RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 THEMISQ8N1K5 641 aaPredicted RBP12.08□□□□□ -0.48
RNF38-209ENST00000491349 CCDC144AA2RUR9 1427 aa12.08□□□□□ -0.48
RNF38-209ENST00000491349 TRPM2O94759 1503 aa12.07□□□□□ -0.48
RNF38-209ENST00000491349 ZNF142P52746 1687 aaPredicted RBP12.07□□□□□ -0.48
RNF38-209ENST00000491349 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
RNF38-209ENST00000491349 NOS1P29475 1434 aa12.07□□□□□ -0.48
RNF38-209ENST00000491349 A2ML1A8K2U0 1454 aa12.07□□□□□ -0.48
RNF38-209ENST00000491349 CEP170BQ9Y4F5 1589 aaPredicted RBP12.06□□□□□ -0.48
RNF38-209ENST00000491349 KDM5AP29375 1690 aaKnown RBP12.06□□□□□ -0.48
RNF38-209ENST00000491349 UGGT1Q9NYU2 1555 aa12.05□□□□□ -0.48
RNF38-209ENST00000491349 PTPRTO14522 1441 aa12.04□□□□□ -0.48
RNF38-209ENST00000491349 ZNF326Q5BKZ1 582 aaKnown RBP12.04□□□□□ -0.48
RNF38-209ENST00000491349 EID1Q9Y6B2 187 aa12.04□□□□□ -0.48
RNF38-209ENST00000491349 SYNMO15061 1565 aa12.04□□□□□ -0.48
RNF38-209ENST00000491349 PIK3C2BO00750 1634 aa12.04□□□□□ -0.48
RNF38-209ENST00000491349 ADGRB3O60242 1522 aa12.02□□□□□ -0.48
RNF38-209ENST00000491349 IDI1Q13907 227 aa12.02□□□□□ -0.49
RNF38-209ENST00000491349 CCER1Q8TC90 406 aaPredicted RBP12.02□□□□□ -0.49
RNF38-209ENST00000491349 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
RNF38-209ENST00000491349 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
RNF38-209ENST00000491349 PPP1R15AO75807 674 aaPredicted RBP12.01□□□□□ -0.49
RNF38-209ENST00000491349 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNF38-209ENST00000491349 ANKLE2Q86XL3 938 aa12□□□□□ -0.49
RNF38-209ENST00000491349 CLSPNQ9HAW4 1339 aa12□□□□□ -0.49
RNF38-209ENST00000491349 DHX57Q6P158 1386 aaKnown RBP12□□□□□ -0.49
RNF38-209ENST00000491349 ANKRD30BQ9BXX2 1392 aa11.99□□□□□ -0.49
RNF38-209ENST00000491349 LMTK3Q96Q04 1460 aa11.99□□□□□ -0.49
RNF38-209ENST00000491349 MYO5BQ9ULV0 1848 aa11.98□□□□□ -0.49
RNF38-209ENST00000491349 TMEM131LA2VDJ0 1609 aa11.98□□□□□ -0.49
RNF38-209ENST00000491349 RPGRIP1LQ68CZ1 1315 aa11.98□□□□□ -0.49
RNF38-209ENST00000491349 AKT1S1Q96B36 256 aa11.98□□□□□ -0.49
RNF38-209ENST00000491349 BCANQ96GW7 911 aa11.98□□□□□ -0.49
RNF38-209ENST00000491349 POLR1AO95602 1720 aaPredicted RBP11.97□□□□□ -0.49
RNF38-209ENST00000491349 PLA2R1Q13018 1463 aa11.97□□□□□ -0.49
RNF38-209ENST00000491349 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
RNF38-209ENST00000491349 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.49
RNF38-209ENST00000491349 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
RNF38-209ENST00000491349 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.49
RNF38-209ENST00000491349 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
RNF38-209ENST00000491349 TMEM2Q9UHN6 1383 aa11.95□□□□□ -0.5
RNF38-209ENST00000491349 HSPA2P54652 639 aa11.95□□□□□ -0.5
RNF38-209ENST00000491349 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
RNF38-209ENST00000491349 RGL3Q3MIN7 710 aa11.95□□□□□ -0.5
RNF38-209ENST00000491349 RIMS2Q9UQ26 1411 aa11.94□□□□□ -0.5
RNF38-209ENST00000491349 SLIT1O75093 1534 aa11.94□□□□□ -0.5
RNF38-209ENST00000491349 SCAF11Q99590 1463 aaKnown RBP11.94□□□□□ -0.5
RNF38-209ENST00000491349 TONSLQ96HA7 1378 aa11.93□□□□□ -0.5
RNF38-209ENST00000491349 PPLO60437 1756 aa11.92□□□□□ -0.5
RNF38-209ENST00000491349 ARHGAP23Q9P227 1491 aa11.91□□□□□ -0.5
RNF38-209ENST00000491349 IQGAP1P46940 1657 aa11.91□□□□□ -0.5
RNF38-209ENST00000491349 NCKAP5LQ9HCH0 1330 aa11.89□□□□□ -0.51
RNF38-209ENST00000491349 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
RNF38-209ENST00000491349 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
RNF38-209ENST00000491349 DCAF11Q8TEB1 546 aa11.89□□□□□ -0.51
RNF38-209ENST00000491349 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
RNF38-209ENST00000491349 IFT172Q9UG01 1749 aa11.89□□□□□ -0.51
RNF38-209ENST00000491349 NEXMIFQ5QGS0 1516 aa11.88□□□□□ -0.51
RNF38-209ENST00000491349 SIN3AQ96ST3 1273 aa11.88□□□□□ -0.51
RNF38-209ENST00000491349 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
RNF38-209ENST00000491349 PLEKHG1Q9ULL1 1385 aa11.88□□□□□ -0.51
RNF38-209ENST00000491349 STRCQ7RTU9 1775 aa11.87□□□□□ -0.51
RNF38-209ENST00000491349 ZFYVE9O95405 1425 aa11.87□□□□□ -0.51
RNF38-209ENST00000491349 NUTM2DQ5VT03 806 aaPredicted RBP11.87□□□□□ -0.51
RNF38-209ENST00000491349 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
RNF38-209ENST00000491349 MED14O60244 1454 aa11.87□□□□□ -0.51
RNF38-209ENST00000491349 DIP2AQ14689 1571 aa11.87□□□□□ -0.51
RNF38-209ENST00000491349 LAMC1P11047 1609 aa11.86□□□□□ -0.51
RNF38-209ENST00000491349 LTKP29376 864 aa11.86□□□□□ -0.51
RNF38-209ENST00000491349 MYOM2P54296 1465 aa11.86□□□□□ -0.51
RNF38-209ENST00000491349 SETBP1Q9Y6X0 1596 aa11.83□□□□□ -0.52
RNF38-209ENST00000491349 L3MBTL2Q969R5 705 aa11.82□□□□□ -0.52
RNF38-209ENST00000491349 TBX22Q9Y458 520 aa11.82□□□□□ -0.52
RNF38-209ENST00000491349 PIK3R4Q99570 1358 aa11.81□□□□□ -0.52
RNF38-209ENST00000491349 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
RNF38-209ENST00000491349 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
RNF38-209ENST00000491349 ADGRF5Q8IZF2 1346 aa11.8□□□□□ -0.52
RNF38-209ENST00000491349 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
RNF38-209ENST00000491349 ALKQ9UM73 1620 aa11.79□□□□□ -0.52
RNF38-209ENST00000491349 PIK3C2GO75747 1445 aa11.79□□□□□ -0.52
RNF38-209ENST00000491349 ZEB1P37275 1124 aaPredicted RBP11.79□□□□□ -0.52
RNF38-209ENST00000491349 NRXN1Q9ULB1 1477 aa11.77□□□□□ -0.52
RNF38-209ENST00000491349 CHD2O14647 1828 aaKnown RBP11.77□□□□□ -0.52
RNF38-209ENST00000491349 C14orf93Q9H972 538 aaKnown RBP11.77□□□□□ -0.53
RNF38-209ENST00000491349 PRAG1Q86YV5 1406 aa11.77□□□□□ -0.53
RNF38-209ENST00000491349 CPS1P31327 1500 aa11.76□□□□□ -0.53
RNF38-209ENST00000491349 NRXN3Q9Y4C0 1643 aa11.76□□□□□ -0.53
RNF38-209ENST00000491349 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
RNF38-209ENST00000491349 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
RNF38-209ENST00000491349 KCNA6P17658 529 aa11.76□□□□□ -0.53
RNF38-209ENST00000491349 SPDYE2Q495Y8 402 aa11.76□□□□□ -0.53
RNF38-209ENST00000491349 ROCK2O75116 1388 aaKnown RBP11.76□□□□□ -0.53
RNF38-209ENST00000491349 ADAMTS13Q76LX8 1427 aa11.76□□□□□ -0.53
RNF38-209ENST00000491349 CFAP70Q5T0N1 1121 aa11.75□□□□□ -0.53
RNF38-209ENST00000491349 C14orf37Q86TY3 774 aa11.75□□□□□ -0.53
RNF38-209ENST00000491349 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
RNF38-209ENST00000491349 AMOTL2Q9Y2J4 779 aa11.74□□□□□ -0.53
RNF38-209ENST00000491349 EIF3AQ14152 1382 aaKnown RBP11.74□□□□□ -0.53
RNF38-209ENST00000491349 NKTRP30414 1462 aaKnown RBP11.74□□□□□ -0.53
RNF38-209ENST00000491349 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
RNF38-209ENST00000491349 SETD1AO15047 1707 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms