RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 UBR1Q8IWV7 1749 aa13.7□□□□□ -0.22
SKAP2-207ENST00000490456 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
SKAP2-207ENST00000490456 ZNF644Q9H582 1327 aaPredicted RBP13.69□□□□□ -0.22
SKAP2-207ENST00000490456 NCOA2Q15596 1464 aa13.69□□□□□ -0.22
SKAP2-207ENST00000490456 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
SKAP2-207ENST00000490456 SETD1AO15047 1707 aaKnown RBP13.69□□□□□ -0.22
SKAP2-207ENST00000490456 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
SKAP2-207ENST00000490456 CLCN6P51797 869 aa13.68□□□□□ -0.22
SKAP2-207ENST00000490456 POTEAQ6S8J7 498 aa13.68□□□□□ -0.22
SKAP2-207ENST00000490456 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
SKAP2-207ENST00000490456 RSPH4AQ5TD94 716 aa13.66□□□□□ -0.22
SKAP2-207ENST00000490456 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
SKAP2-207ENST00000490456 ERVK-7P63135 1459 aa13.66□□□□□ -0.22
SKAP2-207ENST00000490456 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
SKAP2-207ENST00000490456 ABCC3O15438 1527 aa13.65□□□□□ -0.22
SKAP2-207ENST00000490456 PPARGC1BQ86YN6 1023 aaKnown RBP13.65□□□□□ -0.22
SKAP2-207ENST00000490456 SLIT1O75093 1534 aa13.64□□□□□ -0.23
SKAP2-207ENST00000490456 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
SKAP2-207ENST00000490456 CAMSAP2Q08AD1 1489 aa13.64□□□□□ -0.23
SKAP2-207ENST00000490456 ARHGEF5Q12774 1597 aa13.63□□□□□ -0.23
SKAP2-207ENST00000490456 ARHGAP23Q9P227 1491 aa13.63□□□□□ -0.23
SKAP2-207ENST00000490456 CFAP65Q6ZU64 1925 aaKnown RBP13.63□□□□□ -0.23
SKAP2-207ENST00000490456 CEP152O94986 1710 aa13.62□□□□□ -0.23
SKAP2-207ENST00000490456 MYOM3Q5VTT5 1437 aa13.6□□□□□ -0.23
SKAP2-207ENST00000490456 PHLPP1O60346 1717 aa13.59□□□□□ -0.23
SKAP2-207ENST00000490456 MROH1Q8NDA8 1641 aa13.59□□□□□ -0.23
SKAP2-207ENST00000490456 MAST1Q9Y2H9 1570 aa13.58□□□□□ -0.23
SKAP2-207ENST00000490456 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
SKAP2-207ENST00000490456 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
SKAP2-207ENST00000490456 TXNDC2Q86VQ3 553 aa13.58□□□□□ -0.24
SKAP2-207ENST00000490456 KDM5AP29375 1690 aaKnown RBP13.58□□□□□ -0.24
SKAP2-207ENST00000490456 LTKP29376 864 aa13.57□□□□□ -0.24
SKAP2-207ENST00000490456 EID1Q9Y6B2 187 aa13.57□□□□□ -0.24
SKAP2-207ENST00000490456 TMEM94Q12767 1356 aa13.57□□□□□ -0.24
SKAP2-207ENST00000490456 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
SKAP2-207ENST00000490456 DCBLD2Q96PD2 775 aa13.55□□□□□ -0.24
SKAP2-207ENST00000490456 JCADQ9P266 1359 aa13.55□□□□□ -0.24
SKAP2-207ENST00000490456 ARHGAP31Q2M1Z3 1444 aa13.54□□□□□ -0.24
SKAP2-207ENST00000490456 FGD6Q6ZV73 1430 aa13.54□□□□□ -0.24
SKAP2-207ENST00000490456 NKTRP30414 1462 aaKnown RBP13.54□□□□□ -0.24
SKAP2-207ENST00000490456 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
SKAP2-207ENST00000490456 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
SKAP2-207ENST00000490456 KCNA6P17658 529 aa13.52□□□□□ -0.25
SKAP2-207ENST00000490456 UPF1Q92900 1129 aaKnown RBP eCLIP13.52□□□□□ -0.25
SKAP2-207ENST00000490456 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
SKAP2-207ENST00000490456 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
SKAP2-207ENST00000490456 COL16A1Q07092 1604 aaPredicted RBP13.51□□□□□ -0.25
SKAP2-207ENST00000490456 EFCAB6Q5THR3 1501 aa13.51□□□□□ -0.25
SKAP2-207ENST00000490456 MSH6P52701 1360 aa13.51□□□□□ -0.25
SKAP2-207ENST00000490456 TET3O43151 1660 aa13.5□□□□□ -0.25
SKAP2-207ENST00000490456 DUOX2Q9NRD8 1548 aa13.5□□□□□ -0.25
SKAP2-207ENST00000490456 FAM50AQ14320 339 aaKnown RBP13.5□□□□□ -0.25
SKAP2-207ENST00000490456 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
SKAP2-207ENST00000490456 ZNF772Q68DY9 489 aaPredicted RBP13.49□□□□□ -0.25
SKAP2-207ENST00000490456 SHPRHQ149N8 1683 aa13.49□□□□□ -0.25
SKAP2-207ENST00000490456 SPATA31A6Q5VVP1 1343 aa13.48□□□□□ -0.25
SKAP2-207ENST00000490456 SLAIN2Q9P270 581 aa13.47□□□□□ -0.25
SKAP2-207ENST00000490456 LRP6O75581 1613 aa13.46□□□□□ -0.25
SKAP2-207ENST00000490456 PTPN23Q9H3S7 1636 aa13.46□□□□□ -0.25
SKAP2-207ENST00000490456 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.25
SKAP2-207ENST00000490456 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.25
SKAP2-207ENST00000490456 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
SKAP2-207ENST00000490456 CDK12Q9NYV4 1490 aaPredicted RBP13.46□□□□□ -0.25
SKAP2-207ENST00000490456 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
SKAP2-207ENST00000490456 TRIM52Q96A61 297 aa13.45□□□□□ -0.26
SKAP2-207ENST00000490456 AHDC1Q5TGY3 1603 aaPredicted RBP13.44□□□□□ -0.26
SKAP2-207ENST00000490456 RBM33Q96EV2 1170 aaKnown RBP13.44□□□□□ -0.26
SKAP2-207ENST00000490456 SLC26A8Q96RN1 970 aa13.44□□□□□ -0.26
SKAP2-207ENST00000490456 ERBINQ96RT1 1412 aa13.44□□□□□ -0.26
SKAP2-207ENST00000490456 ADGRB3O60242 1522 aa13.44□□□□□ -0.26
SKAP2-207ENST00000490456 ABCC5O15440 1437 aa13.43□□□□□ -0.26
SKAP2-207ENST00000490456 DAPK1P53355 1430 aa13.43□□□□□ -0.26
SKAP2-207ENST00000490456 ZNF579Q8NAF0 562 aaKnown RBP13.43□□□□□ -0.26
SKAP2-207ENST00000490456 CROCC2H7BZ55 1655 aa13.43□□□□□ -0.26
SKAP2-207ENST00000490456 RXRBP28702 533 aa13.42□□□□□ -0.26
SKAP2-207ENST00000490456 KANK1Q14678 1352 aa13.42□□□□□ -0.26
SKAP2-207ENST00000490456 RRBP1Q9P2E9 1410 aaKnown RBP13.41□□□□□ -0.26
SKAP2-207ENST00000490456 NCOA3Q9Y6Q9 1424 aa13.41□□□□□ -0.26
SKAP2-207ENST00000490456 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
SKAP2-207ENST00000490456 CHIC2Q9UKJ5 165 aa13.41□□□□□ -0.26
SKAP2-207ENST00000490456 LMTK2Q8IWU2 1503 aa13.4□□□□□ -0.26
SKAP2-207ENST00000490456 ITGAEP38570 1179 aa13.4□□□□□ -0.26
SKAP2-207ENST00000490456 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
SKAP2-207ENST00000490456 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.39□□□□□ -0.27
SKAP2-207ENST00000490456 IDI1Q13907 227 aa13.39□□□□□ -0.27
SKAP2-207ENST00000490456 BCANQ96GW7 911 aa13.38□□□□□ -0.27
SKAP2-207ENST00000490456 MYO5BQ9ULV0 1848 aa13.38□□□□□ -0.27
SKAP2-207ENST00000490456 DIP2AQ14689 1571 aa13.37□□□□□ -0.27
SKAP2-207ENST00000490456 RRP7BPQ9NSQ0 103 aa13.37□□□□□ -0.27
SKAP2-207ENST00000490456 NOS1P29475 1434 aa13.37□□□□□ -0.27
SKAP2-207ENST00000490456 SRCAPQ6ZRS2 3230 aa13.37□□□□□ -0.27
SKAP2-207ENST00000490456 PLEKHG1Q9ULL1 1385 aa13.36□□□□□ -0.27
SKAP2-207ENST00000490456 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
SKAP2-207ENST00000490456 ANKRD30AQ9BXX3 1397 aa13.35□□□□□ -0.27
SKAP2-207ENST00000490456 GCC2Q8IWJ2 1684 aa13.35□□□□□ -0.27
SKAP2-207ENST00000490456 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
SKAP2-207ENST00000490456 ZFYVE9O95405 1425 aa13.34□□□□□ -0.27
SKAP2-207ENST00000490456 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
SKAP2-207ENST00000490456 SLC52A1Q9NWF4 448 aa13.34□□□□□ -0.27
SKAP2-207ENST00000490456 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms