□□□ -0.9
VTA1-204ENST00000491881 NUTM2FA1L443 756 aa9.45□□□□□ -0.9
VTA1-204ENST00000491881 TLL1O43897 1013 aa9.45□□□□□ -0.9
VTA1-204ENST00000491881 SLC19A1P41440 591 aa9.45□□□□□ -0.9
VTA1-204ENST00000491881 ADGRG1Q9Y653 693 aa9.45□□□□□ -0.9
VTA1-204ENST00000491881 RCCD1A6NED2 376 aa9.43□□□□□ -0.9
VTA1-204ENST00000491881 ACTN4O43707 911 aaKnown RBP9.43□□□□□ -0.9
VTA1-204ENST00000491881 CFHP08603 1231 aa9.42□□□□□ -0.9
VTA1-204ENST00000491881 FAM161AQ3B820 660 aa9.42□□□□□ -0.9
VTA1-204ENST00000491881 TRIM67Q6ZTA4 783 aa9.41□□□□□ -0.9
VTA1-204ENST00000491881 ANKLE1Q8NAG6 615 aa9.41□□□□□ -0.9
VTA1-204ENST00000491881 PPEF1O14829 653 aaPredicted RBP9.4□□□□□ -0.9
VTA1-204ENST00000491881 S1PR4O95977 384 aa9.4□□□□□ -0.9
VTA1-204ENST00000491881 SPRYD7Q5W111 196 aa9.4□□□□□ -0.9
VTA1-204ENST00000491881 EMID1Q96A84 441 aaPredicted RBP9.4□□□□□ -0.9
VTA1-204ENST00000491881 PKDCCQ504Y2 493 aa9.39□□□□□ -0.91
VTA1-204ENST00000491881 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
VTA1-204ENST00000491881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.38□□□□□ -0.91
VTA1-204ENST00000491881 NR1I2O75469 434 aa9.38□□□□□ -0.91
VTA1-204ENST00000491881 FCHSD2O94868 740 aa9.38□□□□□ -0.91
VTA1-204ENST00000491881 KDM2AQ9Y2K7 1162 aa9.38□□□□□ -0.91
VTA1-204ENST00000491881 ADH1BP00325 375 aa9.37□□□□□ -0.91
VTA1-204ENST00000491881 SLC10A3P09131 477 aa9.37□□□□□ -0.91
VTA1-204ENST00000491881 PRR20EP86478 221 aa9.36□□□□□ -0.91
VTA1-204ENST00000491881 PRR20CP86479 221 aa9.36□□□□□ -0.91
VTA1-204ENST00000491881 PRR20DP86480 221 aa9.36□□□□□ -0.91
VTA1-204ENST00000491881 PRR20BP86481 221 aa9.36□□□□□ -0.91
VTA1-204ENST00000491881 PRR20AP86496 221 aa9.36□□□□□ -0.91
VTA1-204ENST00000491881 ZNF697Q5TEC3 545 aa9.36□□□□□ -0.91
VTA1-204ENST00000491881 LIAT1Q6ZQX7 453 aa9.36□□□□□ -0.91
VTA1-204ENST00000491881 P3H3Q8IVL6 736 aa9.36□□□□□ -0.91
VTA1-204ENST00000491881 DGAT1O75907 488 aa9.35□□□□□ -0.91
VTA1-204ENST00000491881 OATP04181 439 aa9.34□□□□□ -0.91
VTA1-204ENST00000491881 ZNF775Q96BV0 537 aaPredicted RBP9.34□□□□□ -0.91
VTA1-204ENST00000491881 SLC6A16Q9GZN6 736 aa9.34□□□□□ -0.91
VTA1-204ENST00000491881 SEMA3EO15041 775 aa9.33□□□□□ -0.92
VTA1-204ENST00000491881 MYT1Q01538 1121 aa9.33□□□□□ -0.92
VTA1-204ENST00000491881 RSPH4AQ5TD94 716 aa9.33□□□□□ -0.92
VTA1-204ENST00000491881 PXYLP1Q8TE99 480 aa9.33□□□□□ -0.92
VTA1-204ENST00000491881 FAM187AA6NFU0 413 aa9.32□□□□□ -0.92
VTA1-204ENST00000491881 TNFRSF10AO00220 468 aa9.32□□□□□ -0.92
VTA1-204ENST00000491881 SCUBE3Q8IX30 993 aa9.32□□□□□ -0.92
VTA1-204ENST00000491881 GDF9O60383 454 aa9.3□□□□□ -0.92
VTA1-204ENST00000491881 PUS10Q3MIT2 529 aaKnown RBP9.3□□□□□ -0.92
VTA1-204ENST00000491881 HIC1Q14526 733 aa9.29□□□□□ -0.92
VTA1-204ENST00000491881 PLA2G2CQ5R387 149 aa9.29□□□□□ -0.92
VTA1-204ENST00000491881 METTL3Q86U44 580 aaKnown RBP9.29□□□□□ -0.92
VTA1-204ENST00000491881 SPSB2Q99619 263 aa9.29□□□□□ -0.92
VTA1-204ENST00000491881 RDH13Q8NBN7 331 aa9.26□□□□□ -0.93
VTA1-204ENST00000491881 FOXC1Q12948 553 aa9.25□□□□□ -0.93
VTA1-204ENST00000491881 BCANQ96GW7 911 aa9.25□□□□□ -0.93
VTA1-204ENST00000491881 POTECB2RU33 542 aa9.24□□□□□ -0.93
VTA1-204ENST00000491881 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
VTA1-204ENST00000491881 SMYD5Q6GMV2 418 aa9.23□□□□□ -0.93
VTA1-204ENST00000491881 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
VTA1-204ENST00000491881 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
VTA1-204ENST00000491881 GNPATO15228 680 aa9.22□□□□□ -0.93
VTA1-204ENST00000491881 ST8SIA5O15466 376 aa9.22□□□□□ -0.93
VTA1-204ENST00000491881 LMOD2Q6P5Q4 547 aa9.22□□□□□ -0.93
VTA1-204ENST00000491881 FECHP22830 423 aa9.21□□□□□ -0.94
VTA1-204ENST00000491881 FUT2Q10981 343 aa9.21□□□□□ -0.94
VTA1-204ENST00000491881 MORN1Q5T089 497 aa9.21□□□□□ -0.94
VTA1-204ENST00000491881 AAASQ9NRG9 546 aa9.21□□□□□ -0.94
VTA1-204ENST00000491881 PKD2L1Q9P0L9 805 aa9.21□□□□□ -0.94
VTA1-204ENST00000491881 FCF1Q9Y324 198 aaKnown RBP9.21□□□□□ -0.94
VTA1-204ENST00000491881 TESPA1A2RU30 521 aaPredicted RBP9.2□□□□□ -0.94
VTA1-204ENST00000491881 ATP6V1AP38606 617 aa9.2□□□□□ -0.94
VTA1-204ENST00000491881 RPIAP49247 311 aa9.2□□□□□ -0.94
VTA1-204ENST00000491881 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
VTA1-204ENST00000491881 FMNL1O95466 1100 aaPredicted RBP9.19□□□□□ -0.94
VTA1-204ENST00000491881 SULF1Q8IWU6 871 aa9.18□□□□□ -0.94
VTA1-204ENST00000491881 NLRP7Q8WX94 980 aa9.18□□□□□ -0.94
VTA1-204ENST00000491881 THAP11Q96EK4 314 aa9.18□□□□□ -0.94
VTA1-204ENST00000491881 SLC27A5Q9Y2P5 690 aa9.17□□□□□ -0.94
VTA1-204ENST00000491881 GCGRP47871 477 aa9.16□□□□□ -0.94
VTA1-204ENST00000491881 CYP4X1Q8N118 509 aa9.16□□□□□ -0.94
VTA1-204ENST00000491881 FAM160A2Q8N612 972 aaPredicted RBP9.16□□□□□ -0.94
VTA1-204ENST00000491881 GPR37O15354 613 aa9.15□□□□□ -0.94
VTA1-204ENST00000491881 ZBTB24O43167 697 aaPredicted RBP9.14□□□□□ -0.95
VTA1-204ENST00000491881 CRIPAKQ8N1N5 446 aa9.14□□□□□ -0.95
VTA1-204ENST00000491881 PRDM9Q9NQV7 894 aa9.14□□□□□ -0.95
VTA1-204ENST00000491881 TOR4AQ9NXH8 423 aa9.14□□□□□ -0.95
VTA1-204ENST00000491881 SALL2Q9Y467 1007 aaPredicted RBP9.14□□□□□ -0.95
VTA1-204ENST00000491881 AXIN1O15169 862 aa9.12□□□□□ -0.95
VTA1-204ENST00000491881 AVPP01185 164 aa9.12□□□□□ -0.95
VTA1-204ENST00000491881 GRIPAP1Q4V328 841 aa9.12□□□□□ -0.95
VTA1-204ENST00000491881 BRICD5Q6PL45 260 aa9.12□□□□□ -0.95
VTA1-204ENST00000491881 TREML4Q6UXN2 200 aa9.12□□□□□ -0.95
VTA1-204ENST00000491881 PHOX2BQ99453 314 aa9.12□□□□□ -0.95
VTA1-204ENST00000491881 CTC1Q2NKJ3 1217 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms