RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 ERBINQ96RT1 1412 aa7.76□□□□□ -1.17
PRDM1-207ENST00000489365 ZNF335Q9H4Z2 1342 aaPredicted RBP7.76□□□□□ -1.17
PRDM1-207ENST00000489365 UGGT1Q9NYU2 1555 aa7.76□□□□□ -1.17
PRDM1-207ENST00000489365 TCOF1Q13428 1488 aaKnown RBP7.75□□□□□ -1.17
PRDM1-207ENST00000489365 RNF17Q9BXT8 1623 aaKnown RBP7.75□□□□□ -1.17
PRDM1-207ENST00000489365 DISP3Q9P2K9 1392 aa7.75□□□□□ -1.17
PRDM1-207ENST00000489365 C19orf67A6NJJ6 358 aa7.75□□□□□ -1.17
PRDM1-207ENST00000489365 TOM1O60784 492 aa7.75□□□□□ -1.17
PRDM1-207ENST00000489365 NUBP1P53384 320 aa7.75□□□□□ -1.17
PRDM1-207ENST00000489365 FBXO31Q5XUX0 539 aaPredicted RBP7.75□□□□□ -1.17
PRDM1-207ENST00000489365 RRP7BPQ9NSQ0 103 aa7.75□□□□□ -1.17
PRDM1-207ENST00000489365 EID1Q9Y6B2 187 aa7.75□□□□□ -1.17
PRDM1-207ENST00000489365 DNMT1P26358 1616 aaKnown RBP7.74□□□□□ -1.17
PRDM1-207ENST00000489365 PTPN23Q9H3S7 1636 aa7.74□□□□□ -1.17
PRDM1-207ENST00000489365 ABCC3O15438 1527 aa7.74□□□□□ -1.17
PRDM1-207ENST00000489365 FAM50AQ14320 339 aaKnown RBP7.74□□□□□ -1.17
PRDM1-207ENST00000489365 POLR1AO95602 1720 aaPredicted RBP7.74□□□□□ -1.17
PRDM1-207ENST00000489365 LTBP4Q8N2S1 1624 aa7.74□□□□□ -1.17
PRDM1-207ENST00000489365 CPS1P31327 1500 aa7.73□□□□□ -1.17
PRDM1-207ENST00000489365 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.73□□□□□ -1.17
PRDM1-207ENST00000489365 DAPK1P53355 1430 aa7.73□□□□□ -1.17
PRDM1-207ENST00000489365 FGD6Q6ZV73 1430 aa7.73□□□□□ -1.17
PRDM1-207ENST00000489365 NPHP4O75161 1426 aaPredicted RBP7.72□□□□□ -1.17
PRDM1-207ENST00000489365 ERVK-7P63135 1459 aa7.72□□□□□ -1.17
PRDM1-207ENST00000489365 ABCC5O15440 1437 aa7.71□□□□□ -1.17
PRDM1-207ENST00000489365 CROCC2H7BZ55 1655 aa7.71□□□□□ -1.18
PRDM1-207ENST00000489365 CHIC2Q9UKJ5 165 aa7.71□□□□□ -1.18
PRDM1-207ENST00000489365 PRDM15P57071 1507 aaPredicted RBP7.71□□□□□ -1.18
PRDM1-207ENST00000489365 SPATA31D1Q6ZQQ2 1576 aa7.71□□□□□ -1.18
PRDM1-207ENST00000489365 DEPDC5O75140 1603 aa7.7□□□□□ -1.18
PRDM1-207ENST00000489365 HDGFP51858 240 aaKnown RBP7.7□□□□□ -1.18
PRDM1-207ENST00000489365 PIP4K2BP78356 416 aa7.7□□□□□ -1.18
PRDM1-207ENST00000489365 TXNDC2Q86VQ3 553 aa7.7□□□□□ -1.18
PRDM1-207ENST00000489365 BCANQ96GW7 911 aa7.7□□□□□ -1.18
PRDM1-207ENST00000489365 ARHGAP31Q2M1Z3 1444 aa7.69□□□□□ -1.18
PRDM1-207ENST00000489365 SCAF11Q99590 1463 aaKnown RBP7.69□□□□□ -1.18
PRDM1-207ENST00000489365 RASEFQ8IZ41 740 aa7.69□□□□□ -1.18
PRDM1-207ENST00000489365 PLSCR2Q9NRY7 297 aa7.69□□□□□ -1.18
PRDM1-207ENST00000489365 IQGAP1P46940 1657 aa7.69□□□□□ -1.18
PRDM1-207ENST00000489365 CEP152O94986 1710 aa7.69□□□□□ -1.18
PRDM1-207ENST00000489365 MED14O60244 1454 aa7.68□□□□□ -1.18
PRDM1-207ENST00000489365 NEURL4Q96JN8 1562 aa7.67□□□□□ -1.18
PRDM1-207ENST00000489365 PPP1R15AO75807 674 aaPredicted RBP7.67□□□□□ -1.18
PRDM1-207ENST00000489365 SLC52A1Q9NWF4 448 aa7.67□□□□□ -1.18
PRDM1-207ENST00000489365 CIZ1Q9ULV3 898 aaPredicted RBP7.67□□□□□ -1.18
PRDM1-207ENST00000489365 CFAP65Q6ZU64 1925 aaKnown RBP7.67□□□□□ -1.18
PRDM1-207ENST00000489365 ANKRD50Q9ULJ7 1429 aa7.67□□□□□ -1.18
PRDM1-207ENST00000489365 MROH1Q8NDA8 1641 aa7.67□□□□□ -1.18
PRDM1-207ENST00000489365 GABBR2O75899 941 aa7.66□□□□□ -1.18
PRDM1-207ENST00000489365 GSE1Q14687 1217 aa7.66□□□□□ -1.18
PRDM1-207ENST00000489365 FAM212AQ96EL1 285 aa7.66□□□□□ -1.18
PRDM1-207ENST00000489365 RPRD2Q5VT52 1461 aaKnown RBP7.66□□□□□ -1.18
PRDM1-207ENST00000489365 SYNMO15061 1565 aa7.66□□□□□ -1.18
PRDM1-207ENST00000489365 ADGRL2O95490 1459 aa7.65□□□□□ -1.18
PRDM1-207ENST00000489365 DCAF8Q5TAQ9 597 aa7.65□□□□□ -1.18
PRDM1-207ENST00000489365 EFCAB6Q5THR3 1501 aa7.65□□□□□ -1.18
PRDM1-207ENST00000489365 LMTK2Q8IWU2 1503 aa7.65□□□□□ -1.18
PRDM1-207ENST00000489365 UBR1Q8IWV7 1749 aa7.65□□□□□ -1.18
PRDM1-207ENST00000489365 TMEM2Q9UHN6 1383 aa7.65□□□□□ -1.18
PRDM1-207ENST00000489365 VWDEQ8N2E2 1590 aa7.64□□□□□ -1.19
PRDM1-207ENST00000489365 SLIT1O75093 1534 aa7.64□□□□□ -1.19
PRDM1-207ENST00000489365 CHGAP10645 457 aaKnown RBP7.64□□□□□ -1.19
PRDM1-207ENST00000489365 KDM5AP29375 1690 aaKnown RBP7.63□□□□□ -1.19
PRDM1-207ENST00000489365 ROCK1Q13464 1354 aa7.63□□□□□ -1.19
PRDM1-207ENST00000489365 SOCS7O14512 581 aa7.63□□□□□ -1.19
PRDM1-207ENST00000489365 HSPA1LP34931 641 aa7.63□□□□□ -1.19
PRDM1-207ENST00000489365 ITGAEP38570 1179 aa7.63□□□□□ -1.19
PRDM1-207ENST00000489365 IDI1Q13907 227 aa7.63□□□□□ -1.19
PRDM1-207ENST00000489365 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.63□□□□□ -1.19
PRDM1-207ENST00000489365 ARHGAP23Q9P227 1491 aa7.62□□□□□ -1.19
PRDM1-207ENST00000489365 TSPYL2Q9H2G4 693 aaPredicted RBP7.62□□□□□ -1.19
PRDM1-207ENST00000489365 PIK3C2BO00750 1634 aa7.62□□□□□ -1.19
PRDM1-207ENST00000489365 ADGRB3O60242 1522 aa7.62□□□□□ -1.19
PRDM1-207ENST00000489365 ECM2O94769 699 aaPredicted RBP7.61□□□□□ -1.19
PRDM1-207ENST00000489365 LTKP29376 864 aa7.61□□□□□ -1.19
PRDM1-207ENST00000489365 C14orf37Q86TY3 774 aa7.61□□□□□ -1.19
PRDM1-207ENST00000489365 PROSER2Q86WR7 435 aaPredicted RBP7.61□□□□□ -1.19
PRDM1-207ENST00000489365 LRRC7Q96NW7 1537 aa7.61□□□□□ -1.19
PRDM1-207ENST00000489365 NOS1P29475 1434 aa7.61□□□□□ -1.19
PRDM1-207ENST00000489365 TET3O43151 1660 aa7.6□□□□□ -1.19
PRDM1-207ENST00000489365 MSH6P52701 1360 aa7.6□□□□□ -1.19
PRDM1-207ENST00000489365 KCNA6P17658 529 aa7.6□□□□□ -1.19
PRDM1-207ENST00000489365 SLC26A8Q96RN1 970 aa7.6□□□□□ -1.19
PRDM1-207ENST00000489365 NUP155O75694 1391 aa7.59□□□□□ -1.19
PRDM1-207ENST00000489365 LHX8Q68G74 356 aa7.59□□□□□ -1.19
PRDM1-207ENST00000489365 GCC2Q8IWJ2 1684 aa7.59□□□□□ -1.19
PRDM1-207ENST00000489365 NKTRP30414 1462 aaKnown RBP7.58□□□□□ -1.2
PRDM1-207ENST00000489365 CD44P16070 742 aaKnown RBP7.58□□□□□ -1.2
PRDM1-207ENST00000489365 UNC13BO14795 1591 aa7.58□□□□□ -1.2
PRDM1-207ENST00000489365 TMEM94Q12767 1356 aa7.58□□□□□ -1.2
PRDM1-207ENST00000489365 PLEKHG1Q9ULL1 1385 aa7.58□□□□□ -1.2
PRDM1-207ENST00000489365 PAK3O75914 559 aaPredicted RBP7.57□□□□□ -1.2
PRDM1-207ENST00000489365 CHRM1P11229 460 aaPredicted RBP7.57□□□□□ -1.2
PRDM1-207ENST00000489365 CLCN6P51797 869 aa7.57□□□□□ -1.2
PRDM1-207ENST00000489365 ZNF326Q5BKZ1 582 aaKnown RBP7.57□□□□□ -1.2
PRDM1-207ENST00000489365 ILDR2Q71H61 639 aa7.57□□□□□ -1.2
PRDM1-207ENST00000489365 CCDC61Q9Y6R9 512 aa7.57□□□□□ -1.2
PRDM1-207ENST00000489365 RIMS2Q9UQ26 1411 aa7.57□□□□□ -1.2
PRDM1-207ENST00000489365 MED1Q15648 1581 aaPredicted RBP7.57□□□□□ -1.2
PRDM1-207ENST00000489365 ATF3P18847 181 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms