RNA–Protein interactions for RNA: ENST00000489876.1

HUWE1-213, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene HUWE1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-213ENST00000489876 MLECQ14165 292 aa13.02□□□□□ -0.33
HUWE1-213ENST00000489876 MARVELD3Q96A59 401 aa13.02□□□□□ -0.33
HUWE1-213ENST00000489876 HNRNPMP52272 730 aaKnown RBP eCLIP13.01□□□□□ -0.33
HUWE1-213ENST00000489876 KANK4Q5T7N3 995 aaPredicted RBP13.01□□□□□ -0.33
HUWE1-213ENST00000489876 PTPRMP28827 1452 aa13.01□□□□□ -0.33
HUWE1-213ENST00000489876 FER1L4A9Z1Z3 1794 aa13□□□□□ -0.33
HUWE1-213ENST00000489876 ZNF518AQ6AHZ1 1483 aa13□□□□□ -0.33
HUWE1-213ENST00000489876 ATP10AO60312 1499 aa12.99□□□□□ -0.33
HUWE1-213ENST00000489876 MAGI2Q86UL8 1455 aa12.99□□□□□ -0.33
HUWE1-213ENST00000489876 CCNB3Q8WWL7 1395 aa12.99□□□□□ -0.33
HUWE1-213ENST00000489876 SOX12O15370 315 aa12.99□□□□□ -0.33
HUWE1-213ENST00000489876 TMEM92Q6UXU6 159 aa12.99□□□□□ -0.33
HUWE1-213ENST00000489876 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
HUWE1-213ENST00000489876 NCOA2Q15596 1464 aa12.98□□□□□ -0.33
HUWE1-213ENST00000489876 SNPHO15079 494 aa12.98□□□□□ -0.33
HUWE1-213ENST00000489876 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
HUWE1-213ENST00000489876 PCDH10Q9P2E7 1040 aa12.98□□□□□ -0.33
HUWE1-213ENST00000489876 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
HUWE1-213ENST00000489876 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
HUWE1-213ENST00000489876 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
HUWE1-213ENST00000489876 G3V3G9 751 aa12.96□□□□□ -0.33
HUWE1-213ENST00000489876 FBXO22Q8NEZ5 403 aa12.96□□□□□ -0.33
HUWE1-213ENST00000489876 CFDP1Q9UEE9 299 aaPredicted RBP12.96□□□□□ -0.33
HUWE1-213ENST00000489876 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.34
HUWE1-213ENST00000489876 MLH3Q9UHC1 1453 aa12.96□□□□□ -0.34
HUWE1-213ENST00000489876 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
HUWE1-213ENST00000489876 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
HUWE1-213ENST00000489876 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
HUWE1-213ENST00000489876 STK25O00506 426 aa12.94□□□□□ -0.34
HUWE1-213ENST00000489876 MFRPQ9BY79 579 aa12.94□□□□□ -0.34
HUWE1-213ENST00000489876 MBD5Q9P267 1494 aa12.93□□□□□ -0.34
HUWE1-213ENST00000489876 ATP7AQ04656 1500 aa12.93□□□□□ -0.34
HUWE1-213ENST00000489876 CEBPAP49715 358 aaPredicted RBP12.92□□□□□ -0.34
HUWE1-213ENST00000489876 ADGBQ8N7X0 1667 aa12.92□□□□□ -0.34
HUWE1-213ENST00000489876 CAMSAP2Q08AD1 1489 aa12.91□□□□□ -0.34
HUWE1-213ENST00000489876 REREQ9P2R6 1566 aa12.91□□□□□ -0.34
HUWE1-213ENST00000489876 KIAA1107Q9UPP5 1409 aa12.9□□□□□ -0.34
HUWE1-213ENST00000489876 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
HUWE1-213ENST00000489876 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
HUWE1-213ENST00000489876 C3P01024 1663 aa12.89□□□□□ -0.35
HUWE1-213ENST00000489876 SPAG9O60271 1321 aaKnown RBP12.89□□□□□ -0.35
HUWE1-213ENST00000489876 MAP3K1Q13233 1512 aa12.88□□□□□ -0.35
HUWE1-213ENST00000489876 LMTK3Q96Q04 1460 aa12.88□□□□□ -0.35
HUWE1-213ENST00000489876 PLXNC1O60486 1568 aa12.88□□□□□ -0.35
HUWE1-213ENST00000489876 AGLP35573 1532 aa12.88□□□□□ -0.35
HUWE1-213ENST00000489876 PLEKHH2Q8IVE3 1493 aa12.87□□□□□ -0.35
HUWE1-213ENST00000489876 NLRP6P59044 892 aa12.87□□□□□ -0.35
HUWE1-213ENST00000489876 HSPA2P54652 639 aa12.86□□□□□ -0.35
HUWE1-213ENST00000489876 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
HUWE1-213ENST00000489876 CLTCQ00610 1675 aaKnown RBP12.85□□□□□ -0.35
HUWE1-213ENST00000489876 A2MP01023 1474 aa12.85□□□□□ -0.35
HUWE1-213ENST00000489876 EMP3P54852 163 aa12.84□□□□□ -0.35
HUWE1-213ENST00000489876 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.36
HUWE1-213ENST00000489876 MYOM3Q5VTT5 1437 aa12.83□□□□□ -0.36
HUWE1-213ENST00000489876 CCDC141Q6ZP82 1450 aa12.83□□□□□ -0.36
HUWE1-213ENST00000489876 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
HUWE1-213ENST00000489876 PREX1Q8TCU6 1659 aa12.81□□□□□ -0.36
HUWE1-213ENST00000489876 PPARGC1BQ86YN6 1023 aaKnown RBP12.81□□□□□ -0.36
HUWE1-213ENST00000489876 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
HUWE1-213ENST00000489876 FAM205CA6NFA0 338 aa12.79□□□□□ -0.36
HUWE1-213ENST00000489876 SETD1BQ9UPS6 1966 aaKnown RBP12.78□□□□□ -0.36
HUWE1-213ENST00000489876 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
HUWE1-213ENST00000489876 GGT6Q6P531 493 aa12.78□□□□□ -0.36
HUWE1-213ENST00000489876 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
HUWE1-213ENST00000489876 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
HUWE1-213ENST00000489876 RTEL1-TNFRSF6BF6WH68 1400 aa12.78□□□□□ -0.36
HUWE1-213ENST00000489876 PPP1R37O75864 691 aa12.77□□□□□ -0.37
HUWE1-213ENST00000489876 CFAP65Q6ZU64 1925 aaKnown RBP12.77□□□□□ -0.37
HUWE1-213ENST00000489876 MAST1Q9Y2H9 1570 aa12.77□□□□□ -0.37
HUWE1-213ENST00000489876 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
HUWE1-213ENST00000489876 DHX29Q7Z478 1369 aaKnown RBP12.76□□□□□ -0.37
HUWE1-213ENST00000489876 ABCC5O15440 1437 aa12.75□□□□□ -0.37
HUWE1-213ENST00000489876 DOK7Q18PE1 504 aa12.75□□□□□ -0.37
HUWE1-213ENST00000489876 FGD6Q6ZV73 1430 aa12.75□□□□□ -0.37
HUWE1-213ENST00000489876 MIA2Q96PC5 1412 aa12.75□□□□□ -0.37
HUWE1-213ENST00000489876 DNMT1P26358 1616 aaKnown RBP12.74□□□□□ -0.37
HUWE1-213ENST00000489876 MROH1Q8NDA8 1641 aa12.74□□□□□ -0.37
HUWE1-213ENST00000489876 ZMYM3Q14202 1370 aa12.74□□□□□ -0.37
HUWE1-213ENST00000489876 KIF3BO15066 747 aa12.74□□□□□ -0.37
HUWE1-213ENST00000489876 CEP152O94986 1710 aa12.74□□□□□ -0.37
HUWE1-213ENST00000489876 TCOF1Q13428 1488 aaKnown RBP12.73□□□□□ -0.37
HUWE1-213ENST00000489876 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
HUWE1-213ENST00000489876 KRTAP3-3Q9BYR6 98 aa12.72□□□□□ -0.37
HUWE1-213ENST00000489876 KRTAP3-2Q9BYR7 98 aa12.72□□□□□ -0.37
HUWE1-213ENST00000489876 DAPK1P53355 1430 aa12.71□□□□□ -0.37
HUWE1-213ENST00000489876 PTPRKQ15262 1439 aa12.71□□□□□ -0.37
HUWE1-213ENST00000489876 MYO3AQ8NEV4 1616 aa12.71□□□□□ -0.37
HUWE1-213ENST00000489876 RNF17Q9BXT8 1623 aaKnown RBP12.71□□□□□ -0.37
HUWE1-213ENST00000489876 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.37
HUWE1-213ENST00000489876 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.38
HUWE1-213ENST00000489876 TSPY4P0CV99 314 aa12.7□□□□□ -0.38
HUWE1-213ENST00000489876 TSPY10P0CW01 314 aa12.7□□□□□ -0.38
HUWE1-213ENST00000489876 FBXO31Q5XUX0 539 aaPredicted RBP12.7□□□□□ -0.38
HUWE1-213ENST00000489876 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
HUWE1-213ENST00000489876 KIF3CO14782 793 aa12.69□□□□□ -0.38
HUWE1-213ENST00000489876 HS6ST3Q8IZP7 471 aa12.69□□□□□ -0.38
HUWE1-213ENST00000489876 RRP7BPQ9NSQ0 103 aa12.69□□□□□ -0.38
HUWE1-213ENST00000489876 UHRF1BP1Q6BDS2 1440 aa12.69□□□□□ -0.38
HUWE1-213ENST00000489876 C2orf72A6NCS6 295 aa12.68□□□□□ -0.38
HUWE1-213ENST00000489876 RSPH4AQ5TD94 716 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms