RNA–Protein interactions for RNA: ENST00000491166.1

TMCO3-208, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-208ENST00000491166 ROBO1Q9Y6N7 1651 aa19.01■□□□□ 0.63
TMCO3-208ENST00000491166 RPRD2Q5VT52 1461 aaKnown RBP18.99■□□□□ 0.63
TMCO3-208ENST00000491166 NUP155O75694 1391 aa18.99■□□□□ 0.63
TMCO3-208ENST00000491166 RRBP1Q9P2E9 1410 aaKnown RBP18.99■□□□□ 0.63
TMCO3-208ENST00000491166 ADGRB3O60242 1522 aa18.98■□□□□ 0.63
TMCO3-208ENST00000491166 SLC52A1Q9NWF4 448 aa18.97■□□□□ 0.63
TMCO3-208ENST00000491166 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
TMCO3-208ENST00000491166 GCC2Q8IWJ2 1684 aa18.95■□□□□ 0.62
TMCO3-208ENST00000491166 RBM33Q96EV2 1170 aaKnown RBP18.95■□□□□ 0.62
TMCO3-208ENST00000491166 E9PCH4 1651 aa18.95■□□□□ 0.62
TMCO3-208ENST00000491166 IQGAP3Q86VI3 1631 aa18.94■□□□□ 0.62
TMCO3-208ENST00000491166 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
TMCO3-208ENST00000491166 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
TMCO3-208ENST00000491166 BCANQ96GW7 911 aa18.93■□□□□ 0.62
TMCO3-208ENST00000491166 KDM5AP29375 1690 aaKnown RBP18.92■□□□□ 0.62
TMCO3-208ENST00000491166 MEX3CQ5U5Q3 659 aaKnown RBP18.91■□□□□ 0.62
TMCO3-208ENST00000491166 NUTM2DQ5VT03 806 aaPredicted RBP18.91■□□□□ 0.62
TMCO3-208ENST00000491166 JCADQ9P266 1359 aa18.91■□□□□ 0.62
TMCO3-208ENST00000491166 PHLPP1O60346 1717 aa18.91■□□□□ 0.62
TMCO3-208ENST00000491166 PPP1R15AO75807 674 aaPredicted RBP18.89■□□□□ 0.61
TMCO3-208ENST00000491166 NAIPQ13075 1403 aa18.89■□□□□ 0.61
TMCO3-208ENST00000491166 RIMS2Q9UQ26 1411 aa18.89■□□□□ 0.61
TMCO3-208ENST00000491166 TMEM131LA2VDJ0 1609 aa18.89■□□□□ 0.61
TMCO3-208ENST00000491166 LRP6O75581 1613 aa18.89■□□□□ 0.61
TMCO3-208ENST00000491166 MYO5BQ9ULV0 1848 aa18.88■□□□□ 0.61
TMCO3-208ENST00000491166 ZFYVE9O95405 1425 aa18.88■□□□□ 0.61
TMCO3-208ENST00000491166 ZNF772Q68DY9 489 aaPredicted RBP18.87■□□□□ 0.61
TMCO3-208ENST00000491166 PROSER2Q86WR7 435 aaPredicted RBP18.85■□□□□ 0.61
TMCO3-208ENST00000491166 RXRBP28702 533 aa18.84■□□□□ 0.61
TMCO3-208ENST00000491166 KCNA6P17658 529 aa18.83■□□□□ 0.6
TMCO3-208ENST00000491166 PLEKHG1Q9ULL1 1385 aa18.82■□□□□ 0.6
TMCO3-208ENST00000491166 HFM1A2PYH4 1435 aa18.81■□□□□ 0.6
TMCO3-208ENST00000491166 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
TMCO3-208ENST00000491166 COL16A1Q07092 1604 aaPredicted RBP18.8■□□□□ 0.6
TMCO3-208ENST00000491166 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.79■□□□□ 0.6
TMCO3-208ENST00000491166 SLAIN2Q9P270 581 aa18.79■□□□□ 0.6
TMCO3-208ENST00000491166 SPHKAPQ2M3C7 1700 aa18.78■□□□□ 0.6
TMCO3-208ENST00000491166 MSH6P52701 1360 aa18.78■□□□□ 0.6
TMCO3-208ENST00000491166 SPATA31A6Q5VVP1 1343 aa18.77■□□□□ 0.6
TMCO3-208ENST00000491166 ZNF326Q5BKZ1 582 aaKnown RBP18.77■□□□□ 0.6
TMCO3-208ENST00000491166 ADAMTS13Q76LX8 1427 aa18.76■□□□□ 0.59
TMCO3-208ENST00000491166 NWD1Q149M9 1564 aa18.76■□□□□ 0.59
TMCO3-208ENST00000491166 NKTRP30414 1462 aaKnown RBP18.74■□□□□ 0.59
TMCO3-208ENST00000491166 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
TMCO3-208ENST00000491166 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
TMCO3-208ENST00000491166 NUTM2AQ8IVF1 878 aaPredicted RBP18.74■□□□□ 0.59
TMCO3-208ENST00000491166 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
TMCO3-208ENST00000491166 TBX22Q9Y458 520 aa18.74■□□□□ 0.59
TMCO3-208ENST00000491166 CLTCL1P53675 1640 aa18.74■□□□□ 0.59
TMCO3-208ENST00000491166 CDK12Q9NYV4 1490 aaPredicted RBP18.73■□□□□ 0.59
TMCO3-208ENST00000491166 FOXD1Q16676 465 aa18.73■□□□□ 0.59
TMCO3-208ENST00000491166 TRPM2O94759 1503 aa18.72■□□□□ 0.59
TMCO3-208ENST00000491166 RGS12O14924 1447 aa18.7■□□□□ 0.58
TMCO3-208ENST00000491166 AFF2P51816 1311 aa18.7■□□□□ 0.58
TMCO3-208ENST00000491166 CHD2O14647 1828 aaKnown RBP18.69■□□□□ 0.58
TMCO3-208ENST00000491166 SETBP1Q9Y6X0 1596 aa18.68■□□□□ 0.58
TMCO3-208ENST00000491166 PTPRUQ92729 1446 aa18.68■□□□□ 0.58
TMCO3-208ENST00000491166 C14orf37Q86TY3 774 aa18.68■□□□□ 0.58
TMCO3-208ENST00000491166 SHPRHQ149N8 1683 aa18.68■□□□□ 0.58
TMCO3-208ENST00000491166 ZRANB1Q9UGI0 708 aa18.67■□□□□ 0.58
TMCO3-208ENST00000491166 DIP2AQ14689 1571 aa18.67■□□□□ 0.58
TMCO3-208ENST00000491166 AMOTL2Q9Y2J4 779 aa18.66■□□□□ 0.58
TMCO3-208ENST00000491166 NRXN3Q9Y4C0 1643 aa18.66■□□□□ 0.58
TMCO3-208ENST00000491166 NEXMIFQ5QGS0 1516 aa18.65■□□□□ 0.58
TMCO3-208ENST00000491166 METP08581 1390 aa18.63■□□□□ 0.57
TMCO3-208ENST00000491166 PIK3R4Q99570 1358 aa18.63■□□□□ 0.57
TMCO3-208ENST00000491166 MPHOSPH9Q99550 1183 aa18.62■□□□□ 0.57
TMCO3-208ENST00000491166 AHDC1Q5TGY3 1603 aaPredicted RBP18.62■□□□□ 0.57
TMCO3-208ENST00000491166 KIF1BO60333 1816 aa18.61■□□□□ 0.57
TMCO3-208ENST00000491166 QTRT2Q9H974 415 aaKnown RBP18.61■□□□□ 0.57
TMCO3-208ENST00000491166 RBM6P78332 1123 aaKnown RBP18.6■□□□□ 0.57
TMCO3-208ENST00000491166 C8orf37Q96NL8 207 aa18.59■□□□□ 0.57
TMCO3-208ENST00000491166 SETD5Q9C0A6 1442 aa18.57■□□□□ 0.56
TMCO3-208ENST00000491166 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
TMCO3-208ENST00000491166 RGL3Q3MIN7 710 aa18.57■□□□□ 0.56
TMCO3-208ENST00000491166 C19orf44Q9H6X5 657 aa18.57■□□□□ 0.56
TMCO3-208ENST00000491166 XRN1Q8IZH2 1706 aaKnown RBP18.57■□□□□ 0.56
TMCO3-208ENST00000491166 ATF3P18847 181 aa18.56■□□□□ 0.56
TMCO3-208ENST00000491166 CCDC144AA2RUR9 1427 aa18.56■□□□□ 0.56
TMCO3-208ENST00000491166 NCOA3Q9Y6Q9 1424 aa18.56■□□□□ 0.56
TMCO3-208ENST00000491166 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.55■□□□□ 0.56
TMCO3-208ENST00000491166 VGFO15240 615 aaPredicted RBP18.55■□□□□ 0.56
TMCO3-208ENST00000491166 CADPS2Q86UW7 1296 aa18.54■□□□□ 0.56
TMCO3-208ENST00000491166 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
TMCO3-208ENST00000491166 RPGRIP1LQ68CZ1 1315 aa18.52■□□□□ 0.56
TMCO3-208ENST00000491166 BRINP3Q76B58 766 aa18.52■□□□□ 0.56
TMCO3-208ENST00000491166 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
TMCO3-208ENST00000491166 PPLO60437 1756 aa18.5■□□□□ 0.55
TMCO3-208ENST00000491166 SPATA31E1Q6ZUB1 1445 aa18.49■□□□□ 0.55
TMCO3-208ENST00000491166 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
TMCO3-208ENST00000491166 ROBO2Q9HCK4 1378 aa18.48■□□□□ 0.55
TMCO3-208ENST00000491166 ADAMTS2O95450 1211 aa18.48■□□□□ 0.55
TMCO3-208ENST00000491166 EP400Q96L91 3159 aa18.47■□□□□ 0.55
TMCO3-208ENST00000491166 ADGRL3Q9HAR2 1447 aa18.47■□□□□ 0.55
TMCO3-208ENST00000491166 MST1RQ04912 1400 aa18.46■□□□□ 0.55
TMCO3-208ENST00000491166 DCCP43146 1447 aa18.45■□□□□ 0.54
TMCO3-208ENST00000491166 ASXL1Q8IXJ9 1541 aa18.44■□□□□ 0.54
TMCO3-208ENST00000491166 NALCNQ8IZF0 1738 aa18.44■□□□□ 0.54
TMCO3-208ENST00000491166 DDX17Q92841 729 aaKnown RBP18.44■□□□□ 0.54
TMCO3-208ENST00000491166 STK26Q9P289 416 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms