RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 FAM135AQ9P2D6 1515 aa6.87□□□□□ -1.31
RTN1-207ENST00000490111 RNF25Q96BH1 459 aaPredicted RBP6.87□□□□□ -1.31
RTN1-207ENST00000490111 CIZ1Q9ULV3 898 aaPredicted RBP6.87□□□□□ -1.31
RTN1-207ENST00000490111 KIF14Q15058 1648 aa6.87□□□□□ -1.31
RTN1-207ENST00000490111 LRRC9Q6ZRR7 1453 aa6.86□□□□□ -1.31
RTN1-207ENST00000490111 RGS12O14924 1447 aa6.86□□□□□ -1.31
RTN1-207ENST00000490111 CDK11AQ9UQ88 783 aaPredicted RBP6.86□□□□□ -1.31
RTN1-207ENST00000490111 U3KPZ7 1027 aaPredicted RBP6.86□□□□□ -1.31
RTN1-207ENST00000490111 CDC42BPBQ9Y5S2 1711 aa6.86□□□□□ -1.31
RTN1-207ENST00000490111 ZC3H13Q5T200 1668 aaKnown RBP6.86□□□□□ -1.31
RTN1-207ENST00000490111 ATAD2Q6PL18 1390 aa6.85□□□□□ -1.31
RTN1-207ENST00000490111 RBM6P78332 1123 aaKnown RBP6.85□□□□□ -1.31
RTN1-207ENST00000490111 PLXNC1O60486 1568 aa6.85□□□□□ -1.31
RTN1-207ENST00000490111 SAMD9LQ8IVG5 1584 aa6.85□□□□□ -1.31
RTN1-207ENST00000490111 A2MP01023 1474 aa6.85□□□□□ -1.31
RTN1-207ENST00000490111 NLRP1Q9C000 1473 aa6.85□□□□□ -1.31
RTN1-207ENST00000490111 TMEM94Q12767 1356 aa6.84□□□□□ -1.31
RTN1-207ENST00000490111 LRP5O75197 1615 aa6.84□□□□□ -1.31
RTN1-207ENST00000490111 SPAG9O60271 1321 aaKnown RBP6.84□□□□□ -1.31
RTN1-207ENST00000490111 APBB1O00213 710 aa6.84□□□□□ -1.31
RTN1-207ENST00000490111 MSH5O43196 834 aa6.84□□□□□ -1.31
RTN1-207ENST00000490111 KCTD17Q8N5Z5 321 aa6.84□□□□□ -1.31
RTN1-207ENST00000490111 SLAIN2Q9P270 581 aa6.84□□□□□ -1.31
RTN1-207ENST00000490111 SRCAPQ6ZRS2 3230 aa6.84□□□□□ -1.31
RTN1-207ENST00000490111 FGD6Q6ZV73 1430 aa6.84□□□□□ -1.32
RTN1-207ENST00000490111 MIA2Q96PC5 1412 aa6.84□□□□□ -1.32
RTN1-207ENST00000490111 COL16A1Q07092 1604 aaPredicted RBP6.83□□□□□ -1.32
RTN1-207ENST00000490111 AFF2P51816 1311 aa6.83□□□□□ -1.32
RTN1-207ENST00000490111 ATP7AQ04656 1500 aa6.83□□□□□ -1.32
RTN1-207ENST00000490111 YY1P25490 414 aa6.83□□□□□ -1.32
RTN1-207ENST00000490111 CCDC125Q86Z20 511 aa6.83□□□□□ -1.32
RTN1-207ENST00000490111 PLCD3Q8N3E9 789 aa6.83□□□□□ -1.32
RTN1-207ENST00000490111 QTRT2Q9H974 415 aaKnown RBP6.83□□□□□ -1.32
RTN1-207ENST00000490111 PZPP20742 1482 aa6.83□□□□□ -1.32
RTN1-207ENST00000490111 HMGB1P09429 215 aaKnown RBP6.82□□□□□ -1.32
RTN1-207ENST00000490111 RGS22Q8NE09 1264 aa6.82□□□□□ -1.32
RTN1-207ENST00000490111 ATP1B4Q9UN42 357 aaPredicted RBP6.82□□□□□ -1.32
RTN1-207ENST00000490111 PREX2Q70Z35 1606 aa6.82□□□□□ -1.32
RTN1-207ENST00000490111 CLIP1P30622 1438 aa6.82□□□□□ -1.32
RTN1-207ENST00000490111 TROQ12816 1431 aaPredicted RBP6.82□□□□□ -1.32
RTN1-207ENST00000490111 SHPRHQ149N8 1683 aa6.81□□□□□ -1.32
RTN1-207ENST00000490111 CDK11BP21127 795 aaKnown RBP6.81□□□□□ -1.32
RTN1-207ENST00000490111 PROSER2Q86WR7 435 aaPredicted RBP6.81□□□□□ -1.32
RTN1-207ENST00000490111 NGLY1Q96IV0 654 aa6.81□□□□□ -1.32
RTN1-207ENST00000490111 STAG3Q9UJ98 1225 aa6.81□□□□□ -1.32
RTN1-207ENST00000490111 RAD21O60216 631 aa6.8□□□□□ -1.32
RTN1-207ENST00000490111 HSP90B1P14625 803 aaKnown RBP6.8□□□□□ -1.32
RTN1-207ENST00000490111 MAP3K1Q13233 1512 aa6.8□□□□□ -1.32
RTN1-207ENST00000490111 SCAF11Q99590 1463 aaKnown RBP6.79□□□□□ -1.32
RTN1-207ENST00000490111 ZMYND10O75800 440 aa6.79□□□□□ -1.32
RTN1-207ENST00000490111 KCNA6P17658 529 aa6.79□□□□□ -1.32
RTN1-207ENST00000490111 HNRNPMP52272 730 aaKnown RBP eCLIP6.79□□□□□ -1.32
RTN1-207ENST00000490111 TXNDC2Q86VQ3 553 aa6.79□□□□□ -1.32
RTN1-207ENST00000490111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.79□□□□□ -1.32
RTN1-207ENST00000490111 TRAIPQ9BWF2 469 aa6.79□□□□□ -1.32
RTN1-207ENST00000490111 ZNF777Q9ULD5 760 aaPredicted RBP6.79□□□□□ -1.32
RTN1-207ENST00000490111 MSH6P52701 1360 aa6.79□□□□□ -1.32
RTN1-207ENST00000490111 WASHC2CQ9Y4E1 1318 aa6.78□□□□□ -1.32
RTN1-207ENST00000490111 INO80Q9ULG1 1556 aaPredicted RBP6.78□□□□□ -1.32
RTN1-207ENST00000490111 ADGBQ8N7X0 1667 aa6.78□□□□□ -1.32
RTN1-207ENST00000490111 LTKP29376 864 aa6.78□□□□□ -1.32
RTN1-207ENST00000490111 MKRN3Q13064 507 aaKnown RBP6.78□□□□□ -1.32
RTN1-207ENST00000490111 C8orf37Q96NL8 207 aa6.77□□□□□ -1.33
RTN1-207ENST00000490111 PRDM15P57071 1507 aaPredicted RBP6.76□□□□□ -1.33
RTN1-207ENST00000490111 SYCP2Q9BX26 1530 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 SENP3-EIF4A1A0A087X0R7 540 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 CCDC82Q8N4S0 544 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 IL27Q8NEV9 243 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 PUS7Q96PZ0 661 aaKnown RBP6.76□□□□□ -1.33
RTN1-207ENST00000490111 GPBP1L1Q9HC44 474 aaPredicted RBP6.76□□□□□ -1.33
RTN1-207ENST00000490111 EID1Q9Y6B2 187 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 TIAM1Q13009 1591 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 NWD1Q149M9 1564 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 CDC42BPAQ5VT25 1732 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 NHSL1Q5SYE7 1610 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 AHDC1Q5TGY3 1603 aaPredicted RBP6.76□□□□□ -1.33
RTN1-207ENST00000490111 ABCC3O15438 1527 aa6.76□□□□□ -1.33
RTN1-207ENST00000490111 KIF3BO15066 747 aa6.75□□□□□ -1.33
RTN1-207ENST00000490111 MTMR7Q9Y216 660 aa6.75□□□□□ -1.33
RTN1-207ENST00000490111 UBR1Q8IWV7 1749 aa6.75□□□□□ -1.33
RTN1-207ENST00000490111 DIP2AQ14689 1571 aa6.74□□□□□ -1.33
RTN1-207ENST00000490111 ARHGAP23Q9P227 1491 aa6.74□□□□□ -1.33
RTN1-207ENST00000490111 DHX29Q7Z478 1369 aaKnown RBP6.74□□□□□ -1.33
RTN1-207ENST00000490111 TESPA1A2RU30 521 aaPredicted RBP6.74□□□□□ -1.33
RTN1-207ENST00000490111 RIOK3O14730 519 aaKnown RBP6.74□□□□□ -1.33
RTN1-207ENST00000490111 RYDENQ9NUL5 291 aaKnown RBP6.74□□□□□ -1.33
RTN1-207ENST00000490111 WDR70Q9NW82 654 aa6.74□□□□□ -1.33
RTN1-207ENST00000490111 SLIT1O75093 1534 aa6.74□□□□□ -1.33
RTN1-207ENST00000490111 KIAA1107Q9UPP5 1409 aa6.74□□□□□ -1.33
RTN1-207ENST00000490111 NCOA2Q15596 1464 aa6.73□□□□□ -1.33
RTN1-207ENST00000490111 PSDA5PKW4 1024 aaPredicted RBP6.73□□□□□ -1.33
RTN1-207ENST00000490111 DEFB132Q7Z7B7 95 aa6.73□□□□□ -1.33
RTN1-207ENST00000490111 FMN1Q68DA7 1419 aa6.73□□□□□ -1.33
RTN1-207ENST00000490111 NKTRP30414 1462 aaKnown RBP6.73□□□□□ -1.33
RTN1-207ENST00000490111 KDM5AP29375 1690 aaKnown RBP6.72□□□□□ -1.33
RTN1-207ENST00000490111 STK25O00506 426 aa6.72□□□□□ -1.33
RTN1-207ENST00000490111 BARGINQ6ZT62 677 aa6.72□□□□□ -1.33
RTN1-207ENST00000490111 CADPS2Q86UW7 1296 aa6.72□□□□□ -1.33
RTN1-207ENST00000490111 MIER1Q8N108 512 aa6.72□□□□□ -1.33
RTN1-207ENST00000490111 SLC26A8Q96RN1 970 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms