RNA–Protein interactions for RNA: ENST00000490435.5

ITGA4-211, Transcript of integrin subunit alpha 4, humanhuman

TSL 5

Gene ITGA4, Length 720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-211ENST00000490435 TMEM134Q9H6X4 195 aa12.62□□□□□ -0.39
ITGA4-211ENST00000490435 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
ITGA4-211ENST00000490435 FCHSD2O94868 740 aa12.6□□□□□ -0.39
ITGA4-211ENST00000490435 NRG2O14511 850 aaPredicted RBP12.59□□□□□ -0.39
ITGA4-211ENST00000490435 RCCD1A6NED2 376 aa12.58□□□□□ -0.4
ITGA4-211ENST00000490435 SEMA3EO15041 775 aa12.57□□□□□ -0.4
ITGA4-211ENST00000490435 BLOC1S3Q6QNY0 202 aa12.57□□□□□ -0.4
ITGA4-211ENST00000490435 FAM161AQ3B820 660 aa12.56□□□□□ -0.4
ITGA4-211ENST00000490435 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
ITGA4-211ENST00000490435 TRAF7Q6Q0C0 670 aa12.56□□□□□ -0.4
ITGA4-211ENST00000490435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
ITGA4-211ENST00000490435 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
ITGA4-211ENST00000490435 OATP04181 439 aa12.52□□□□□ -0.41
ITGA4-211ENST00000490435 CFHP08603 1231 aa12.52□□□□□ -0.41
ITGA4-211ENST00000490435 PDZRN3Q9UPQ7 1066 aa12.52□□□□□ -0.41
ITGA4-211ENST00000490435 LCE2BO14633 110 aa12.51□□□□□ -0.41
ITGA4-211ENST00000490435 RNF223E7ERA6 249 aa12.49□□□□□ -0.41
ITGA4-211ENST00000490435 TLL1O43897 1013 aa12.48□□□□□ -0.41
ITGA4-211ENST00000490435 HIC1Q14526 733 aa12.48□□□□□ -0.41
ITGA4-211ENST00000490435 PXYLP1Q8TE99 480 aa12.48□□□□□ -0.41
ITGA4-211ENST00000490435 SLC10A3P09131 477 aa12.47□□□□□ -0.41
ITGA4-211ENST00000490435 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
ITGA4-211ENST00000490435 NR1I2O75469 434 aa12.46□□□□□ -0.41
ITGA4-211ENST00000490435 SLC19A1P41440 591 aa12.46□□□□□ -0.41
ITGA4-211ENST00000490435 RSPH4AQ5TD94 716 aa12.46□□□□□ -0.41
ITGA4-211ENST00000490435 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
ITGA4-211ENST00000490435 ANKLE1Q8NAG6 615 aa12.44□□□□□ -0.42
ITGA4-211ENST00000490435 RBM26Q5T8P6 1007 aaKnown RBP12.43□□□□□ -0.42
ITGA4-211ENST00000490435 METTL3Q86U44 580 aaKnown RBP12.43□□□□□ -0.42
ITGA4-211ENST00000490435 S1PR4O95977 384 aa12.42□□□□□ -0.42
ITGA4-211ENST00000490435 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
ITGA4-211ENST00000490435 ADH1BP00325 375 aa12.41□□□□□ -0.42
ITGA4-211ENST00000490435 GNPATO15228 680 aa12.39□□□□□ -0.43
ITGA4-211ENST00000490435 SPRYD7Q5W111 196 aa12.39□□□□□ -0.43
ITGA4-211ENST00000490435 EMID1Q96A84 441 aaPredicted RBP12.39□□□□□ -0.43
ITGA4-211ENST00000490435 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
ITGA4-211ENST00000490435 SCUBE3Q8IX30 993 aa12.38□□□□□ -0.43
ITGA4-211ENST00000490435 TRIM67Q6ZTA4 783 aa12.37□□□□□ -0.43
ITGA4-211ENST00000490435 ZNF598Q86UK7 904 aaKnown RBP12.37□□□□□ -0.43
ITGA4-211ENST00000490435 SLC6A16Q9GZN6 736 aa12.37□□□□□ -0.43
ITGA4-211ENST00000490435 FECHP22830 423 aa12.35□□□□□ -0.43
ITGA4-211ENST00000490435 DAXXQ9UER7 740 aaPredicted RBP12.35□□□□□ -0.43
ITGA4-211ENST00000490435 PUS10Q3MIT2 529 aaKnown RBP12.34□□□□□ -0.43
ITGA4-211ENST00000490435 LIAT1Q6ZQX7 453 aa12.34□□□□□ -0.43
ITGA4-211ENST00000490435 GPR37O15354 613 aa12.33□□□□□ -0.44
ITGA4-211ENST00000490435 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
ITGA4-211ENST00000490435 PRR20EP86478 221 aa12.32□□□□□ -0.44
ITGA4-211ENST00000490435 PRR20CP86479 221 aa12.32□□□□□ -0.44
ITGA4-211ENST00000490435 PRR20DP86480 221 aa12.32□□□□□ -0.44
ITGA4-211ENST00000490435 PRR20BP86481 221 aa12.32□□□□□ -0.44
ITGA4-211ENST00000490435 PRR20AP86496 221 aa12.32□□□□□ -0.44
ITGA4-211ENST00000490435 ZNF697Q5TEC3 545 aa12.32□□□□□ -0.44
ITGA4-211ENST00000490435 SPSB2Q99619 263 aa12.32□□□□□ -0.44
ITGA4-211ENST00000490435 ZNF787Q6DD87 383 aa12.31□□□□□ -0.44
ITGA4-211ENST00000490435 PKDCCQ504Y2 493 aa12.3□□□□□ -0.44
ITGA4-211ENST00000490435 DDX11L8A8MPP1 907 aa12.29□□□□□ -0.44
ITGA4-211ENST00000490435 DGAT1O75907 488 aa12.28□□□□□ -0.44
ITGA4-211ENST00000490435 SULF1Q8IWU6 871 aa12.28□□□□□ -0.44
ITGA4-211ENST00000490435 ATP6V1AP38606 617 aa12.26□□□□□ -0.45
ITGA4-211ENST00000490435 FUT2Q10981 343 aa12.26□□□□□ -0.45
ITGA4-211ENST00000490435 PLA2G2CQ5R387 149 aa12.26□□□□□ -0.45
ITGA4-211ENST00000490435 MORN1Q5T089 497 aa12.26□□□□□ -0.45
ITGA4-211ENST00000490435 GDF9O60383 454 aa12.25□□□□□ -0.45
ITGA4-211ENST00000490435 GPIHBP1Q8IV16 184 aa12.25□□□□□ -0.45
ITGA4-211ENST00000490435 NLRP7Q8WX94 980 aa12.25□□□□□ -0.45
ITGA4-211ENST00000490435 TNFRSF10AO00220 468 aa12.24□□□□□ -0.45
ITGA4-211ENST00000490435 GCGRP47871 477 aa12.24□□□□□ -0.45
ITGA4-211ENST00000490435 HAP1P54257 671 aaPredicted RBP12.23□□□□□ -0.45
ITGA4-211ENST00000490435 MYT1Q01538 1121 aa12.23□□□□□ -0.45
ITGA4-211ENST00000490435 FMNL1O95466 1100 aaPredicted RBP12.22□□□□□ -0.45
ITGA4-211ENST00000490435 THAP11Q96EK4 314 aa12.22□□□□□ -0.45
ITGA4-211ENST00000490435 PHOX2BQ99453 314 aa12.22□□□□□ -0.45
ITGA4-211ENST00000490435 FAM187AA6NFU0 413 aa12.21□□□□□ -0.45
ITGA4-211ENST00000490435 SLC27A5Q9Y2P5 690 aa12.21□□□□□ -0.45
ITGA4-211ENST00000490435 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
ITGA4-211ENST00000490435 RPIAP49247 311 aa12.19□□□□□ -0.46
ITGA4-211ENST00000490435 SALL2Q9Y467 1007 aaPredicted RBP12.19□□□□□ -0.46
ITGA4-211ENST00000490435 GRIPAP1Q4V328 841 aa12.18□□□□□ -0.46
ITGA4-211ENST00000490435 FCF1Q9Y324 198 aaKnown RBP12.18□□□□□ -0.46
ITGA4-211ENST00000490435 CD2BP2O95400 341 aaKnown RBP12.17□□□□□ -0.46
ITGA4-211ENST00000490435 FOXC1Q12948 553 aa12.17□□□□□ -0.46
ITGA4-211ENST00000490435 FAM160A2Q8N612 972 aaPredicted RBP12.17□□□□□ -0.46
ITGA4-211ENST00000490435 BRICD5Q6PL45 260 aa12.16□□□□□ -0.46
ITGA4-211ENST00000490435 PKD2L1Q9P0L9 805 aa12.16□□□□□ -0.46
ITGA4-211ENST00000490435 KDM2AQ9Y2K7 1162 aa12.15□□□□□ -0.46
ITGA4-211ENST00000490435 ZNF775Q96BV0 537 aaPredicted RBP12.14□□□□□ -0.47
ITGA4-211ENST00000490435 TULP1O00294 542 aaPredicted RBP12.13□□□□□ -0.47
ITGA4-211ENST00000490435 MSS51Q4VC12 460 aa12.12□□□□□ -0.47
ITGA4-211ENST00000490435 MAP2K5Q13163 448 aa12.11□□□□□ -0.47
ITGA4-211ENST00000490435 Q3C1V9 767 aa12.11□□□□□ -0.47
ITGA4-211ENST00000490435 RNF19BQ6ZMZ0 732 aa12.11□□□□□ -0.47
ITGA4-211ENST00000490435 PRDM9Q9NQV7 894 aa12.11□□□□□ -0.47
ITGA4-211ENST00000490435 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
ITGA4-211ENST00000490435 CD46P15529 392 aa12.09□□□□□ -0.47
ITGA4-211ENST00000490435 POTECB2RU33 542 aa12.08□□□□□ -0.48
ITGA4-211ENST00000490435 AAASQ9NRG9 546 aa12.08□□□□□ -0.48
ITGA4-211ENST00000490435 IRF6O14896 467 aa12.07□□□□□ -0.48
ITGA4-211ENST00000490435 ST8SIA5O15466 376 aa12.07□□□□□ -0.48
ITGA4-211ENST00000490435 CYP4X1Q8N118 509 aa12.07□□□□□ -0.48
ITGA4-211ENST00000490435 TOR4AQ9NXH8 423 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms