RNA–Protein interactions for RNA: ENST00000489476.5

TPRKB-209, Transcript of TP53RK binding protein, human

TSL 5

Gene TPRKB, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-209	ENST00000489476	STRCP1	A6NGW2	1772 aa		13.65	□□□□□ -0.22
TPRKB-209	ENST00000489476	PRX	Q9BXM0	1461 aa		13.64	□□□□□ -0.23
TPRKB-209	ENST00000489476	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
TPRKB-209	ENST00000489476	RXRB	P28702	533 aa		13.64	□□□□□ -0.23
TPRKB-209	ENST00000489476	GGT6	Q6P531	493 aa		13.64	□□□□□ -0.23
TPRKB-209	ENST00000489476	KIF14	Q15058	1648 aa		13.64	□□□□□ -0.23
TPRKB-209	ENST00000489476	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.63	□□□□□ -0.23
TPRKB-209	ENST00000489476	DEPDC5	O75140	1603 aa		13.63	□□□□□ -0.23
TPRKB-209	ENST00000489476	MED14	O60244	1454 aa		13.62	□□□□□ -0.23
TPRKB-209	ENST00000489476	STK25	O00506	426 aa		13.62	□□□□□ -0.23
TPRKB-209	ENST00000489476	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.62	□□□□□ -0.23
TPRKB-209	ENST00000489476	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.62	□□□□□ -0.23
TPRKB-209	ENST00000489476	ABCC1	P33527	1531 aa		13.62	□□□□□ -0.23
TPRKB-209	ENST00000489476	CHGA	P10645	457 aa	Known RBP	13.61	□□□□□ -0.23
TPRKB-209	ENST00000489476	ASTL	Q6HA08	431 aa	Predicted RBP	13.61	□□□□□ -0.23
TPRKB-209	ENST00000489476	TMEM106C	Q9BVX2	250 aa		13.61	□□□□□ -0.23
TPRKB-209	ENST00000489476	TNR	Q92752	1358 aa		13.6	□□□□□ -0.23
TPRKB-209	ENST00000489476	FAM135A	Q9P2D6	1515 aa		13.6	□□□□□ -0.23
TPRKB-209	ENST00000489476	TTLL13P	A6NNM8	815 aa		13.6	□□□□□ -0.23
TPRKB-209	ENST00000489476	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.6	□□□□□ -0.23
TPRKB-209	ENST00000489476	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.6	□□□□□ -0.23
TPRKB-209	ENST00000489476	ROBO1	Q9Y6N7	1651 aa		13.59	□□□□□ -0.23
TPRKB-209	ENST00000489476	JCAD	Q9P266	1359 aa		13.59	□□□□□ -0.23
TPRKB-209	ENST00000489476	RBM33	Q96EV2	1170 aa	Known RBP	13.59	□□□□□ -0.23
TPRKB-209	ENST00000489476	DCBLD2	Q96PD2	775 aa		13.58	□□□□□ -0.24
TPRKB-209	ENST00000489476	CLIP1	P30622	1438 aa		13.57	□□□□□ -0.24
TPRKB-209	ENST00000489476	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.57	□□□□□ -0.24
TPRKB-209	ENST00000489476	ATMIN	O43313	823 aa	Predicted RBP	13.57	□□□□□ -0.24
TPRKB-209	ENST00000489476	STK24	Q9Y6E0	443 aa		13.57	□□□□□ -0.24
TPRKB-209	ENST00000489476	UGGT1	Q9NYU2	1555 aa		13.57	□□□□□ -0.24
TPRKB-209	ENST00000489476	PHLPP1	O60346	1717 aa		13.56	□□□□□ -0.24
TPRKB-209	ENST00000489476	CDC42BPB	Q9Y5S2	1711 aa		13.56	□□□□□ -0.24
TPRKB-209	ENST00000489476	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.55	□□□□□ -0.24
TPRKB-209	ENST00000489476	NUTM2E	B1AL46	878 aa	Predicted RBP	13.55	□□□□□ -0.24
TPRKB-209	ENST00000489476	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.55	□□□□□ -0.24
TPRKB-209	ENST00000489476	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.55	□□□□□ -0.24
TPRKB-209	ENST00000489476	SPAG9	O60271	1321 aa	Known RBP	13.55	□□□□□ -0.24
TPRKB-209	ENST00000489476	SETBP1	Q9Y6X0	1596 aa		13.54	□□□□□ -0.24
TPRKB-209	ENST00000489476	XIRP1	Q702N8	1843 aa	Known RBP	13.53	□□□□□ -0.24
TPRKB-209	ENST00000489476	BBX	Q8WY36	941 aa	Predicted RBP	13.53	□□□□□ -0.24
TPRKB-209	ENST00000489476	A2M	P01023	1474 aa		13.53	□□□□□ -0.24
TPRKB-209	ENST00000489476	LRRC9	Q6ZRR7	1453 aa		13.53	□□□□□ -0.24
TPRKB-209	ENST00000489476	ATN1	P54259	1190 aa	Predicted RBP	13.52	□□□□□ -0.25
TPRKB-209	ENST00000489476	SPATA31A6	Q5VVP1	1343 aa		13.52	□□□□□ -0.25
TPRKB-209	ENST00000489476	NLRP1	Q9C000	1473 aa		13.52	□□□□□ -0.25
TPRKB-209	ENST00000489476	SAMD9L	Q8IVG5	1584 aa		13.52	□□□□□ -0.25
TPRKB-209	ENST00000489476	PREX2	Q70Z35	1606 aa		13.51	□□□□□ -0.25
TPRKB-209	ENST00000489476	KDM5D	Q9BY66	1539 aa		13.51	□□□□□ -0.25
TPRKB-209	ENST00000489476	TRO	Q12816	1431 aa	Predicted RBP	13.51	□□□□□ -0.25
TPRKB-209	ENST00000489476	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.51	□□□□□ -0.25
TPRKB-209	ENST00000489476	PLXNC1	O60486	1568 aa		13.5	□□□□□ -0.25
TPRKB-209	ENST00000489476	IFFO2	Q5TF58	517 aa		13.5	□□□□□ -0.25
TPRKB-209	ENST00000489476	CABP2	Q9NPB3	220 aa		13.5	□□□□□ -0.25
TPRKB-209	ENST00000489476	TRIM35	Q9UPQ4	493 aa		13.5	□□□□□ -0.25
TPRKB-209	ENST00000489476	LRP6	O75581	1613 aa		13.49	□□□□□ -0.25
TPRKB-209	ENST00000489476	ATP7A	Q04656	1500 aa		13.49	□□□□□ -0.25
TPRKB-209	ENST00000489476	POTEI	P0CG38	1075 aa		13.48	□□□□□ -0.25
TPRKB-209	ENST00000489476	GOLGA2	Q08379	1002 aa		13.48	□□□□□ -0.25
TPRKB-209	ENST00000489476	PZP	P20742	1482 aa		13.48	□□□□□ -0.25
TPRKB-209	ENST00000489476	ATAD2	Q6PL18	1390 aa		13.47	□□□□□ -0.25
TPRKB-209	ENST00000489476	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.47	□□□□□ -0.25
TPRKB-209	ENST00000489476	ZC3H13	Q5T200	1668 aa	Known RBP	13.47	□□□□□ -0.25
TPRKB-209	ENST00000489476	SOX12	O15370	315 aa		13.46	□□□□□ -0.25
TPRKB-209	ENST00000489476	IER5L	Q5T953	404 aa		13.46	□□□□□ -0.25
TPRKB-209	ENST00000489476	MIA2	Q96PC5	1412 aa		13.46	□□□□□ -0.26
TPRKB-209	ENST00000489476	MKRN3	Q13064	507 aa	Known RBP	13.45	□□□□□ -0.26
TPRKB-209	ENST00000489476	RGS12	O14924	1447 aa		13.45	□□□□□ -0.26
TPRKB-209	ENST00000489476	TMEM94	Q12767	1356 aa		13.45	□□□□□ -0.26
TPRKB-209	ENST00000489476	EFCAB3	Q8N7B9	438 aa		13.44	□□□□□ -0.26
TPRKB-209	ENST00000489476	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.44	□□□□□ -0.26
TPRKB-209	ENST00000489476	FGD6	Q6ZV73	1430 aa		13.44	□□□□□ -0.26
TPRKB-209	ENST00000489476	SYCP2	Q9BX26	1530 aa		13.44	□□□□□ -0.26
TPRKB-209	ENST00000489476	ADGB	Q8N7X0	1667 aa		13.44	□□□□□ -0.26
TPRKB-209	ENST00000489476	AFF2	P51816	1311 aa		13.42	□□□□□ -0.26
TPRKB-209	ENST00000489476	RBM6	P78332	1123 aa	Known RBP	13.42	□□□□□ -0.26
TPRKB-209	ENST00000489476	COL16A1	Q07092	1604 aa	Predicted RBP	13.42	□□□□□ -0.26
TPRKB-209	ENST00000489476	SCAF11	Q99590	1463 aa	Known RBP	13.42	□□□□□ -0.26
TPRKB-209	ENST00000489476	INO80	Q9ULG1	1556 aa	Predicted RBP	13.41	□□□□□ -0.26
TPRKB-209	ENST00000489476	NKX1-1	Q15270	411 aa	Predicted RBP	13.41	□□□□□ -0.26
TPRKB-209	ENST00000489476	PROSER2	Q86WR7	435 aa	Predicted RBP	13.41	□□□□□ -0.26
TPRKB-209	ENST00000489476	PELP1	Q8IZL8	1130 aa	Known RBP	13.41	□□□□□ -0.26
TPRKB-209	ENST00000489476	SLC39A7	Q92504	469 aa		13.41	□□□□□ -0.26
TPRKB-209	ENST00000489476	RYDEN	Q9NUL5	291 aa	Known RBP	13.41	□□□□□ -0.26
TPRKB-209	ENST00000489476	MSH6	P52701	1360 aa		13.41	□□□□□ -0.26
TPRKB-209	ENST00000489476	WASHC2C	Q9Y4E1	1318 aa		13.4	□□□□□ -0.26
TPRKB-209	ENST00000489476	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
TPRKB-209	ENST00000489476	SLAIN2	Q9P270	581 aa		13.4	□□□□□ -0.26
TPRKB-209	ENST00000489476	SHPRH	Q149N8	1683 aa		13.39	□□□□□ -0.27
TPRKB-209	ENST00000489476	LRP5	O75197	1615 aa		13.39	□□□□□ -0.27
TPRKB-209	ENST00000489476	FMN1	Q68DA7	1419 aa		13.39	□□□□□ -0.27
TPRKB-209	ENST00000489476	C7	P10643	843 aa		13.38	□□□□□ -0.27
TPRKB-209	ENST00000489476	NGLY1	Q96IV0	654 aa		13.38	□□□□□ -0.27
TPRKB-209	ENST00000489476	CDC42BPA	Q5VT25	1732 aa		13.38	□□□□□ -0.27
TPRKB-209	ENST00000489476	YY1	P25490	414 aa		13.37	□□□□□ -0.27
TPRKB-209	ENST00000489476	NLRP6	P59044	892 aa		13.37	□□□□□ -0.27
TPRKB-209	ENST00000489476	TXNDC2	Q86VQ3	553 aa		13.37	□□□□□ -0.27
TPRKB-209	ENST00000489476	MFRP	Q9BY79	579 aa		13.37	□□□□□ -0.27
TPRKB-209	ENST00000489476	QTRT2	Q9H974	415 aa	Known RBP	13.37	□□□□□ -0.27
TPRKB-209	ENST00000489476	EID1	Q9Y6B2	187 aa		13.37	□□□□□ -0.27
TPRKB-209	ENST00000489476	MAP3K1	Q13233	1512 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms