RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 FAM177A1Q8N128 213 aaPredicted RBP4.06□□□□□ -1.76
EPB41-212ENST00000490308 OXER1Q8TDS5 423 aa4.06□□□□□ -1.76
EPB41-212ENST00000490308 MARVELD3Q96A59 401 aa4.06□□□□□ -1.76
EPB41-212ENST00000490308 DRC1Q96MC2 740 aa4.06□□□□□ -1.76
EPB41-212ENST00000490308 TMEM121BQ9BXQ6 578 aaPredicted RBP4.06□□□□□ -1.76
EPB41-212ENST00000490308 EMILIN3Q9NT22 766 aa4.06□□□□□ -1.76
EPB41-212ENST00000490308 GNEQ9Y223 722 aaKnown RBP4.06□□□□□ -1.76
EPB41-212ENST00000490308 PPM1GO15355 546 aaPredicted RBP4.05□□□□□ -1.76
EPB41-212ENST00000490308 OSBPP22059 807 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 SOX11P35716 441 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 ITGAEP38570 1179 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 PTGDRQ13258 359 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 SF3A1Q15459 793 aaKnown RBP4.05□□□□□ -1.76
EPB41-212ENST00000490308 TUSC1Q2TAM9 212 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 PPP2R2DQ66LE6 453 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 TMEM92Q6UXU6 159 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 PLPP6Q8IY26 295 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 UPF1Q92900 1129 aaKnown RBP eCLIP4.05□□□□□ -1.76
EPB41-212ENST00000490308 SIRT1Q96EB6 747 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 L3MBTL3Q96JM7 780 aaPredicted RBP4.05□□□□□ -1.76
EPB41-212ENST00000490308 GDPD2Q9HCC8 539 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 POLR3EQ9NVU0 708 aa4.05□□□□□ -1.76
EPB41-212ENST00000490308 ABL2P42684 1182 aa4.04□□□□□ -1.76
EPB41-212ENST00000490308 MDM2Q00987 491 aaPredicted RBP4.04□□□□□ -1.76
EPB41-212ENST00000490308 ZNF326Q5BKZ1 582 aaKnown RBP4.04□□□□□ -1.76
EPB41-212ENST00000490308 C3orf67Q6ZVT6 689 aa4.04□□□□□ -1.76
EPB41-212ENST00000490308 C8orf37Q96NL8 207 aa4.04□□□□□ -1.76
EPB41-212ENST00000490308 TMUB1Q9BVT8 246 aa4.04□□□□□ -1.76
EPB41-212ENST00000490308 KIF3CO14782 793 aa4.03□□□□□ -1.76
EPB41-212ENST00000490308 MYSM1Q5VVJ2 828 aa4.03□□□□□ -1.76
EPB41-212ENST00000490308 ANKRD13AQ8IZ07 590 aa4.03□□□□□ -1.76
EPB41-212ENST00000490308 PNMA1Q8ND90 353 aa4.03□□□□□ -1.76
EPB41-212ENST00000490308 SREK1Q8WXA9 508 aaKnown RBP4.03□□□□□ -1.76
EPB41-212ENST00000490308 POLR3GLQ9BT43 218 aa4.03□□□□□ -1.76
EPB41-212ENST00000490308 NDUFB9Q9Y6M9 179 aa4.03□□□□□ -1.76
EPB41-212ENST00000490308 ATG7O95352 703 aa4.02□□□□□ -1.77
EPB41-212ENST00000490308 GJA5P36382 358 aa4.02□□□□□ -1.77
EPB41-212ENST00000490308 PROCA1Q8NCQ7 364 aaPredicted RBP4.02□□□□□ -1.77
EPB41-212ENST00000490308 CERKQ8TCT0 537 aa4.02□□□□□ -1.77
EPB41-212ENST00000490308 UBXN4Q92575 508 aa4.02□□□□□ -1.77
EPB41-212ENST00000490308 KRTAP3-3Q9BYR6 98 aa4.02□□□□□ -1.77
EPB41-212ENST00000490308 KRTAP3-2Q9BYR7 98 aa4.02□□□□□ -1.77
EPB41-212ENST00000490308 SNRKQ9NRH2 765 aa4.02□□□□□ -1.77
EPB41-212ENST00000490308 FAM217BQ9NTX9 383 aaPredicted RBP4.02□□□□□ -1.77
EPB41-212ENST00000490308 TCF3P15923 654 aa4.01□□□□□ -1.77
EPB41-212ENST00000490308 HDGFL1Q5TGJ6 251 aa4.01□□□□□ -1.77
EPB41-212ENST00000490308 MRRFQ96E11 262 aaKnown RBP4.01□□□□□ -1.77
EPB41-212ENST00000490308 EPAS1Q99814 870 aa4.01□□□□□ -1.77
EPB41-212ENST00000490308 PPP1R12CQ9BZL4 782 aa4.01□□□□□ -1.77
EPB41-212ENST00000490308 IGSF5Q9NSI5 407 aa4.01□□□□□ -1.77
EPB41-212ENST00000490308 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.01□□□□□ -1.77
EPB41-212ENST00000490308 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4□□□□□ -1.77
EPB41-212ENST00000490308 RFX1P22670 979 aa4□□□□□ -1.77
EPB41-212ENST00000490308 FECHP22830 423 aa4□□□□□ -1.77
EPB41-212ENST00000490308 VAMP1P23763 118 aa4□□□□□ -1.77
EPB41-212ENST00000490308 ARID4AP29374 1257 aaPredicted RBP4□□□□□ -1.77
EPB41-212ENST00000490308 ZC3H6P61129 1189 aaKnown RBP4□□□□□ -1.77
EPB41-212ENST00000490308 MTMR14Q8NCE2 650 aa4□□□□□ -1.77
EPB41-212ENST00000490308 SPATA32Q96LK8 384 aa4□□□□□ -1.77
EPB41-212ENST00000490308 CHMP4AQ9BY43 222 aa4□□□□□ -1.77
EPB41-212ENST00000490308 TBC1D2Q9BYX2 928 aa4□□□□□ -1.77
EPB41-212ENST00000490308 SNPHO15079 494 aa3.99□□□□□ -1.77
EPB41-212ENST00000490308 RIC3Q7Z5B4 369 aa3.99□□□□□ -1.77
EPB41-212ENST00000490308 SULF1Q8IWU6 871 aa3.99□□□□□ -1.77
EPB41-212ENST00000490308 REPIN1Q9BWE0 567 aaKnown RBP3.99□□□□□ -1.77
EPB41-212ENST00000490308 BCL2L13Q9BXK5 485 aa3.99□□□□□ -1.77
EPB41-212ENST00000490308 LMOD1P29536 600 aaPredicted RBP3.98□□□□□ -1.77
EPB41-212ENST00000490308 ELOAQ14241 798 aaKnown RBP3.98□□□□□ -1.77
EPB41-212ENST00000490308 CFAP70Q5T0N1 1121 aa3.98□□□□□ -1.77
EPB41-212ENST00000490308 NUTM1Q86Y26 1132 aa3.98□□□□□ -1.77
EPB41-212ENST00000490308 ZNF592Q92610 1267 aa3.98□□□□□ -1.77
EPB41-212ENST00000490308 DDX12PQ92771 950 aa3.98□□□□□ -1.77
EPB41-212ENST00000490308 HS3ST6Q96QI5 342 aa3.98□□□□□ -1.77
EPB41-212ENST00000490308 PALM3A6NDB9 673 aaPredicted RBP3.97□□□□□ -1.77
EPB41-212ENST00000490308 FAM205CA6NFA0 338 aa3.97□□□□□ -1.77
EPB41-212ENST00000490308 EVI5O60447 810 aa3.97□□□□□ -1.77
EPB41-212ENST00000490308 AP1G2O75843 785 aa3.97□□□□□ -1.77
EPB41-212ENST00000490308 SRPK2P78362 688 aaKnown RBP3.97□□□□□ -1.77
EPB41-212ENST00000490308 FGD1P98174 961 aa3.97□□□□□ -1.77
EPB41-212ENST00000490308 SEMA3FQ13275 785 aa3.97□□□□□ -1.77
EPB41-212ENST00000490308 PRPF38BQ5VTL8 546 aaKnown RBP3.97□□□□□ -1.77
EPB41-212ENST00000490308 ZNF710Q8N1W2 664 aa3.97□□□□□ -1.77
EPB41-212ENST00000490308 TBC1D2BQ9UPU7 963 aa3.97□□□□□ -1.77
EPB41-212ENST00000490308 ARID4BQ4LE39 1312 aaPredicted RBP3.96□□□□□ -1.77
EPB41-212ENST00000490308 NUTM2BA6NNL0 878 aaPredicted RBP3.96□□□□□ -1.78
EPB41-212ENST00000490308 POM121CA8CG34 1229 aa3.96□□□□□ -1.78
EPB41-212ENST00000490308 NUTM2EB1AL46 878 aaPredicted RBP3.96□□□□□ -1.78
EPB41-212ENST00000490308 SPTLC1O15269 473 aa3.96□□□□□ -1.78
EPB41-212ENST00000490308 MAP3K7O43318 606 aa3.96□□□□□ -1.78
EPB41-212ENST00000490308 PHF14O94880 888 aa3.96□□□□□ -1.78
EPB41-212ENST00000490308 BRD2P25440 801 aaKnown RBP3.96□□□□□ -1.78
EPB41-212ENST00000490308 EMP3P54852 163 aa3.96□□□□□ -1.78
EPB41-212ENST00000490308 NUTM2DQ5VT03 806 aaPredicted RBP3.96□□□□□ -1.78
EPB41-212ENST00000490308 METTL3Q86U44 580 aaKnown RBP3.96□□□□□ -1.78
EPB41-212ENST00000490308 NUTM2AQ8IVF1 878 aaPredicted RBP3.96□□□□□ -1.78
EPB41-212ENST00000490308 RBM46Q8TBY0 533 aaKnown RBP3.96□□□□□ -1.78
EPB41-212ENST00000490308 RBM27Q9P2N5 1060 aaKnown RBP3.96□□□□□ -1.78
EPB41-212ENST00000490308 UNCXA6NJT0 531 aa3.95□□□□□ -1.78
EPB41-212ENST00000490308 TMEM88BA6NKF7 163 aa3.95□□□□□ -1.78
EPB41-212ENST00000490308 USP17L8P0C7I0 530 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms